Click here to switch to the map view.

The map label for this gene is dnaB [H]

Identifier: 161524577

GI number: 161524577

Start: 1545137

End: 1546519

Strand: Direct

Name: dnaB [H]

Synonym: Bmul_1404

Alternate gene names: 161524577

Gene position: 1545137-1546519 (Clockwise)

Preceding gene: 161524576

Following gene: 161524578

Centisome position: 44.81

GC content: 64.35

Gene sequence:

>1383_bases
ATGAACGCGCCGCAAGATCCACAAATCGAATCGCTGAAAGTCCCGCCGCACTCGGTCGAAGCCGAGCAGTCGGTGCTGGG
CGGCCTGTTGCTCGACAACGCGGCATGGGACCGGATTGCCGATTTCCTGTCGCAGAGCGACTTCTATCGTTACGACCACC
GGATCATCTTCGAGCATATCGGCCGGCTGATCGCAGCCACGCGTCCGGCCGACGTCGTGACGGTGTTCGAAGCGCTGACG
ACGTCCGGCAAGGCCGACGAAGTTGGCGGCCTCGCCTATCTGAACGCGCTCGCGCAGAACACGCCGAGTGCGGCGAACAT
CCGCCGCTATGCGGAGATCGTGCGCGACCGTGCGGTGCTGCGCCGGCTCGTGTCGGTCGCCGACGAAATCTCGGCCGATG
CGTTCAATCCGCAGGGCAAGGAAGTCCGCCAGCTGCTCGACGAAGCCGAAGCGAAGGTGTTCTCGATCGCCGAAGAGGGC
GCACGCGGCAATCAGGGCTTTCTCGAGATCGGTCCGCTGCTCACGCAGGTCGTCGAGCGGATCGACACGCTCTATCACAC
CGCGAACCCGAGCGACGTCACCGGCACGCCGACCGGCTTCGTCGATCTCGATCGCATGACGTCGGGCATGCACGGCGGCG
AGCTGATCATCGTCGCCGGGCGGCCGTCGATGGGCAAGACCGCGTTCTCGATGAACATCGGCGAATACGTCGCGGTCGAG
TACGGGCTGCCGGTCGCGGTGTTCTCGATGGAAATGCCGGGCACGCAGCTCGTGATGCGGATGCTCGGCTCGATCGGCCG
GCTCGATCAGCACCGCATGCGTACGGGCCGCCTCACCGACGAGGATTGGCCGAAGCTCACGCACGCCGTGCAGAAGATGA
GCGAAGCGCAGCTGTTCATCGACGAGACGGGCGGCCTGAACCCGATGGAACTGCGCTCGCGCGCGCGGCGTCTCGCGCGG
CAGTGCGGCAAGCTCGGGCTCATCATCGTCGACTATCTGCAGCTGATGTCGGGCTCGTCGCAGGGCGAAAACCGCGCCAC
CGAAATCTCGGAAATCTCGCGCTCGCTGAAGAGCCTCGCGAAGGAACTCGACGTGCCGGTGATCGCGCTGTCGCAGCTGA
ACCGCGGCCTCGAACAGCGTCCGAACAAGCGCCCGGTGATGTCCGACCTGCGCGAATCGGGCGCTATCGAACAGGACGCG
GACGTGATCCTGTTCATTTATCGCGACGAAGTCTACAATCCGGACAGCCCGGACAAGGGGACGGCCGAGATCATCATCGG
CAAGCAGCGTAACGGCCCGATCGGTCCCGTTCGGCTCACGTTCCTGGGCCAATACACGAAGTTCGACAACTTTGCAGGGG
CGCAGAACTTCTACGGCGAGTAA

Upstream 100 bases:

>100_bases
CAGGGGCAGGCGCCCGGGCAACCGGGGCCTGCCTTTTTTGTTGGCCGATCGCCGGCGACGAACTGGCGTCGCGGCCCGCA
ATTCGCGATAATCCCAACCC

Downstream 100 bases:

>100_bases
CGCCGGATGTAAACCCCTATTTAGCCAAACGTTGTATCCCGTCCGGCGCGCGCGCATGCGCGCGTCGCGCCGTCACCGGA
AACGGTACAATGTCGCCCGT

Product: replicative DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MNAPQDPQIESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQSDFYRYDHRIIFEHIGRLIAATRPADVVTVFEALT
TSGKADEVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADAFNPQGKEVRQLLDEAEAKVFSIAEEG
ARGNQGFLEIGPLLTQVVERIDTLYHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVE
YGLPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRARRLAR
QCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGPVRLTFLGQYTKFDNFAGAQNFYGE

Sequences:

>Translated_460_residues
MNAPQDPQIESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQSDFYRYDHRIIFEHIGRLIAATRPADVVTVFEALT
TSGKADEVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADAFNPQGKEVRQLLDEAEAKVFSIAEEG
ARGNQGFLEIGPLLTQVVERIDTLYHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVE
YGLPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRARRLAR
QCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGPVRLTFLGQYTKFDNFAGAQNFYGE
>Mature_460_residues
MNAPQDPQIESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQSDFYRYDHRIIFEHIGRLIAATRPADVVTVFEALT
TSGKADEVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVLRRLVSVADEISADAFNPQGKEVRQLLDEAEAKVFSIAEEG
ARGNQGFLEIGPLLTQVVERIDTLYHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVE
YGLPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFIDETGGLNPMELRSRARRLAR
QCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLAKELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGPVRLTFLGQYTKFDNFAGAQNFYGE

Specific function: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with dnaC protein, primase, and other prepriming proteins [

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SF4 helicase domain [H]

Homologues:

Organism=Escherichia coli, GI1790486, Length=453, Percent_Identity=56.2913907284768, Blast_Score=510, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007692
- InterPro:   IPR007694
- InterPro:   IPR007693
- InterPro:   IPR016136 [H]

Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 50694; Mature: 50694

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPQDPQIESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQSDFYRYDHRIIFEHI
CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GRLIAATRPADVVTVFEALTTSGKADEVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVL
HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RRLVSVADEISADAFNPQGKEVRQLLDEAEAKVFSIAEEGARGNQGFLEIGPLLTQVVER
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IDTLYHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVE
HHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEE
YGLPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFI
CCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEE
DETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLA
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG
HHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCC
TAEIIIGKQRNGPIGPVRLTFLGQYTKFDNFAGAQNFYGE
CEEEEEECCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPQDPQIESLKVPPHSVEAEQSVLGGLLLDNAAWDRIADFLSQSDFYRYDHRIIFEHI
CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GRLIAATRPADVVTVFEALTTSGKADEVGGLAYLNALAQNTPSAANIRRYAEIVRDRAVL
HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RRLVSVADEISADAFNPQGKEVRQLLDEAEAKVFSIAEEGARGNQGFLEIGPLLTQVVER
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
IDTLYHTANPSDVTGTPTGFVDLDRMTSGMHGGELIIVAGRPSMGKTAFSMNIGEYVAVE
HHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCEEEEE
YGLPVAVFSMEMPGTQLVMRMLGSIGRLDQHRMRTGRLTDEDWPKLTHAVQKMSEAQLFI
CCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEE
DETGGLNPMELRSRARRLARQCGKLGLIIVDYLQLMSGSSQGENRATEISEISRSLKSLA
ECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KELDVPVIALSQLNRGLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKG
HHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCC
TAEIIIGKQRNGPIGPVRLTFLGQYTKFDNFAGAQNFYGE
CEEEEEECCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]