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The map label for this gene is ypiA [H]

Identifier: 161509631

GI number: 161509631

Start: 1534086

End: 1535330

Strand: Reverse

Name: ypiA [H]

Synonym: USA300HOU_1401

Alternate gene names: 161509631

Gene position: 1535330-1534086 (Counterclockwise)

Preceding gene: 161509632

Following gene: 161509630

Centisome position: 53.44

GC content: 30.84

Gene sequence:

>1245_bases
ATGGAAGATATCTATAAATTAATAGACGATATCAATCTACAAAAACTAGAAAATTTAGACTCTCGTGTTAATGAAGCAAT
AACTACTGACAACGATGACGCATTATTTATTCTAGGAGAGACACTTTACAATTTTGGATTAATGCCACAAGGTTTGGAAG
TATTCCGCGTGTTATATCACAAATATCCAGACGAAAGTGAATTGCTGATTTATTTTATTGAAGGTTTAATGTCTGAAAAT
CAAACTGACGAAGCGTTAGAATATTTAAGTTATGTTGAACCATCACCTGAAAAGTTGATGTTAGAAGCAGATTTATATCA
ACAAATTAATATGATGGAAGTTGCTATTGATAAATTACAAGAAGCACTTGAACTAGAGCCAAATGATCCAATAATCCATT
TTGCATTGGCTGAAATGTTATATTATGATGGTCAATATTTACGTGCTACCTCTGAATACGAAACCGTTTTAGAAACTGGT
GAATATCAAGTTAATGGTGTAAACTTATTCTCTCGTATGGCAGATTGTAGTTTACAAAGTGGTAACTATAGTGATGCGAT
TCGCTTATACGATGAAATTAATGAAGATGAAATGACTTCAGAAGATTATCTCAAAAAAGCCATTTCTTACGATAAAAATG
ACATCACTCAAGAAGCAATTAAAATAATGACTACATTACTTTCTAAAGATCCTGATTATATTCAAGGCTACTTGTATTTA
CAATCATTATATGAAAATGAAAAAAATTATCCAGATGCCATTGAAACGGGTAAAGAAGGATTACGACTAAGTCAATTTTA
TAAAGAGTTAATGTATACAACTGGATGTTTGGAAATAGAACACGGCGATGCTAATGAAGGTGTATTATTGTTAAAACAAG
CATTAGAGGTTGATAATGCTTACCAAGAACCTTTATTGATTTTAAGCGATTTATATCGTAATGAAGAAGATTATGAAGCA
ATCATTGAATTATTAACATATGTAGATGAAGAAGATTTGGATCCTACATTCATGTGGCATTTAGCGTTCGCCTATGGTCA
AGAAGAGCGAGATAAAGAAGCTCAACATTTCTTTGAATTAGCATATCCAACGATGAAAACAAATATTGATTTTATGAGTG
ATTATTATTTCTATTTAATTGAAATTGGTCAAAAGGAACAAGCAATTACTATTTTAAATCAATTGTTGGAACTAGAGCCA
AGTAACGAAAATTGGCATGACGAATTATCAAGATTGCAATCTTAA

Upstream 100 bases:

>100_bases
AAGCGAGCCTGTCAAAATCAAACAATTTGATGCTGTAAATGTATCATTTCCAGGATTTTTACCAAAACTAAAGCTTTTAG
AAAATGAGGGATAATATAAA

Downstream 100 bases:

>100_bases
AATGGGGTATTTGATGTCAGAGACATTCAATCAAATTAAAGAAAGTTTTATTGAATATTTACTTTTTCAATATCGATTTA
AGTCGCGTATTGCAGTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYHKYPDESELLIYFIEGLMSEN
QTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQEALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETG
EYQVNGVNLFSRMADCSLQSGNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNAYQEPLLILSDLYRNEEDYEA
IIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFELAYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEP
SNENWHDELSRLQS

Sequences:

>Translated_414_residues
MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYHKYPDESELLIYFIEGLMSEN
QTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQEALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETG
EYQVNGVNLFSRMADCSLQSGNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNAYQEPLLILSDLYRNEEDYEA
IIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFELAYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEP
SNENWHDELSRLQS
>Mature_414_residues
MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYHKYPDESELLIYFIEGLMSEN
QTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQEALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETG
EYQVNGVNLFSRMADCSLQSGNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNAYQEPLLILSDLYRNEEDYEA
IIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFELAYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEP
SNENWHDELSRLQS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48424; Mature: 48424

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYH
CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHH
KYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQ
HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHH
EALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETGEYQVNGVNLFSRMADCSLQS
HHHCCCCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHCCCEEECHHHHHHHHHHCCCCC
GNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNA
HHHHHCCCCCCCHHHCCHHCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
YQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFEL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
AYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEPSNENWHDELSRLQS
HCCHHHCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MEDIYKLIDDINLQKLENLDSRVNEAITTDNDDALFILGETLYNFGLMPQGLEVFRVLYH
CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHH
KYPDESELLIYFIEGLMSENQTDEALEYLSYVEPSPEKLMLEADLYQQINMMEVAIDKLQ
HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHH
EALELEPNDPIIHFALAEMLYYDGQYLRATSEYETVLETGEYQVNGVNLFSRMADCSLQS
HHHCCCCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHCCCEEECHHHHHHHHHHCCCCC
GNYSDAIRLYDEINEDEMTSEDYLKKAISYDKNDITQEAIKIMTTLLSKDPDYIQGYLYL
CCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QSLYENEKNYPDAIETGKEGLRLSQFYKELMYTTGCLEIEHGDANEGVLLLKQALEVDNA
HHHHHCCCCCCCHHHCCHHCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
YQEPLLILSDLYRNEEDYEAIIELLTYVDEEDLDPTFMWHLAFAYGQEERDKEAQHFFEL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
AYPTMKTNIDFMSDYYFYLIEIGQKEQAITILNQLLELEPSNENWHDELSRLQS
HCCHHHCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]