| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
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The map label for this gene is 161509199
Identifier: 161509199
GI number: 161509199
Start: 1005824
End: 1006630
Strand: Reverse
Name: 161509199
Synonym: USA300HOU_0959
Alternate gene names: NA
Gene position: 1006630-1005824 (Counterclockwise)
Preceding gene: 161509200
Following gene: 161509195
Centisome position: 35.04
GC content: 30.48
Gene sequence:
>807_bases ATGGCTGGAGAATTACGAATAATGGAAAATAAGAGTCGTGAAGATATCAATCTATCACCTGTAAGTAAAATCGAAATTTA TTCATTTTTCGATCCATTTAGCTCCGATTGCTTCAAATTATCAGCAATCTTATCCAAATTAAGAATTGAATATAATCAAT ATATACGTATCAGACATATATTAAATCCTTCGTTAAAAGTATTAACGAAATGCCAAGCTCAAAGTACATCCAACTTTGAT AACATCGCCCTAGCTTATAAAGCAGCTGAGTTACAAGGTCGTGTACGTGCCGAACGATTTATACATTTAATGCAAAATGA AATCATACCTAAAAGAGATATTATTACAGAATCAATGATTTGTGACTGTATTCAAAATGCAGGTATTGATTTAGAAGTAT TTAAAGACGACTTACAAAAAAGTAAACTAACCGAAAGCTTGAAAATTGATTTGCATATTGCAAGAGAAATGGAAATCGAA CAAGCCCCTTCTCTCGTTTTCTTTAGTGAAGATGTTCATGAAGAAGGTTTAAAAGTCGAAGGATTATACCCATATCACAT CTATACTTATATAATTAATGAATTGATGGGTAAACCTATCGAAAAGAATCTTCCTCCTAAATTAGAAACTTATATACAGC AACAACAACTTGTAACGATGGAAGAATTACTTACTATTTATGAATGGCCAGAAAAACTTTTAAACAAAGAGTTAAAGAAG TTAGCCATTCAACAAAAAATTGAAAAACTTAAATATCCAGATGGCGATTTCTGGAAATCTAAAATGCCTAAAATCAAATC AAAATAA
Upstream 100 bases:
>100_bases GCTGCGTTTCCACAAGGTGTTGGAGATTATTTATTTGAGCGCTTAAGATTAACTGCTAATCATATGGTGAATTCCTAAAA TTAATTGTAGGTGAATAAAC
Downstream 100 bases:
>100_bases ATAAATTAAAGACCTCGTACACCATAAATGTAACGAGGTCTTTTTACTGACTCTTAATTTTGCAACATTAAATTATTAGA ACGTAATGTTACACATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAILSKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSNFD NIALAYKAAELQGRVRAERFIHLMQNEIIPKRDIITESMICDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIE QAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLVTMEELLTIYEWPEKLLNKELKK LAIQQKIEKLKYPDGDFWKSKMPKIKSK
Sequences:
>Translated_268_residues MAGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAILSKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSNFD NIALAYKAAELQGRVRAERFIHLMQNEIIPKRDIITESMICDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIE QAPSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLVTMEELLTIYEWPEKLLNKELKK LAIQQKIEKLKYPDGDFWKSKMPKIKSK >Mature_267_residues AGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAILSKLRIEYNQYIRIRHILNPSLKVLTKCQAQSTSNFDN IALAYKAAELQGRVRAERFIHLMQNEIIPKRDIITESMICDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIEQ APSLVFFSEDVHEEGLKVEGLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLVTMEELLTIYEWPEKLLNKELKKL AIQQKIEKLKYPDGDFWKSKMPKIKSK
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0413 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1001_STAAM (Q931V3)
Other databases:
- EMBL: BA000017 - EMBL: AJ564070 - RefSeq: NP_371526.2 - ProteinModelPortal: Q931V3 - STRING: Q931V3 - EnsemblBacteria: EBSTAT00000006499 - GeneID: 1120976 - GenomeReviews: BA000017_GR - KEGG: sav:SAV1001 - eggNOG: COG2761 - GeneTree: EBGT00050000024214 - HOGENOM: HBG535581 - OMA: VDLHIAR - ProtClustDB: CLSK886176 - BioCyc: SAUR158878:SAV1001-MONOMER - InterPro: IPR023169 - InterPro: IPR012336 - InterPro: IPR012335 - Gene3D: G3DSA:3.40.30.10
Pfam domain/function: SSF52833 Thiordxn-like_fd
EC number: NA
Molecular weight: Translated: 31364; Mature: 31233
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAILSKLRIEYNQYIRIRHI CCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LNPSLKVLTKCQAQSTSNFDNIALAYKAAELQGRVRAERFIHLMQNEIIPKRDIITESMI HCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH CDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIEQAPSLVFFSEDVHEEGLKVE HHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCEEEEECHHHHCCCEEC GLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLVTMEELLTIYEWPEKLLNKELKK CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIQQKIEKLKYPDGDFWKSKMPKIKSK HHHHHHHHHHCCCCCCHHHHCCCCCCCC >Mature Secondary Structure AGELRIMENKSREDINLSPVSKIEIYSFFDPFSSDCFKLSAILSKLRIEYNQYIRIRHI CCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LNPSLKVLTKCQAQSTSNFDNIALAYKAAELQGRVRAERFIHLMQNEIIPKRDIITESMI HCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH CDCIQNAGIDLEVFKDDLQKSKLTESLKIDLHIAREMEIEQAPSLVFFSEDVHEEGLKVE HHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHCCCEEEEECHHHHCCCEEC GLYPYHIYTYIINELMGKPIEKNLPPKLETYIQQQQLVTMEELLTIYEWPEKLLNKELKK CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIQQKIEKLKYPDGDFWKSKMPKIKSK HHHHHHHHHHCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11418146