| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902673
Identifier: 160902673
GI number: 160902673
Start: 1298550
End: 1299569
Strand: Direct
Name: 160902673
Synonym: Pmob_1215
Alternate gene names: NA
Gene position: 1298550-1299569 (Clockwise)
Preceding gene: 160902665
Following gene: 160902674
Centisome position: 59.85
GC content: 30.2
Gene sequence:
>1020_bases ATGTATGAATTGAAAAAACCAAAAGAAAGGTTGTTCTGTGAGCAATGTGGAAAATTGGTGGGATATAAAACAATAAAAAA GAAAGAGAATTATAACGTTAAGAATTACCCTATTGAAGTCGAACGTACTGTTGCTATATGTGAAGAATGTGGGGCTGAGT TACTTGAACCCTATTATGAGAATGAGAATTTAAAAGCAGCATACAGAAAATATGCTGAGTTGAATAATTTGGTGTTACCT GAAGAGATCAAGGAAATTAGAAGTAAGTATAATGTCTCTCAGACACTATTTGCCTTGATTTTAGGTTTAGGAGAAGCTAC TATACAACGTTATGAGATGGGTTCATTACCAACCAAAGTTAATAGCGATTTGATCAAGAGAGTTTCCGAACCGATTGAAT TTTATAAGATTTTAAAAAGTAACAAAGATAATATTCCTGATATCGAGTATAAGAGGATCTTAGGAAACATTCAGAGAATT CTTAAAGAGTTTGAAAATAAACTTGAAGTTCAGGAATTGGAAAAAATTTTGTATATTAAACATCCTGAAATAGACATTGA AAAAATGAAAGGCTTAATAGCTGGATTATTTTATTATTCAAATAAATATCATCACAAGGATTTTTTATACAAAACCGTCT TTTTTAAATTGCTATGGTTAGTGGAAAAGGAATCTAAAAAAAGCCTTGGCAGGCAAATTGCTAATTTGAAATTCATTCAT TATAATTATGGTCCGATTCCTAAAGGAGCAAAAAATGAAGAGGGCGTTCTTTTAGATTATTTGATAAAGACAAATTTAAT AAGAATGAATATCGATTTTTCTAAAAAGTTTTTGCAAGAGACGTATAAGATTGGTTTGGTGGATCAAACTCCTTTAAGGA ATTTAACAGATGAAGAAAGAAAGATTGTAGAAAAGATTGTTAAAAAGTATGGAGGATTGAGTGCTAGCGAATTAGTTGAA GTATCACATAATGACGTGGCTTATAAAAGTTCAAATTATGATGAAGAGATAGTGATTTAG
Upstream 100 bases:
>100_bases ATATGAGTGTAGGAGTTATAAAATGGTTGAATCTTTTCTAGAATTATTGAAACAATTTATCAATAATAATCAATTACAGC TCGTGAAAAGGGCGAAGGAA
Downstream 100 bases:
>100_bases GGTCAAACTTTTTATGGATAATTCTGATCTATAACAATATACCACCTTATCACACAAATGCTGTGCAACGAGTTTTATAG CGCCCCTTCGCCCCGCAGCC
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; XRE Family Transcriptional Regulator; Phage-Associated Protein; Prophage Ps3 ; Helix-Turn-Helix Domain Protein; Phage-Associated Protein-Like Protein; Phage-Associated Protein Family Protein
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MYELKKPKERLFCEQCGKLVGYKTIKKKENYNVKNYPIEVERTVAICEECGAELLEPYYENENLKAAYRKYAELNNLVLP EEIKEIRSKYNVSQTLFALILGLGEATIQRYEMGSLPTKVNSDLIKRVSEPIEFYKILKSNKDNIPDIEYKRILGNIQRI LKEFENKLEVQELEKILYIKHPEIDIEKMKGLIAGLFYYSNKYHHKDFLYKTVFFKLLWLVEKESKKSLGRQIANLKFIH YNYGPIPKGAKNEEGVLLDYLIKTNLIRMNIDFSKKFLQETYKIGLVDQTPLRNLTDEERKIVEKIVKKYGGLSASELVE VSHNDVAYKSSNYDEEIVI
Sequences:
>Translated_339_residues MYELKKPKERLFCEQCGKLVGYKTIKKKENYNVKNYPIEVERTVAICEECGAELLEPYYENENLKAAYRKYAELNNLVLP EEIKEIRSKYNVSQTLFALILGLGEATIQRYEMGSLPTKVNSDLIKRVSEPIEFYKILKSNKDNIPDIEYKRILGNIQRI LKEFENKLEVQELEKILYIKHPEIDIEKMKGLIAGLFYYSNKYHHKDFLYKTVFFKLLWLVEKESKKSLGRQIANLKFIH YNYGPIPKGAKNEEGVLLDYLIKTNLIRMNIDFSKKFLQETYKIGLVDQTPLRNLTDEERKIVEKIVKKYGGLSASELVE VSHNDVAYKSSNYDEEIVI >Mature_339_residues MYELKKPKERLFCEQCGKLVGYKTIKKKENYNVKNYPIEVERTVAICEECGAELLEPYYENENLKAAYRKYAELNNLVLP EEIKEIRSKYNVSQTLFALILGLGEATIQRYEMGSLPTKVNSDLIKRVSEPIEFYKILKSNKDNIPDIEYKRILGNIQRI LKEFENKLEVQELEKILYIKHPEIDIEKMKGLIAGLFYYSNKYHHKDFLYKTVFFKLLWLVEKESKKSLGRQIANLKFIH YNYGPIPKGAKNEEGVLLDYLIKTNLIRMNIDFSKKFLQETYKIGLVDQTPLRNLTDEERKIVEKIVKKYGGLSASELVE VSHNDVAYKSSNYDEEIVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39799; Mature: 39799
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYELKKPKERLFCEQCGKLVGYKTIKKKENYNVKNYPIEVERTVAICEECGAELLEPYYE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHC NENLKAAYRKYAELNNLVLPEEIKEIRSKYNVSQTLFALILGLGEATIQRYEMGSLPTKV CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHCCCCCCHH NSDLIKRVSEPIEFYKILKSNKDNIPDIEYKRILGNIQRILKEFENKLEVQELEKILYIK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC HPEIDIEKMKGLIAGLFYYSNKYHHKDFLYKTVFFKLLWLVEKESKKSLGRQIANLKFIH CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE YNYGPIPKGAKNEEGVLLDYLIKTNLIRMNIDFSKKFLQETYKIGLVDQTPLRNLTDEER ECCCCCCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHH KIVEKIVKKYGGLSASELVEVSHNDVAYKSSNYDEEIVI HHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCCCC >Mature Secondary Structure MYELKKPKERLFCEQCGKLVGYKTIKKKENYNVKNYPIEVERTVAICEECGAELLEPYYE CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHC NENLKAAYRKYAELNNLVLPEEIKEIRSKYNVSQTLFALILGLGEATIQRYEMGSLPTKV CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHCCCCCCHH NSDLIKRVSEPIEFYKILKSNKDNIPDIEYKRILGNIQRILKEFENKLEVQELEKILYIK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC HPEIDIEKMKGLIAGLFYYSNKYHHKDFLYKTVFFKLLWLVEKESKKSLGRQIANLKFIH CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE YNYGPIPKGAKNEEGVLLDYLIKTNLIRMNIDFSKKFLQETYKIGLVDQTPLRNLTDEER ECCCCCCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHH KIVEKIVKKYGGLSASELVEVSHNDVAYKSSNYDEEIVI HHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA