| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902616
Identifier: 160902616
GI number: 160902616
Start: 1239138
End: 1240406
Strand: Direct
Name: 160902616
Synonym: Pmob_1156
Alternate gene names: NA
Gene position: 1239138-1240406 (Clockwise)
Preceding gene: 160902605
Following gene: 160902617
Centisome position: 57.12
GC content: 33.41
Gene sequence:
>1269_bases ATGTTAGTGTACGTTTTAAACAAACATGGGGAACCTCTTATGCCTTGTAAATCTTCAAAGGCAAGAAAGCTACTTAAAGA TGGTAAAGCCAAGGTTGTTAGAAAAGAACCCTTTACTATTCAACTGCTCTATGGTAGTAGCGGTTATAAACAACCTATTA CTTTGGGAGTAGATGCAGGAAGTAAAACTGTAGGATTGTCTGCTACTACTAAAAAGAAAGAACTTTTTGCATCAGAAGTT GAAATAAGGGACGATATAACTAAACTTATATCTCAAAAACGACAGTATCGTAGAGATAGACGTTTAAGAAAAACAAGGTA CAGGAAACCACGCTTTTTAAATCGTGTTCACAGTAAGAACAAAGGATGGATTGCACCATCGGTAGAACATAAAATAAAAT CGCACATTAAACTGATTGATCTAGTTTATCGTTTGCTTCCTATTACAAAAATTGTAGTAGAAGTTGCAAGTTTCGATATA CAAAAGATTAAGAATCCTAATATTGAAGGCAAACAATACCAACAAGGTGAACAATTAGATTTTTGGAATGTAAGGGAATA TGTTCTATGGAGAGATAACTATACCTGCCAACACTGCAAAGGCAAAAGTAAAGATAAAAGACTCAATGTTCACCACATCG AAAGTAGACAAATAGGTGGAAACGCACCGAGTAATTTAATTACATTGTGTGAAACATGCCATAGAGATTATCATAATGGA AAGATTAAATTGAATTTTAAAAGAGGACAAAAGTTTAAAGATGCTACATTTATGGGTATTATGAGATGGACATTATACAA TAGATTGAAAGATTTGTATTCTAACGTTCATCTAACTTACGGATATATCACTAAAAATACAAGAATACAGAACAACCTAC CTAAAACACATAGAATAGACGCTTTATGTATTAGTGGTCATCCTCAAGCAAAACAATTAGATTACTATTATCACATTAAA GAAGTTAGACGACACAATAGACAAATACACAAAGCTAACATTCTAAAGGGAGGAACAAGGAAGCTTAACCAAGCACCTTA TCTAGTACATGGTTTTAGATTGTTTGATAAAGTAAGATACAACGGTATCGAATGTTTCATATTTGGGAGACGTTCAACTG GATATTTTGATATAAGGAAACTTGATGGTACAGTAATTCATAGAAGTGCAAAAAGCAAAGATTTAATCCTGGTAAGCAAA GCTAAAACTTTACTATGGGAAAGGAGAGAAAATTCTGCATTCCTCTCACCGCTTCCTTATCTGCCGTAA
Upstream 100 bases:
>100_bases TAGTGAGCTAAACGTAAAAAGCCTATATAACATTGGGGAAGGAGAATAACTCCGTTAAGGAAAAAGAAACGGGCTTCCGC CTATTAAGGAGGTACACTTT
Downstream 100 bases:
>100_bases GGCTGTGTGGCGGAAGCCCGTTTTCTAGTGAGTCTCCTGCAGATATTTTTCATGAAAATATTATTAGAAGGAGACAACCG AACTTCTCCAGAGCAATTCG
Product: HNH endonuclease
Products: NA
Alternate protein names: HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease-Like Protein; Metalloendopeptidase; Paclitaxel/Taxanoid Biosynthesis Susceptibility; Hnh Endonuclease; Glucose-6-Phosphate Dehydrogenase
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLVYVLNKHGEPLMPCKSSKARKLLKDGKAKVVRKEPFTIQLLYGSSGYKQPITLGVDAGSKTVGLSATTKKKELFASEV EIRDDITKLISQKRQYRRDRRLRKTRYRKPRFLNRVHSKNKGWIAPSVEHKIKSHIKLIDLVYRLLPITKIVVEVASFDI QKIKNPNIEGKQYQQGEQLDFWNVREYVLWRDNYTCQHCKGKSKDKRLNVHHIESRQIGGNAPSNLITLCETCHRDYHNG KIKLNFKRGQKFKDATFMGIMRWTLYNRLKDLYSNVHLTYGYITKNTRIQNNLPKTHRIDALCISGHPQAKQLDYYYHIK EVRRHNRQIHKANILKGGTRKLNQAPYLVHGFRLFDKVRYNGIECFIFGRRSTGYFDIRKLDGTVIHRSAKSKDLILVSK AKTLLWERRENSAFLSPLPYLP
Sequences:
>Translated_422_residues MLVYVLNKHGEPLMPCKSSKARKLLKDGKAKVVRKEPFTIQLLYGSSGYKQPITLGVDAGSKTVGLSATTKKKELFASEV EIRDDITKLISQKRQYRRDRRLRKTRYRKPRFLNRVHSKNKGWIAPSVEHKIKSHIKLIDLVYRLLPITKIVVEVASFDI QKIKNPNIEGKQYQQGEQLDFWNVREYVLWRDNYTCQHCKGKSKDKRLNVHHIESRQIGGNAPSNLITLCETCHRDYHNG KIKLNFKRGQKFKDATFMGIMRWTLYNRLKDLYSNVHLTYGYITKNTRIQNNLPKTHRIDALCISGHPQAKQLDYYYHIK EVRRHNRQIHKANILKGGTRKLNQAPYLVHGFRLFDKVRYNGIECFIFGRRSTGYFDIRKLDGTVIHRSAKSKDLILVSK AKTLLWERRENSAFLSPLPYLP >Mature_422_residues MLVYVLNKHGEPLMPCKSSKARKLLKDGKAKVVRKEPFTIQLLYGSSGYKQPITLGVDAGSKTVGLSATTKKKELFASEV EIRDDITKLISQKRQYRRDRRLRKTRYRKPRFLNRVHSKNKGWIAPSVEHKIKSHIKLIDLVYRLLPITKIVVEVASFDI QKIKNPNIEGKQYQQGEQLDFWNVREYVLWRDNYTCQHCKGKSKDKRLNVHHIESRQIGGNAPSNLITLCETCHRDYHNG KIKLNFKRGQKFKDATFMGIMRWTLYNRLKDLYSNVHLTYGYITKNTRIQNNLPKTHRIDALCISGHPQAKQLDYYYHIK EVRRHNRQIHKANILKGGTRKLNQAPYLVHGFRLFDKVRYNGIECFIFGRRSTGYFDIRKLDGTVIHRSAKSKDLILVSK AKTLLWERRENSAFLSPLPYLP
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49447; Mature: 49447
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVYVLNKHGEPLMPCKSSKARKLLKDGKAKVVRKEPFTIQLLYGSSGYKQPITLGVDAG CEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCC SKTVGLSATTKKKELFASEVEIRDDITKLISQKRQYRRDRRLRKTRYRKPRFLNRVHSKN CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC KGWIAPSVEHKIKSHIKLIDLVYRLLPITKIVVEVASFDIQKIKNPNIEGKQYQQGEQLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC FWNVREYVLWRDNYTCQHCKGKSKDKRLNVHHIESRQIGGNAPSNLITLCETCHRDYHNG CCCCEEEEEECCCCCHHCCCCCCCCCEECEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC KIKLNFKRGQKFKDATFMGIMRWTLYNRLKDLYSNVHLTYGYITKNTRIQNNLPKTHRID EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEECCCCCCCCCEE ALCISGHPQAKQLDYYYHIKEVRRHNRQIHKANILKGGTRKLNQAPYLVHGFRLFDKVRY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHCC NGIECFIFGRRSTGYFDIRKLDGTVIHRSAKSKDLILVSKAKTLLWERRENSAFLSPLPY CCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCEEEEECHHHHHHHHCCCCEEECCCCC LP CC >Mature Secondary Structure MLVYVLNKHGEPLMPCKSSKARKLLKDGKAKVVRKEPFTIQLLYGSSGYKQPITLGVDAG CEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCC SKTVGLSATTKKKELFASEVEIRDDITKLISQKRQYRRDRRLRKTRYRKPRFLNRVHSKN CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC KGWIAPSVEHKIKSHIKLIDLVYRLLPITKIVVEVASFDIQKIKNPNIEGKQYQQGEQLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC FWNVREYVLWRDNYTCQHCKGKSKDKRLNVHHIESRQIGGNAPSNLITLCETCHRDYHNG CCCCEEEEEECCCCCHHCCCCCCCCCEECEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC KIKLNFKRGQKFKDATFMGIMRWTLYNRLKDLYSNVHLTYGYITKNTRIQNNLPKTHRID EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEECCCCCCCCCEE ALCISGHPQAKQLDYYYHIKEVRRHNRQIHKANILKGGTRKLNQAPYLVHGFRLFDKVRY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHCC NGIECFIFGRRSTGYFDIRKLDGTVIHRSAKSKDLILVSKAKTLLWERRENSAFLSPLPY CCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCEEEEECHHHHHHHHCCCCEEECCCCC LP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA