Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
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Accession | NC_010084 |
Length | 3,448,466 |
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The map label for this gene is yjcE [H]
Identifier: 161523538
GI number: 161523538
Start: 395477
End: 397372
Strand: Reverse
Name: yjcE [H]
Synonym: Bmul_0358
Alternate gene names: 161523538
Gene position: 397372-395477 (Counterclockwise)
Preceding gene: 161523541
Following gene: 161523536
Centisome position: 11.52
GC content: 68.09
Gene sequence:
>1896_bases ATGAACCCTCGGTTTATCCGGCCTGCGCCGGACGGCGAGCAAGCATCAAGCAAGCTCCGTGCAAGCGTCGATCACGCGCG CGCCGCACGGTGCACGCGGTGCTGCACCAGCACGGCGCAACGCAGTTGCACCGTTTGCGTGCATCCGCACCGGCGCACCG GAGCGCAGCGCTCGCGCGAGCACGCTACACTCCGTACGGTCGTTTCATTCCCTGCCTTTGCCGTATCGATGGAAATCGTC TTCACCGTCCTCATCCTGCTGCTCACCGTCGCGCTGTCCGGCGCGCTCACGCGCGTGTTACCGTTGCGGCTGCCGCTGCC GCTGATGCAGATCGCCTTCGGCGCCGCGCTCGCGTGGCCGCAACTGAACCTCCATGTGACGTTCGACCCTGAAATCTTCA TGCTGCTGTTCATTCCGCCGCTGCTGTTCGCAGACGGCTGGCGGATTCCGAAACGCGAGCTGTATCTGCAGCGGCGCGCG ATCCTGATGCTCGCGTTCGGCCTCGTGTTCATGACGGTACTCGCCGTCGGCTACTTCGCGCATTGGCTGATTCCCGAGTT GCCGCTGCCGATCGCGTTCGCGCTCGCGGCCGTGCTCTCGCCGACCGATGCCGTCGCGCTGTCGGGCATCGCCGGAAAGG GCCGGATCCCGCCGCAACTGATGCACATCCTCGAAGGCGAGGCGCTGATGAACGACGCGTCGGGCCTCGTCGCGCTGAAG TTCGCGATCGCCGCCGCGCTCACCGGCGTGTTCTCGCTGCGCGACGCGTCGTTGACGTTCGTCGTCGTCGCGGCCGGCGG GCTCGCGACGGGCGCGGCCGTGTCCTGGCTGTTCAGCGCGCTGTCGACGCGCTTCCTCAATGCCGAGCAGGAAGGCGATC CGGCGCCCGGCATCGTGATGACGCTGCTCGTGCCGTTCGCCGCGTACCTGTTCGCCGAGCACTTCGATCTGTCCGGCGTG CTCGCGGCCGTGTCGGCCGGGATGATGATGAATTACACGAGCTTCTCGCGCAAAAGCACGGTCGCGTCGCGCGTGCGCGC GGAAAGCACGTGGGCGATGATCGAGTTCGTGTTCAACGGCATGGTGTTCATCATGCTCGGGCTGCAGCTGCCGCACATCA TCGGCCGCGCGCTCGTCGAGGCACACCATACGAGCGACGCGCTGGTCGGCCGCATGATCTTCAACGTGGGCGCGATGATG CTCTCGCTGTATGCGATCCGCTTTCTGTGGGTATGGCTGCTGCGCTGGTTCGCGAGCCGCCGCGCAGCACGGCAGGGCCT CGCGGGCACGATGGCCGGCGTGCGCACGATCGCGGTGATGACGGTCGGCGGCGTGCGCGGCGCGGTCACGCTCGCCGGCG TGCTGTCGATTCCGGTCGCGCTGTCGAGCGGCGCGCCGCTGCCGGGCCGCGATACCGCGATCTTCATCGCGTCGGCCGTG ATTCTCGGTTCGCTGATCGTCGCGGTGATCGGCCTGCCGCTGCTGCTGCGCGGCGTGCGCACGACGCGCAATCCGCTCGC CGGCGAGGAACGCGCGGCGCGCGCCGCGGCCGCTCAAGCCGCGATCCGCGCGATCGACGCGTCGCACGACGCGATCTCGG CCGAACTCGACGAATCGGGCGCCGCGCGCTGCGCGGACATCTCCGCGCGCGTGATGGATCAGTATCGGCGCCGGCTCGCC GCGCTCGCCGAGGACGGCCCGACGCCGCGCGCCGAAGCGAAGCAGGCGGAAACGATGGAGCTGCAGATGCGGATCGCGGC CGTGCGCGCGGAGCGCTCGATGCTGTATCGGCTGCGTACCGAAAGCAAGATCTCCGACGAGACGCTGACGAAGCTGATCC GCGAAATCGATCTGTCGGAAACCGCGCTGTCGACGCGCAAGAAAGGAATCGTCTGA
Upstream 100 bases:
>100_bases GCTCCTGTTGCTCGGTCGTCATGCGTTCCTCCTGAAATCGGTCTGCATCGGCAACGCGGCGGCTGACGAACCGGACGGCG CGCGGCATCGGCCCATGTCG
Downstream 100 bases:
>100_bases ACGGCGACGGGCGGCACGCGCCGCGCCCGCCATGAAAAAACGGCGATGCCGCACGCGCGCATCGCCGTTTTTCGTTTGCG GCGCGCCGGCGCCGCGCGCC
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 631
Protein sequence:
>631_residues MNPRFIRPAPDGEQASSKLRASVDHARAARCTRCCTSTAQRSCTVCVHPHRRTGAQRSREHATLRTVVSFPAFAVSMEIV FTVLILLLTVALSGALTRVLPLRLPLPLMQIAFGAALAWPQLNLHVTFDPEIFMLLFIPPLLFADGWRIPKRELYLQRRA ILMLAFGLVFMTVLAVGYFAHWLIPELPLPIAFALAAVLSPTDAVALSGIAGKGRIPPQLMHILEGEALMNDASGLVALK FAIAAALTGVFSLRDASLTFVVVAAGGLATGAAVSWLFSALSTRFLNAEQEGDPAPGIVMTLLVPFAAYLFAEHFDLSGV LAAVSAGMMMNYTSFSRKSTVASRVRAESTWAMIEFVFNGMVFIMLGLQLPHIIGRALVEAHHTSDALVGRMIFNVGAMM LSLYAIRFLWVWLLRWFASRRAARQGLAGTMAGVRTIAVMTVGGVRGAVTLAGVLSIPVALSSGAPLPGRDTAIFIASAV ILGSLIVAVIGLPLLLRGVRTTRNPLAGEERAARAAAAQAAIRAIDASHDAISAELDESGAARCADISARVMDQYRRRLA ALAEDGPTPRAEAKQAETMELQMRIAAVRAERSMLYRLRTESKISDETLTKLIREIDLSETALSTRKKGIV
Sequences:
>Translated_631_residues MNPRFIRPAPDGEQASSKLRASVDHARAARCTRCCTSTAQRSCTVCVHPHRRTGAQRSREHATLRTVVSFPAFAVSMEIV FTVLILLLTVALSGALTRVLPLRLPLPLMQIAFGAALAWPQLNLHVTFDPEIFMLLFIPPLLFADGWRIPKRELYLQRRA ILMLAFGLVFMTVLAVGYFAHWLIPELPLPIAFALAAVLSPTDAVALSGIAGKGRIPPQLMHILEGEALMNDASGLVALK FAIAAALTGVFSLRDASLTFVVVAAGGLATGAAVSWLFSALSTRFLNAEQEGDPAPGIVMTLLVPFAAYLFAEHFDLSGV LAAVSAGMMMNYTSFSRKSTVASRVRAESTWAMIEFVFNGMVFIMLGLQLPHIIGRALVEAHHTSDALVGRMIFNVGAMM LSLYAIRFLWVWLLRWFASRRAARQGLAGTMAGVRTIAVMTVGGVRGAVTLAGVLSIPVALSSGAPLPGRDTAIFIASAV ILGSLIVAVIGLPLLLRGVRTTRNPLAGEERAARAAAAQAAIRAIDASHDAISAELDESGAARCADISARVMDQYRRRLA ALAEDGPTPRAEAKQAETMELQMRIAAVRAERSMLYRLRTESKISDETLTKLIREIDLSETALSTRKKGIV >Mature_631_residues MNPRFIRPAPDGEQASSKLRASVDHARAARCTRCCTSTAQRSCTVCVHPHRRTGAQRSREHATLRTVVSFPAFAVSMEIV FTVLILLLTVALSGALTRVLPLRLPLPLMQIAFGAALAWPQLNLHVTFDPEIFMLLFIPPLLFADGWRIPKRELYLQRRA ILMLAFGLVFMTVLAVGYFAHWLIPELPLPIAFALAAVLSPTDAVALSGIAGKGRIPPQLMHILEGEALMNDASGLVALK FAIAAALTGVFSLRDASLTFVVVAAGGLATGAAVSWLFSALSTRFLNAEQEGDPAPGIVMTLLVPFAAYLFAEHFDLSGV LAAVSAGMMMNYTSFSRKSTVASRVRAESTWAMIEFVFNGMVFIMLGLQLPHIIGRALVEAHHTSDALVGRMIFNVGAMM LSLYAIRFLWVWLLRWFASRRAARQGLAGTMAGVRTIAVMTVGGVRGAVTLAGVLSIPVALSSGAPLPGRDTAIFIASAV ILGSLIVAVIGLPLLLRGVRTTRNPLAGEERAARAAAAQAAIRAIDASHDAISAELDESGAARCADISARVMDQYRRRLA ALAEDGPTPRAEAKQAETMELQMRIAAVRAERSMLYRLRTESKISDETLTKLIREIDLSETALSTRKKGIV
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Homo sapiens, GI5454070, Length=291, Percent_Identity=23.3676975945017, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI110227626, Length=267, Percent_Identity=24.7191011235955, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI294997330, Length=267, Percent_Identity=24.7191011235955, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI27734935, Length=268, Percent_Identity=24.2537313432836, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI41872703, Length=348, Percent_Identity=23.8505747126437, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI14211919, Length=262, Percent_Identity=24.0458015267176, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI148727259, Length=259, Percent_Identity=24.7104247104247, Blast_Score=66, Evalue=1e-10, Organism=Escherichia coli, GI1790501, Length=555, Percent_Identity=47.7477477477478, Blast_Score=475, Evalue=1e-135, Organism=Caenorhabditis elegans, GI71980847, Length=392, Percent_Identity=26.0204081632653, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71999817, Length=457, Percent_Identity=24.2888402625821, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71999819, Length=457, Percent_Identity=24.2888402625821, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71999821, Length=423, Percent_Identity=24.3498817966903, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71990932, Length=392, Percent_Identity=25.2551020408163, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71987537, Length=567, Percent_Identity=22.0458553791887, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71987535, Length=567, Percent_Identity=22.0458553791887, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71990924, Length=392, Percent_Identity=25.2551020408163, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25150332, Length=368, Percent_Identity=23.3695652173913, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320663, Length=257, Percent_Identity=24.9027237354086, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI221473215, Length=266, Percent_Identity=25.5639097744361, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI281364513, Length=266, Percent_Identity=25.5639097744361, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI221473222, Length=266, Percent_Identity=25.5639097744361, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI221473212, Length=266, Percent_Identity=25.5639097744361, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI281360447, Length=312, Percent_Identity=23.3974358974359, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR004705 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 67953; Mature: 67953
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPRFIRPAPDGEQASSKLRASVDHARAARCTRCCTSTAQRSCTVCVHPHRRTGAQRSRE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCHHHHHH HATLRTVVSFPAFAVSMEIVFTVLILLLTVALSGALTRVLPLRLPLPLMQIAFGAALAWP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC QLNLHVTFDPEIFMLLFIPPLLFADGWRIPKRELYLQRRAILMLAFGLVFMTVLAVGYFA CEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWLIPELPLPIAFALAAVLSPTDAVALSGIAGKGRIPPQLMHILEGEALMNDASGLVALK HHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCHHHHCCCCCHHHHH FAIAAALTGVFSLRDASLTFVVVAAGGLATGAAVSWLFSALSTRFLNAEQEGDPAPGIVM HHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH TLLVPFAAYLFAEHFDLSGVLAAVSAGMMMNYTSFSRKSTVASRVRAESTWAMIEFVFNG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVFIMLGLQLPHIIGRALVEAHHTSDALVGRMIFNVGAMMLSLYAIRFLWVWLLRWFASR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAARQGLAGTMAGVRTIAVMTVGGVRGAVTLAGVLSIPVALSSGAPLPGRDTAIFIASAV HHHHHCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ILGSLIVAVIGLPLLLRGVRTTRNPLAGEERAARAAAAQAAIRAIDASHDAISAELDESG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC AARCADISARVMDQYRRRLAALAEDGPTPRAEAKQAETMELQMRIAAVRAERSMLYRLRT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESKISDETLTKLIREIDLSETALSTRKKGIV CCCCCHHHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MNPRFIRPAPDGEQASSKLRASVDHARAARCTRCCTSTAQRSCTVCVHPHRRTGAQRSRE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCHHHHHH HATLRTVVSFPAFAVSMEIVFTVLILLLTVALSGALTRVLPLRLPLPLMQIAFGAALAWP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC QLNLHVTFDPEIFMLLFIPPLLFADGWRIPKRELYLQRRAILMLAFGLVFMTVLAVGYFA CEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWLIPELPLPIAFALAAVLSPTDAVALSGIAGKGRIPPQLMHILEGEALMNDASGLVALK HHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHCCHHHHCCCCCHHHHH FAIAAALTGVFSLRDASLTFVVVAAGGLATGAAVSWLFSALSTRFLNAEQEGDPAPGIVM HHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH TLLVPFAAYLFAEHFDLSGVLAAVSAGMMMNYTSFSRKSTVASRVRAESTWAMIEFVFNG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVFIMLGLQLPHIIGRALVEAHHTSDALVGRMIFNVGAMMLSLYAIRFLWVWLLRWFASR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAARQGLAGTMAGVRTIAVMTVGGVRGAVTLAGVLSIPVALSSGAPLPGRDTAIFIASAV HHHHHCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ILGSLIVAVIGLPLLLRGVRTTRNPLAGEERAARAAAAQAAIRAIDASHDAISAELDESG HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC AARCADISARVMDQYRRRLAALAEDGPTPRAEAKQAETMELQMRIAAVRAERSMLYRLRT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESKISDETLTKLIREIDLSETALSTRKKGIV CCCCCHHHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]