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The map label for this gene is qoxD

Identifier: 161509242

GI number: 161509242

Start: 1066669

End: 1066959

Strand: Reverse

Name: qoxD

Synonym: USA300HOU_1002

Alternate gene names: 161509242

Gene position: 1066959-1066669 (Counterclockwise)

Preceding gene: 161509243

Following gene: 161509240

Centisome position: 37.14

GC content: 35.4

Gene sequence:

>291_bases
ATGAGTACAATAATGAAACATACTGTAGGATTTATCGCATCTATCGTATTAACGCTTTTAGCAGTTTACGTAACACTATA
CACGTCATTAACATTCCACGCGAAGTTGACAATTATCTTTGGCTTTGCATTCGTCCAAGCAGGACTTCAATTATTAATGT
TCATGCATTTAACTGAAGGTAAAGATGGACGTTTACAAACATTCAAAGTTATCTTTGCTCTTGTAATTACACTTTGTTTC
GTTGTCGGAACATATTGGGTTATGCAAGGCGGTCACTCTTCACACTTATAA

Upstream 100 bases:

>100_bases
CGCCAAAATTATTTATAGTAAGTTTATACTGGCACTTCTTAGATGTTGTTTGGGTTTTCATCTTTACTGCCGTATATATG
ATAGGGATGGTGTATAGCGG

Downstream 100 bases:

>100_bases
ACAACATTTTAATAATGTAAAGTTTAACCAGCTAACACTTTTGTTAGCTGGTTTTTATTTTCCTTCAATTTTTAAATGGT
TAAGTCCCCTTCTATATCTT

Product: cytochrome c oxidase subunit IV

Products: NA

Alternate protein names: Quinol oxidase polypeptide IV

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSTIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFVQAGLQLLMFMHLTEGKDGRLQTFKVIFALVITLCF
VVGTYWVMQGGHSSHL

Sequences:

>Translated_96_residues
MSTIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFVQAGLQLLMFMHLTEGKDGRLQTFKVIFALVITLCF
VVGTYWVMQGGHSSHL
>Mature_95_residues
STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFVQAGLQLLMFMHLTEGKDGRLQTFKVIFALVITLCFV
VGTYWVMQGGHSSHL

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QOX4_STAA3 (Q2FI20)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493658.1
- STRING:   Q2FI20
- EnsemblBacteria:   EBSTAT00000037137
- GeneID:   3914704
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_0960
- eggNOG:   COG3125
- GeneTree:   EBGT00050000024480
- HOGENOM:   HBG534482
- ProtClustDB:   CLSK885107
- InterPro:   IPR014250
- InterPro:   IPR005171
- TIGRFAMs:   TIGR02901

Pfam domain/function: PF03626 COX4_pro

EC number: 1.9.3.-

Molecular weight: Translated: 10687; Mature: 10556

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1507d83c)-; HASH(0x152bc718)-; HASH(0x13c32cb8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFVQAGLQLLMFMHLTEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KDGRLQTFKVIFALVITLCFVVGTYWVMQGGHSSHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure 
STIMKHTVGFIASIVLTLLAVYVTLYTSLTFHAKLTIIFGFAFVQAGLQLLMFMHLTEG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KDGRLQTFKVIFALVITLCFVVGTYWVMQGGHSSHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA