| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
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The map label for this gene is 161509094
Identifier: 161509094
GI number: 161509094
Start: 898749
End: 899207
Strand: Reverse
Name: 161509094
Synonym: USA300HOU_0853
Alternate gene names: NA
Gene position: 899207-898749 (Counterclockwise)
Preceding gene: 161509095
Following gene: 161509093
Centisome position: 31.3
GC content: 32.68
Gene sequence:
>459_bases ATGTATTTATACGAAAAGATGGTTATTGAAAACAAAGAGATACCAATTGATGATGGGAAATCTTTAGGTAATTTTGAGGG TCTCTATGACAATGGGGTTATTTTAATTAATAAAAATTTGTCAGAAACACGTAAAGCAGAAGTGTTATATGAGGAACTTG CCCACCACAAGTTGACGTATGGCAACATTTTAGACCAATCAAAATGGATTAATAGAAAATTTGAAAATTATGCACGTAGA CACGGCTTTATCTCAGCTGTTCCATTACGTGAAATTGTAGAAGCTTATAATTATGGCGTACGTAACTTGTATGAGTTGTC CGAGTACCTACAACTGAGTGAAAAATACATATTAGAAGCGATAGAACAATATAAAAAGATATACGGTATTGGTACCCACT ACGGCGAGTATTCAATTACATTTGAGCCGTTGAGAGTTTTTAAATATAAAGAAATATAA
Upstream 100 bases:
>100_bases CGCACTTAGATGGAGATTTTACAGAGGAAGAATTAATTGAAATTAGAAAGTATGCGGAGTTAGTTAGAAAAGCACATCGA AATCAGTAAGGGGTTATTGC
Downstream 100 bases:
>100_bases CAAAGGAGAAATGAAAATGAATAAAATATTTAGAGTACTCACTGTTAGCTTGTTTTTCTTCACATTTTTAATAAAAAACA ATCTAGCATATGCTGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Phage Protein; Pathogenicity Island Protein; Gp23-Like Protein
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MYLYEKMVIENKEIPIDDGKSLGNFEGLYDNGVILINKNLSETRKAEVLYEELAHHKLTYGNILDQSKWINRKFENYARR HGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEKYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
Sequences:
>Translated_152_residues MYLYEKMVIENKEIPIDDGKSLGNFEGLYDNGVILINKNLSETRKAEVLYEELAHHKLTYGNILDQSKWINRKFENYARR HGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEKYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI >Mature_152_residues MYLYEKMVIENKEIPIDDGKSLGNFEGLYDNGVILINKNLSETRKAEVLYEELAHHKLTYGNILDQSKWINRKFENYARR HGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEKYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18065; Mature: 18065
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLYEKMVIENKEIPIDDGKSLGNFEGLYDNGVILINKNLSETRKAEVLYEELAHHKLTY CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHH GNILDQSKWINRKFENYARRHGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEKYILEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI HHHHHHHHCCCCCCCCEEEEEHHHHHHEECCC >Mature Secondary Structure MYLYEKMVIENKEIPIDDGKSLGNFEGLYDNGVILINKNLSETRKAEVLYEELAHHKLTY CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHH GNILDQSKWINRKFENYARRHGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEKYILEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI HHHHHHHHCCCCCCCCEEEEEHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA