Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is 161523792
Identifier: 161523792
GI number: 161523792
Start: 670854
End: 671681
Strand: Reverse
Name: 161523792
Synonym: Bmul_0612
Alternate gene names: NA
Gene position: 671681-670854 (Counterclockwise)
Preceding gene: 161523793
Following gene: 161523791
Centisome position: 19.48
GC content: 69.2
Gene sequence:
>828_bases ATGACGCAAGCCTTCCATTTCTCGCTGAACCGGATCTGCGCGCCGCACATCCCGTTCGATCGCTATGTCGCGCTGTGCCG GCAGCTCGGCATCGACGCGATCGAGATCCGCAACGATCTCGACGGCGCGGAACTCGCCGACGGCACGCCGGCCGCCGCGA TCCGTGCGACGGCCGAAGCCGCCGGCGTGACGATCCTGACGATCAACGCGCTGCAGCGCTTCGACCGGTGGGACGCAGCG CGCGCGGACGAAGCGACGCTGCTCGCCGACTACGCCGCGCAATGCGGCGCACGCGCGCTGGTGCTGTGTCCGACCAACAG CCGCGACGATGCGCGCGATGCCGAGACGCGACACGCCGATCTCGTCAACGCGCTGCGCGCATTGAAGCCGATCCTCGAAG CGCGCGGGCTGCTCGGCTTCATCGAGCCGCTCGGCTTCGAAGAATGCGCGCTGCGCCGCAAGTCGGACGCGGTCAAGGCG ATCTACGCAGCGGCCGGCGAAGCGGTGTTCCGTCTCGTGCACGACACGTTCCATCATCACCTCGCCGGCGAAGCGATCTT CTTCCCCAATCTGACGGGACTCGTTCATCTGTCGGGCGTCGAGGACGACGACCTGCCGGTCGAGCGGATGCGCGACGGCC ATCGTGTGCTCGTCGGCGGCGCGGACCGGCTCGGCAACGTGCGGCAAGTGCGCGAGCTGCTTGCGCGCGACTACCGCGGC GCGCTGTCGTTCGAGCCGTTCGCCGCCGAGATCGCGCAGGCCGACGACATCGACGCGCGGCTGCGCGCGAGCATCGACTA CGTGCAGGGCGAACTCGAGCGCCGCTGA
Upstream 100 bases:
>100_bases ACGCACTCGCCGCGACGCCGGCCGATACGCACGGCGATGCGGCCGCGCACGACGTCATCCGTTTCGCTCACGATTCCGTT CGACACCAGAGGACCGCACG
Downstream 100 bases:
>100_bases ACATGCGCCCATGCGCGCAACCGACAAGACAAGACACGACGGGAGAACACGATGATCGAATTCGCACTGTTCGGCGCCGG CCGAATCGGCAAGATCCACG
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; IolI Protein; Cytoplasmic Protein; Myo-Inositol Catabolism Protein; Sugar Epimerase; Sugar Epimerase Protein; Xylose Isomerase-Like TIM Barrel; Protein IolI; Protein Implicated IN Myo-Inositol Catabolique Pathway; Protein Implicated In Myo-Inositol Catabolique Pathway; IolL Protein; Myo-Inositol Catabolism Protein IolI
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTQAFHFSLNRICAPHIPFDRYVALCRQLGIDAIEIRNDLDGAELADGTPAAAIRATAEAAGVTILTINALQRFDRWDAA RADEATLLADYAAQCGARALVLCPTNSRDDARDAETRHADLVNALRALKPILEARGLLGFIEPLGFEECALRRKSDAVKA IYAAAGEAVFRLVHDTFHHHLAGEAIFFPNLTGLVHLSGVEDDDLPVERMRDGHRVLVGGADRLGNVRQVRELLARDYRG ALSFEPFAAEIAQADDIDARLRASIDYVQGELERR
Sequences:
>Translated_275_residues MTQAFHFSLNRICAPHIPFDRYVALCRQLGIDAIEIRNDLDGAELADGTPAAAIRATAEAAGVTILTINALQRFDRWDAA RADEATLLADYAAQCGARALVLCPTNSRDDARDAETRHADLVNALRALKPILEARGLLGFIEPLGFEECALRRKSDAVKA IYAAAGEAVFRLVHDTFHHHLAGEAIFFPNLTGLVHLSGVEDDDLPVERMRDGHRVLVGGADRLGNVRQVRELLARDYRG ALSFEPFAAEIAQADDIDARLRASIDYVQGELERR >Mature_274_residues TQAFHFSLNRICAPHIPFDRYVALCRQLGIDAIEIRNDLDGAELADGTPAAAIRATAEAAGVTILTINALQRFDRWDAAR ADEATLLADYAAQCGARALVLCPTNSRDDARDAETRHADLVNALRALKPILEARGLLGFIEPLGFEECALRRKSDAVKAI YAAAGEAVFRLVHDTFHHHLAGEAIFFPNLTGLVHLSGVEDDDLPVERMRDGHRVLVGGADRLGNVRQVRELLARDYRGA LSFEPFAAEIAQADDIDARLRASIDYVQGELERR
Specific function: Unknown
COG id: COG4130
COG function: function code G; Predicted sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30190; Mature: 30059
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAFHFSLNRICAPHIPFDRYVALCRQLGIDAIEIRNDLDGAELADGTPAAAIRATAEA CCCCCEEHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHH AGVTILTINALQRFDRWDAARADEATLLADYAAQCGARALVLCPTNSRDDARDAETRHAD CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH LVNALRALKPILEARGLLGFIEPLGFEECALRRKSDAVKAIYAAAGEAVFRLVHDTFHHH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGEAIFFPNLTGLVHLSGVEDDDLPVERMRDGHRVLVGGADRLGNVRQVRELLARDYRG HCCCEEECCCCCEEEEECCCCCCCCCHHHHCCCCEEEEECCHHCCCHHHHHHHHHHHHCC ALSFEPFAAEIAQADDIDARLRASIDYVQGELERR CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQAFHFSLNRICAPHIPFDRYVALCRQLGIDAIEIRNDLDGAELADGTPAAAIRATAEA CCCCEEHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHH AGVTILTINALQRFDRWDAARADEATLLADYAAQCGARALVLCPTNSRDDARDAETRHAD CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH LVNALRALKPILEARGLLGFIEPLGFEECALRRKSDAVKAIYAAAGEAVFRLVHDTFHHH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGEAIFFPNLTGLVHLSGVEDDDLPVERMRDGHRVLVGGADRLGNVRQVRELLARDYRG HCCCEEECCCCCEEEEECCCCCCCCCHHHHCCCCEEEEECCHHCCCHHHHHHHHHHHHCC ALSFEPFAAEIAQADDIDARLRASIDYVQGELERR CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA