Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010084 |
Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is fliY [H]
Identifier: 161523531
GI number: 161523531
Start: 377829
End: 378629
Strand: Reverse
Name: fliY [H]
Synonym: Bmul_0351
Alternate gene names: 161523531
Gene position: 378629-377829 (Counterclockwise)
Preceding gene: 161523536
Following gene: 161523529
Centisome position: 10.98
GC content: 63.8
Gene sequence:
>801_bases ATGAAACGTACGAAGTTCCTGCTGTCGGGCCTGCTGCTCGCGTCGGCCCTCGGCTTTACGGCTGTCGCCGCCCACGCGGA AGACCTGCTCGACTCTGTGAAGAAGGCCGGCGTGCTGCGCGTCGGCCTCGAAGGTACGTATCCGCCGTTCAACTCGCGCG GCACGTCGGGGCAGCTCGAGGGCTTCGACGTCGACGTCGCCAATGCCGTGGCCGGCAAGCTCGGCGTGAAGACGCAGTTC ATCCCGACCGAATGGAGCGGCATCATCGCGGGCCTGCAGGCCGGCAAGTTCGACGTGATCGTGAACCAGGTGACGATCAC GCCGCAGCGCAAGGAAGCACTCGACTTCAGCGAGCCGTACACGTATTCGGCGGCGCAGCTGATCCAGCGCAAGGACGACA AGCGCGACTTCAAGTCGCTCGAAGATTTCAAGGGCAAGAAGCTCGGCGTGACGCTCGGCACGAACTACGATCAAATGGCG CGCAGCGTGCCGGGCATCGAGGTGCAGACGTATCCGGGCGCGCCGGAGAAGCTGCGCGATCTGGCCGCGGGCCGGATCGA GGCGACGCTCGACGATCGGCTGATGCTGCCCTACATGATCAAGACGTCGAATCTGCCGTTGCGTGCCGGTGCGGTGCTGA ACGGCGGCAAGCAGGAAATGGCGATCCCGTTCCGCAAGGGCAATCCGAAGTTCGAGAAGGCGATCAACGATGCGCTGGAG TCGCTGCGCAAGGATGGCACGCTGAAGAAGATCTCGATGCACTGGTTCGGCAGCGATGTGACGGTGCCGGTTGCGCAGTA A
Upstream 100 bases:
>100_bases CCAGTTGCGAGTAGTGTCGACGTGCCGTATTCCGGCCGCGGCCAGCCGCGATCGCTGCCCGGGCTCGCCCAACCACACAC TGAACCACTGGAGATCCGCG
Downstream 100 bases:
>100_bases GCGGTTCGCCGCGGTTTCGTTGCGTCACGCCGTTCGCTGGTGGCGTGACGCGTTTCTGCAGTTCTGTACCGGGCTGTTCT GTTCCGGTCTCCTCCGTTTC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKRTKFLLSGLLLASALGFTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKTQF IPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSEPYTYSAAQLIQRKDDKRDFKSLEDFKGKKLGVTLGTNYDQMA RSVPGIEVQTYPGAPEKLRDLAAGRIEATLDDRLMLPYMIKTSNLPLRAGAVLNGGKQEMAIPFRKGNPKFEKAINDALE SLRKDGTLKKISMHWFGSDVTVPVAQ
Sequences:
>Translated_266_residues MKRTKFLLSGLLLASALGFTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKTQF IPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSEPYTYSAAQLIQRKDDKRDFKSLEDFKGKKLGVTLGTNYDQMA RSVPGIEVQTYPGAPEKLRDLAAGRIEATLDDRLMLPYMIKTSNLPLRAGAVLNGGKQEMAIPFRKGNPKFEKAINDALE SLRKDGTLKKISMHWFGSDVTVPVAQ >Mature_266_residues MKRTKFLLSGLLLASALGFTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLEGFDVDVANAVAGKLGVKTQF IPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSEPYTYSAAQLIQRKDDKRDFKSLEDFKGKKLGVTLGTNYDQMA RSVPGIEVQTYPGAPEKLRDLAAGRIEATLDDRLMLPYMIKTSNLPLRAGAVLNGGKQEMAIPFRKGNPKFEKAINDALE SLRKDGTLKKISMHWFGSDVTVPVAQ
Specific function: Part of a binding-protein-dependent transport system for cystine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=257, Percent_Identity=43.9688715953307, Blast_Score=214, Evalue=4e-57, Organism=Escherichia coli, GI1787031, Length=258, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1787085, Length=254, Percent_Identity=28.740157480315, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788649, Length=232, Percent_Identity=28.448275862069, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=27.1551724137931, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=27.2, Blast_Score=99, Evalue=3e-22,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28931; Mature: 28931
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTKFLLSGLLLASALGFTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCC GFDVDVANAVAGKLGVKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSEPY CCCEEHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCEEEEEEEEEECCCHHHHCCCCCCC TYSAAQLIQRKDDKRDFKSLEDFKGKKLGVTLGTNYDQMARSVPGIEVQTYPGAPEKLRD CHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEECCCCHHHHHH LAAGRIEATLDDRLMLPYMIKTSNLPLRAGAVLNGGKQEMAIPFRKGNPKFEKAINDALE HHCCCEEECCCCCEECCEEEECCCCCEECCCEECCCCCCEEEEECCCCCHHHHHHHHHHH SLRKDGTLKKISMHWFGSDVTVPVAQ HHHCCCCEEEEEEEEECCCEEEECCC >Mature Secondary Structure MKRTKFLLSGLLLASALGFTAVAAHAEDLLDSVKKAGVLRVGLEGTYPPFNSRGTSGQLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCC GFDVDVANAVAGKLGVKTQFIPTEWSGIIAGLQAGKFDVIVNQVTITPQRKEALDFSEPY CCCEEHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCEEEEEEEEEECCCHHHHCCCCCCC TYSAAQLIQRKDDKRDFKSLEDFKGKKLGVTLGTNYDQMARSVPGIEVQTYPGAPEKLRD CHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEECCCCHHHHHH LAAGRIEATLDDRLMLPYMIKTSNLPLRAGAVLNGGKQEMAIPFRKGNPKFEKAINDALE HHCCCEEECCCCCEECCEEEECCCCCEECCCEECCCCCCEEEEECCCCCHHHHHHHHHHH SLRKDGTLKKISMHWFGSDVTVPVAQ HHHCCCCEEEEEEEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]