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The map label for this gene is oppC2

Identifier: 161509547

GI number: 161509547

Start: 1417088

End: 1417918

Strand: Reverse

Name: oppC2

Synonym: USA300HOU_1315

Alternate gene names: 161509547

Gene position: 1417918-1417088 (Counterclockwise)

Preceding gene: 161509548

Following gene: 161509546

Centisome position: 49.35

GC content: 32.25

Gene sequence:

>831_bases
ATGCATAAAATATTTTCAAAGAATAACCTGATATTTTTTGTATTCGTTGCATTTATTTTTGTGGTAATTGTACTGCAATT
CTTTGTCAGTAGTGAAAATGCAACCAAAGTCAATTTATCACAAACTTTTGAACCTATTAGTTGGTTGCATTTATTAGGAA
CTGATGATTATGGGAGAGATTTATTTACCCGAATTATTATCGGTGCACGTTCAACATTGTTTGTTACTGTTTTAACATTA
ATAGCTATCGTTGTCATAGGTGTTACACTAGGTCTATTTGCCGGATACAAAAAAGGGTGGATTGAACGATTAGTGTTAAG
GTTTATTGATGTTGGTCTAAGTATTCCAGAATTTATCATCATGATTGCTTTAGCAAGTTTTTTTCAACCATCTTTATGGA
ATTTAGTTATCTCAATTACATTAATAAAATGGATGAATTACACAAGGTTGACTAGAAGTATAGTTAATAGCGAAATGAAT
AAGCCTTATATAAAAATGGCACAATTATTTCATGTACCAACAAGAACAATATTAATACGTCATTTAACACCTAAAATTAT
ACCGGCTATTATCGTTTTGATGGTCGTTGATTTCGGTAAAATCATTCTATATATAAGTTCACTATCATTTATTGGGTTAG
GTGCACAACCGCCAACACCAGAGTGGGGCGCTATGTTGCAACAAGGTCGTGATTTTATTTCGTCTCATCCAATTATGTTG
ATTGCACCTGCTTCAGTCATTGCTATAACTATTTTAATTTTTAATTTAACCGGTGATGCACTAAGAGATAGATTGCTGAA
ACAACGGGGTGAATATGATGAGTCTCATTGA

Upstream 100 bases:

>100_bases
GATTTATTAACGTTATTACTTGATCCGAAGCAGCGTTTACAATTAGGAAATCCAAAAATCAAAACCAATACACCATTGAT
ATCAGAAAGTAGTGACCGTC

Downstream 100 bases:

>100_bases
TATACAAAATTTAACAATAAAGAATACTAGTGAGAAATCTCTTATTAAAGGGATTGATTTGAAAATTTTTAGTCAACAGA
TTAATGCCTTGATTGGAGAG

Product: oligopeptide ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTL
IAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVISITLIKWMNYTRLTRSIVNSEMN
KPYIKMAQLFHVPTRTILIRHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH

Sequences:

>Translated_276_residues
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTL
IAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVISITLIKWMNYTRLTRSIVNSEMN
KPYIKMAQLFHVPTRTILIRHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH
>Mature_276_residues
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRDLFTRIIIGARSTLFVTVLTL
IAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFIIMIALASFFQPSLWNLVISITLIKWMNYTRLTRSIVNSEMN
KPYIKMAQLFHVPTRTILIRHLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH

Specific function: Part of a transport system that may be involved in oligopeptide uptake. Probably responsible for the translocation of the substrate across the membrane. Important for S.aureus growth and survival during the infection process

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1787054, Length=216, Percent_Identity=37.5, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1787760, Length=257, Percent_Identity=30.3501945525292, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1789964, Length=228, Percent_Identity=37.719298245614, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI1789889, Length=216, Percent_Identity=32.4074074074074, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787498, Length=265, Percent_Identity=31.6981132075472, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787549, Length=211, Percent_Identity=33.6492890995261, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788505, Length=236, Percent_Identity=33.0508474576271, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OPPC2_STAA3 (Q2FH56)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493972.1
- ProteinModelPortal:   Q2FH56
- STRING:   Q2FH56
- EnsemblBacteria:   EBSTAT00000037012
- GeneID:   3914237
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_1275
- eggNOG:   COG1173
- GeneTree:   EBGT00050000023946
- HOGENOM:   HBG729429
- OMA:   ITIIKWM
- ProtClustDB:   CLSK885310
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 31256; Mature: 31256

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15f7e368)-; HASH(0x1653f984)-; HASH(0x14276a28)-; HASH(0x15d04f6c)-; HASH(0x164d3680)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHH
LFTRIIIGARSTLFVTVLTLIAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFII
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MIALASFFQPSLWNLVISITLIKWMNYTRLTRSIVNSEMNKPYIKMAQLFHVPTRTILIR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
HLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCEEE
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH
EECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MHKIFSKNNLIFFVFVAFIFVVIVLQFFVSSENATKVNLSQTFEPISWLHLLGTDDYGRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHH
LFTRIIIGARSTLFVTVLTLIAIVVIGVTLGLFAGYKKGWIERLVLRFIDVGLSIPEFII
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MIALASFFQPSLWNLVISITLIKWMNYTRLTRSIVNSEMNKPYIKMAQLFHVPTRTILIR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
HLTPKIIPAIIVLMVVDFGKIILYISSLSFIGLGAQPPTPEWGAMLQQGRDFISSHPIML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCEEE
IAPASVIAITILIFNLTGDALRDRLLKQRGEYDESH
EECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA