Click here to switch to the map view.

The map label for this gene is 160902477

Identifier: 160902477

GI number: 160902477

Start: 1082297

End: 1082905

Strand: Direct

Name: 160902477

Synonym: Pmob_1014

Alternate gene names: NA

Gene position: 1082297-1082905 (Clockwise)

Preceding gene: 160902476

Following gene: 160902478

Centisome position: 49.89

GC content: 34.81

Gene sequence:

>609_bases
ATGCACAAAAAACGATACACTACTATTATAATGCTCTTAACGCTTTCGTTGGCAGCGTTCTCTTTATCCCCCTATGTAAA
TGTTAACAATCAAGAGGATGTCAAAGAAGATATAACTATTAAAACCGTTTTATTCGATTTTATTTCATCACAATACAAAC
TAGCAGTCGGGAAAGATATGCCACAAGATAGGTTGCAATTACTTGTTTCCTCCATTATGGAAGCTTCAAAAATCTTTGAA
ATATCCCCTTTGATGATAGCGGCAATAATAGACACTGAAACAAATTTCAAAAATATTATTGGCAGTTACGGAGAAGTAGG
TTACATGCAGCTTAGACCATCAACCGCGCAGTTTGTTGTAAACAAATATTATGACCTTTTTGCAAGCTTGAATTATACTG
AAACGAGTTTGGATTGGATTGAAGAAAGACTTTTATTAGATCCTAGGTACAACATACTTGTCGGGACAGCTTATTTGAAG
TATTTGATGGAAACTCACGGCGATCCTTACAAAGCCCTAGGGTGGTACAATGGCGGCGGAAATGATTATTACGCAAATAA
AGTAGTTTATAACATAAATAAGATTGCCATTAAATATCCCATTATTTAA

Upstream 100 bases:

>100_bases
AAAGCAGCACAAGGTTATGTTGAACTTTCACCTTACGGTGTTTATTTAATCAAAAAAAGTTGAAGGGATTGTGGGGGTCA
ATTAGAGAGGTGATACAAAA

Downstream 100 bases:

>100_bases
AAAAGCTATCTGACTTTTGTTCAAACAATTTATTTGATTGACATTGTTGCAAATATATGATAAAATTTTGTTAGTTGGTT
TGATTATTTGTTATAAACGG

Product: lytic transglycosylase

Products: NA

Alternate protein names: Transglycosylase SLT Domain Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MHKKRYTTIIMLLTLSLAAFSLSPYVNVNNQEDVKEDITIKTVLFDFISSQYKLAVGKDMPQDRLQLLVSSIMEASKIFE
ISPLMIAAIIDTETNFKNIIGSYGEVGYMQLRPSTAQFVVNKYYDLFASLNYTETSLDWIEERLLLDPRYNILVGTAYLK
YLMETHGDPYKALGWYNGGGNDYYANKVVYNINKIAIKYPII

Sequences:

>Translated_202_residues
MHKKRYTTIIMLLTLSLAAFSLSPYVNVNNQEDVKEDITIKTVLFDFISSQYKLAVGKDMPQDRLQLLVSSIMEASKIFE
ISPLMIAAIIDTETNFKNIIGSYGEVGYMQLRPSTAQFVVNKYYDLFASLNYTETSLDWIEERLLLDPRYNILVGTAYLK
YLMETHGDPYKALGWYNGGGNDYYANKVVYNINKIAIKYPII
>Mature_202_residues
MHKKRYTTIIMLLTLSLAAFSLSPYVNVNNQEDVKEDITIKTVLFDFISSQYKLAVGKDMPQDRLQLLVSSIMEASKIFE
ISPLMIAAIIDTETNFKNIIGSYGEVGYMQLRPSTAQFVVNKYYDLFASLNYTETSLDWIEERLLLDPRYNILVGTAYLK
YLMETHGDPYKALGWYNGGGNDYYANKVVYNINKIAIKYPII

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23163; Mature: 23163

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKKRYTTIIMLLTLSLAAFSLSPYVNVNNQEDVKEDITIKTVLFDFISSQYKLAVGKDM
CCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
PQDRLQLLVSSIMEASKIFEISPLMIAAIIDTETNFKNIIGSYGEVGYMQLRPSTAQFVV
CHHHHHHHHHHHHHHHHHEEECHHEEEEEECCCCCHHHHHCCCCCCCEEEECCCHHHHHH
NKYYDLFASLNYTETSLDWIEERLLLDPRYNILVGTAYLKYLMETHGDPYKALGWYNGGG
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCC
NDYYANKVVYNINKIAIKYPII
CCEECCEEEEEEEEEEEEECCC
>Mature Secondary Structure
MHKKRYTTIIMLLTLSLAAFSLSPYVNVNNQEDVKEDITIKTVLFDFISSQYKLAVGKDM
CCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
PQDRLQLLVSSIMEASKIFEISPLMIAAIIDTETNFKNIIGSYGEVGYMQLRPSTAQFVV
CHHHHHHHHHHHHHHHHHEEECHHEEEEEECCCCCHHHHHCCCCCCCEEEECCCHHHHHH
NKYYDLFASLNYTETSLDWIEERLLLDPRYNILVGTAYLKYLMETHGDPYKALGWYNGGG
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCC
NDYYANKVVYNINKIAIKYPII
CCEECCEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA