Click here to switch to the map view.

The map label for this gene is ctaA [H]

Identifier: 161509293

GI number: 161509293

Start: 1126474

End: 1127544

Strand: Reverse

Name: ctaA [H]

Synonym: USA300HOU_1053

Alternate gene names: 161509293

Gene position: 1127544-1126474 (Counterclockwise)

Preceding gene: 161509299

Following gene: 161509289

Centisome position: 39.25

GC content: 33.52

Gene sequence:

>1071_bases
ATGTCGTCCACATACAATACTTGTAAAATTAAATCATATTTCCTGCGTTGGATCCCATCTTTTCATATCCTACAATCAGG
TCTATTTATAGTATCATCTCAAATCCGGCTATTAATTCTAATTCTCAGTGATGCGTTTTTTTATGATGGGGTGTATAAAT
TGTTTGGCAAAAAGAATTTAAAATGGTTAGGTGTCGTAGCAACGTTAATGATGACATTTGTACAACTTGGTGGAGCCTTA
GTTACCAAAACCGGATCAGCTGATGGTTGTGGTTCTTCTTGGCCACTATGTCATGGTGCGTTGATTCCAGAATTCTTTCC
TATTGATACGATTATTGAGTTAAGTCATAGAGCCGTTTCAGCTTTGTCTTTATTAATGGTCTTATGGTTAGTTATCACTG
CATGGAAACATATAGGCTATATTAAAGAAATTAAACCTTTATCAATCATTAGTGTTGGATTCTTATTATTGCAAGCATTA
ATCGGAGCTGCTGCTGTTATTTGGCAACAAAACGATTACGTTTTAGCATTGCACTTTGGTATATCATTAATCAGTTTCTC
ATCTGTATTTTTAATAACATTGATTATTTTCTCTATAGATCAAAAATATGAAGCTGACGAATTATATATCAAAAAGCCAT
TAAGACGTTTAACATGGTTAATGGCAATCATCATTTATTGTGGTGTTTATACTGGTGCACTAGTGAGACATGCGGATGCA
AGTTTAGCATATGGTGGTTGGCCATTGCCATTCCACGATCTTGTACCACATTCAGAACAAGATTGGGTTCAACTCACGCA
TCGTATCATGGCTTTTATAGTGTTTACGATTATTATGATTACTTATATTCACGCTGTTAAAAATTATCCAAATAACCGTA
CTGTTCATTATGGTTATACAGCTGCATTTATACTTGTTATATTACAAGTTATCACAGGTGCATTATCTATTATGACAAAT
GTTAACCTGATAATCGCACTTTTCCATGCATTATTTATCACTTATTTATTTGGTATGACAACATACTTTATCATGCTAAT
GTTACGATCAGTAAGAAGTGACAAGCAATAA

Upstream 100 bases:

>100_bases
TCATGCATCTAAAAGAGATTAATATTTAAGCTTCAAATTTGAGTAAACGTGGATTACATAATTATCCCAATAAAAAAATC
ATTACGATTAAGTTCTTTTT

Downstream 100 bases:

>100_bases
CAAAAAAGCAAACCGTAATTTTAATGGCACGCCCATTAAAATTACGGTTTTTTATATCAATATTTAAAATTAAACCTAAG
CCATGTAAAAACGAGATTAC

Product: cytochrome oxidase assembly protein

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSSTYNTCKIKSYFLRWIPSFHILQSGLFIVSSQIRLLILILSDAFFYDGVYKLFGKKNLKWLGVVATLMMTFVQLGGAL
VTKTGSADGCGSSWPLCHGALIPEFFPIDTIIELSHRAVSALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFLLLQAL
IGAAAVIWQQNDYVLALHFGISLISFSSVFLITLIIFSIDQKYEADELYIKKPLRRLTWLMAIIIYCGVYTGALVRHADA
SLAYGGWPLPFHDLVPHSEQDWVQLTHRIMAFIVFTIIMITYIHAVKNYPNNRTVHYGYTAAFILVILQVITGALSIMTN
VNLIIALFHALFITYLFGMTTYFIMLMLRSVRSDKQ

Sequences:

>Translated_356_residues
MSSTYNTCKIKSYFLRWIPSFHILQSGLFIVSSQIRLLILILSDAFFYDGVYKLFGKKNLKWLGVVATLMMTFVQLGGAL
VTKTGSADGCGSSWPLCHGALIPEFFPIDTIIELSHRAVSALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFLLLQAL
IGAAAVIWQQNDYVLALHFGISLISFSSVFLITLIIFSIDQKYEADELYIKKPLRRLTWLMAIIIYCGVYTGALVRHADA
SLAYGGWPLPFHDLVPHSEQDWVQLTHRIMAFIVFTIIMITYIHAVKNYPNNRTVHYGYTAAFILVILQVITGALSIMTN
VNLIIALFHALFITYLFGMTTYFIMLMLRSVRSDKQ
>Mature_355_residues
SSTYNTCKIKSYFLRWIPSFHILQSGLFIVSSQIRLLILILSDAFFYDGVYKLFGKKNLKWLGVVATLMMTFVQLGGALV
TKTGSADGCGSSWPLCHGALIPEFFPIDTIIELSHRAVSALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFLLLQALI
GAAAVIWQQNDYVLALHFGISLISFSSVFLITLIIFSIDQKYEADELYIKKPLRRLTWLMAIIIYCGVYTGALVRHADAS
LAYGGWPLPFHDLVPHSEQDWVQLTHRIMAFIVFTIIMITYIHAVKNYPNNRTVHYGYTAAFILVILQVITGALSIMTNV
NLIIALFHALFITYLFGMTTYFIMLMLRSVRSDKQ

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 40250; Mature: 40118

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTYNTCKIKSYFLRWIPSFHILQSGLFIVSSQIRLLILILSDAFFYDGVYKLFGKKNL
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KWLGVVATLMMTFVQLGGALVTKTGSADGCGSSWPLCHGALIPEFFPIDTIIELSHRAVS
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
ALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFLLLQALIGAAAVIWQQNDYVLALHFG
HHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHH
ISLISFSSVFLITLIIFSIDQKYEADELYIKKPLRRLTWLMAIIIYCGVYTGALVRHADA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLAYGGWPLPFHDLVPHSEQDWVQLTHRIMAFIVFTIIMITYIHAVKNYPNNRTVHYGYT
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHH
AAFILVILQVITGALSIMTNVNLIIALFHALFITYLFGMTTYFIMLMLRSVRSDKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSTYNTCKIKSYFLRWIPSFHILQSGLFIVSSQIRLLILILSDAFFYDGVYKLFGKKNL
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KWLGVVATLMMTFVQLGGALVTKTGSADGCGSSWPLCHGALIPEFFPIDTIIELSHRAVS
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHH
ALSLLMVLWLVITAWKHIGYIKEIKPLSIISVGFLLLQALIGAAAVIWQQNDYVLALHFG
HHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHH
ISLISFSSVFLITLIIFSIDQKYEADELYIKKPLRRLTWLMAIIIYCGVYTGALVRHADA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLAYGGWPLPFHDLVPHSEQDWVQLTHRIMAFIVFTIIMITYIHAVKNYPNNRTVHYGYT
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHH
AAFILVILQVITGALSIMTNVNLIIALFHALFITYLFGMTTYFIMLMLRSVRSDKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA