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The map label for this gene is 160902674

Identifier: 160902674

GI number: 160902674

Start: 1300001

End: 1300837

Strand: Direct

Name: 160902674

Synonym: Pmob_1216

Alternate gene names: NA

Gene position: 1300001-1300837 (Clockwise)

Preceding gene: 160902673

Following gene: 160902676

Centisome position: 59.92

GC content: 33.09

Gene sequence:

>837_bases
GTGAAGTTTAAAATAGTAGTTGACAGTTGTTGTGATTTAACAAAAGAAATTAAAGAAAGATTTGATATATCGACAGTTCC
ATTATTTATTGATATTGATGATCAACATTTTATAGATGATGAGAATCTAGACCGTGAAAAACTACTGGAGGCAATGAGAA
ACTCTACCGAAGTTCCTAAAACCGCCAGTCCAGGGCCTAAGCCATTTCTAAATTTATACGAGAAATATGAAAATACCTTT
GTAGTTACCTTATCTAAGGAGTTAAGTTCGAGTTATCAGAATGCGGTTCTCGCTAAGAATATTTTATTGGAAGAAGCTAA
AGACAAATTCGTGAAAGTGTTCAATTCTTTTAGCGCTTCTGTCGGTGAAACAATGATTGCTTACAAAATTGGTGAATTAA
TTGAAGCAAAACTCGGTAGGGAAGAAATAATAAATAAAGCAGAAAAATATATAGAAGAGATGAAGACCTTATTTGTGCTT
GATTCGCTAGATAACCTTATCAAGGCAGGGCGTATGGGTAGATTGAAAGGTGAATTTGCATCTTTATTGAATATAAAACC
TATTCTGGCTGGTACTAGAGAAGGTACTATAACTTTATTGGATAAAGCACGAGGAAGCAAAAATGCGATTAAAAAGCTAA
TTGATAAAATAGGAGAAGTAGGGAATAATTTGAAAGATAAAGTTTTAGGAATTGCTCACTGCAATGCTCTCGAGAGAGCT
GAGTATATCAAAAAAGAAGCAGCTAAAAGATATAATTTTAGAGATATAATTATTGTGGAAACTGCAGGGATAAGTACTGT
TTATGCTAATGAAGGCGGAGTTATACTTGCTTTTTAA

Upstream 100 bases:

>100_bases
TAAAAATTTAATTAAAAAGTCTATTTTTTATTATATCTTGGTATAATATACTATGAAGCTGATTAAATATATATCTAAAT
TCAACGGAGGTAATAAAATA

Downstream 100 bases:

>100_bases
AGTGAATTAAATTTTGGAAAATCCCCGCCATTATAGGCGGGGATAATATATAAAAAGTTTTTTTGCATTTATCTTTGTAT
TATACAGCAAGAATGAATGC

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKFKIVVDSCCDLTKEIKERFDISTVPLFIDIDDQHFIDDENLDREKLLEAMRNSTEVPKTASPGPKPFLNLYEKYENTF
VVTLSKELSSSYQNAVLAKNILLEEAKDKFVKVFNSFSASVGETMIAYKIGELIEAKLGREEIINKAEKYIEEMKTLFVL
DSLDNLIKAGRMGRLKGEFASLLNIKPILAGTREGTITLLDKARGSKNAIKKLIDKIGEVGNNLKDKVLGIAHCNALERA
EYIKKEAAKRYNFRDIIIVETAGISTVYANEGGVILAF

Sequences:

>Translated_278_residues
MKFKIVVDSCCDLTKEIKERFDISTVPLFIDIDDQHFIDDENLDREKLLEAMRNSTEVPKTASPGPKPFLNLYEKYENTF
VVTLSKELSSSYQNAVLAKNILLEEAKDKFVKVFNSFSASVGETMIAYKIGELIEAKLGREEIINKAEKYIEEMKTLFVL
DSLDNLIKAGRMGRLKGEFASLLNIKPILAGTREGTITLLDKARGSKNAIKKLIDKIGEVGNNLKDKVLGIAHCNALERA
EYIKKEAAKRYNFRDIIIVETAGISTVYANEGGVILAF
>Mature_278_residues
MKFKIVVDSCCDLTKEIKERFDISTVPLFIDIDDQHFIDDENLDREKLLEAMRNSTEVPKTASPGPKPFLNLYEKYENTF
VVTLSKELSSSYQNAVLAKNILLEEAKDKFVKVFNSFSASVGETMIAYKIGELIEAKLGREEIINKAEKYIEEMKTLFVL
DSLDNLIKAGRMGRLKGEFASLLNIKPILAGTREGTITLLDKARGSKNAIKKLIDKIGEVGNNLKDKVLGIAHCNALERA
EYIKKEAAKRYNFRDIIIVETAGISTVYANEGGVILAF

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31181; Mature: 31181

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKIVVDSCCDLTKEIKERFDISTVPLFIDIDDQHFIDDENLDREKLLEAMRNSTEVPK
CEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
TASPGPKPFLNLYEKYENTFVVTLSKELSSSYQNAVLAKNILLEEAKDKFVKVFNSFSAS
CCCCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGETMIAYKIGELIEAKLGREEIINKAEKYIEEMKTLFVLDSLDNLIKAGRMGRLKGEFA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SLLNIKPILAGTREGTITLLDKARGSKNAIKKLIDKIGEVGNNLKDKVLGIAHCNALERA
HHHCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EYIKKEAAKRYNFRDIIIVETAGISTVYANEGGVILAF
HHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCEEEEC
>Mature Secondary Structure
MKFKIVVDSCCDLTKEIKERFDISTVPLFIDIDDQHFIDDENLDREKLLEAMRNSTEVPK
CEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
TASPGPKPFLNLYEKYENTFVVTLSKELSSSYQNAVLAKNILLEEAKDKFVKVFNSFSAS
CCCCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGETMIAYKIGELIEAKLGREEIINKAEKYIEEMKTLFVLDSLDNLIKAGRMGRLKGEFA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SLLNIKPILAGTREGTITLLDKARGSKNAIKKLIDKIGEVGNNLKDKVLGIAHCNALERA
HHHCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
EYIKKEAAKRYNFRDIIIVETAGISTVYANEGGVILAF
HHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]