| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902449
Identifier: 160902449
GI number: 160902449
Start: 1046627
End: 1048249
Strand: Direct
Name: 160902449
Synonym: Pmob_0985
Alternate gene names: NA
Gene position: 1046627-1048249 (Clockwise)
Preceding gene: 160902448
Following gene: 160902450
Centisome position: 48.24
GC content: 37.4
Gene sequence:
>1623_bases ATGAAAAAAATTCTTGGAGCTTCTATGGGAAGTGATGTACATACAGCAGGTATTTTAAACTTTTTGGAATTGGCACGAAA TGAAGGATATGAGGTTATTTACTTAGGTGGAGCGGTTCCGATCGAGAAAATTATTAAAAAGATAGATGAAGAAACCCCTG ATGTAGTTTCAATAAGTTACCGGTTGGGAGCCGATGCCTTCGAAAATCTTATAAAAGAATTTATAGAAAAGGCTAAAAAA TTAAAAAACTATGAAAAAATTGATTTTATCTTCGGAGGAACGATTGAAACCTCACAGGTTGCAAGAAAATACAACTTCTT CAAAAAGATCTTTGATGGTTCAGAGGAAGAAGAAGATGTGGTTTTATTTTTAAGAGGTCAAATCAAATATAAAGAAGAGG AAAATTTCCCATCAACCTTAGCTGAAAGGATTGAATTTAAATCCCCATATCCGCTAATTAGACACCATATTGGACTTCAA ACAATGGAGGAAACCATAGAGGAAATCAAAAAACTTGCAGAATCCGAACTCTTGGATATCATCTCTTTGGCACCGGATCA AAACTGCCAACAATACTTTTTTGATCAAGAAAAGATGGACCCCAACCAAGACGGGGCAGGAGGAGATCCTATTAGAAATG AAAAAGATTTTGTTACCATGTATGAAGCAAGTAGAAGAGGGAATTATCCTTTGGTAAGATGTTACTCAGGAACCAACCAC ATGGTCGAATTTTCCCAAGTGTTAAAAAGAACTGTCAACAACGCATGGGCAGCGATACCCATTTTTTGGTATTCTGAACT TGATAGAAGATCCGAAAGGAACTTATTAGATGCGATAAAAGAAAATATGGAAGGAATAAAGTGGAACGCCAGGAACAACA TACCGGTAGAAATTAACGACGCCCACCAATGGGAACTAAGGTACGCGCACGACAGTTTAGCTGTTGCAACTACTTATTTA GCTGCTTATGTAGCCAAAAAACTTGGGGTAAGATGGTATGTTCAACAATATATGATGAACACTCCTCCAAAGTTATCTCC AAAGATGGATATAGCTAAGTCTTTAGCCAAATTAGAATTGGTAGAGACCCTAAAGGATGAAACCTTTACACCTTACAGAA TGGTTAGAACTGGACTCCTTTCTTTTCCAGCCGACCCAAACAGCGCAATGGGTCAACTTGTTTCTTCCATGTTTTATTCA TCTTACTTACAACCACATATAATCCATGTGGTGGCGTACTGTGAAGCAATGAAAAGGGCGACTTCAAAAGAAATAATAGA AAGTGTGAAGATGGTAAAAAGGGCAAACTCTTTAGCATCTCGTGGATTACCTGATTTTGCCAGTGATCCCGAGATCAAAG CAAGGGTAAATTTATTGAAAGAAGAAGCCATGGTCATAATAGAAAAAATTAAAAGTCTCTCTCCTCAAAAAGAGGATCCT TTAACCGATCCTGAAACTCTTTATTTAGCGGTAAAAAAAGGGATTTTAGATGCAGTAGGTTTACAAGGCAACTCTGTTGC CAAAGGACAAATAAAATCCGCTGTAATTAATGGAGCTTACGAGGCCATAAATGAAAACGGCGAAGTGCTAAGAGAAGCTG AAAGAAACCGTGGAATAAAGTAA
Upstream 100 bases:
>100_bases TGGGGAAAAATTTTTGGAAAGAAGGTAGAACGGTAAAAGATTTGGGCTTAGAAGGAATGAGCATAGAAGATATAATAAGA CTTGTTGAGGAGGGAGAATC
Downstream 100 bases:
>100_bases ATTAGAATTATCCAGAAACTTGAGGAGATGGAAAAAATGGATTCTATAAAAATAAATACCTTAATTAGATGTATCGAAGA CCTTCGTATGAAACTGAATA
Product: cobalamin B12-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MKKILGASMGSDVHTAGILNFLELARNEGYEVIYLGGAVPIEKIIKKIDEETPDVVSISYRLGADAFENLIKEFIEKAKK LKNYEKIDFIFGGTIETSQVARKYNFFKKIFDGSEEEEDVVLFLRGQIKYKEEENFPSTLAERIEFKSPYPLIRHHIGLQ TMEETIEEIKKLAESELLDIISLAPDQNCQQYFFDQEKMDPNQDGAGGDPIRNEKDFVTMYEASRRGNYPLVRCYSGTNH MVEFSQVLKRTVNNAWAAIPIFWYSELDRRSERNLLDAIKENMEGIKWNARNNIPVEINDAHQWELRYAHDSLAVATTYL AAYVAKKLGVRWYVQQYMMNTPPKLSPKMDIAKSLAKLELVETLKDETFTPYRMVRTGLLSFPADPNSAMGQLVSSMFYS SYLQPHIIHVVAYCEAMKRATSKEIIESVKMVKRANSLASRGLPDFASDPEIKARVNLLKEEAMVIIEKIKSLSPQKEDP LTDPETLYLAVKKGILDAVGLQGNSVAKGQIKSAVINGAYEAINENGEVLREAERNRGIK
Sequences:
>Translated_540_residues MKKILGASMGSDVHTAGILNFLELARNEGYEVIYLGGAVPIEKIIKKIDEETPDVVSISYRLGADAFENLIKEFIEKAKK LKNYEKIDFIFGGTIETSQVARKYNFFKKIFDGSEEEEDVVLFLRGQIKYKEEENFPSTLAERIEFKSPYPLIRHHIGLQ TMEETIEEIKKLAESELLDIISLAPDQNCQQYFFDQEKMDPNQDGAGGDPIRNEKDFVTMYEASRRGNYPLVRCYSGTNH MVEFSQVLKRTVNNAWAAIPIFWYSELDRRSERNLLDAIKENMEGIKWNARNNIPVEINDAHQWELRYAHDSLAVATTYL AAYVAKKLGVRWYVQQYMMNTPPKLSPKMDIAKSLAKLELVETLKDETFTPYRMVRTGLLSFPADPNSAMGQLVSSMFYS SYLQPHIIHVVAYCEAMKRATSKEIIESVKMVKRANSLASRGLPDFASDPEIKARVNLLKEEAMVIIEKIKSLSPQKEDP LTDPETLYLAVKKGILDAVGLQGNSVAKGQIKSAVINGAYEAINENGEVLREAERNRGIK >Mature_540_residues MKKILGASMGSDVHTAGILNFLELARNEGYEVIYLGGAVPIEKIIKKIDEETPDVVSISYRLGADAFENLIKEFIEKAKK LKNYEKIDFIFGGTIETSQVARKYNFFKKIFDGSEEEEDVVLFLRGQIKYKEEENFPSTLAERIEFKSPYPLIRHHIGLQ TMEETIEEIKKLAESELLDIISLAPDQNCQQYFFDQEKMDPNQDGAGGDPIRNEKDFVTMYEASRRGNYPLVRCYSGTNH MVEFSQVLKRTVNNAWAAIPIFWYSELDRRSERNLLDAIKENMEGIKWNARNNIPVEINDAHQWELRYAHDSLAVATTYL AAYVAKKLGVRWYVQQYMMNTPPKLSPKMDIAKSLAKLELVETLKDETFTPYRMVRTGLLSFPADPNSAMGQLVSSMFYS SYLQPHIIHVVAYCEAMKRATSKEIIESVKMVKRANSLASRGLPDFASDPEIKARVNLLKEEAMVIIEKIKSLSPQKEDP LTDPETLYLAVKKGILDAVGLQGNSVAKGQIKSAVINGAYEAINENGEVLREAERNRGIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61344; Mature: 61344
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILGASMGSDVHTAGILNFLELARNEGYEVIYLGGAVPIEKIIKKIDEETPDVVSISY CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEH RLGADAFENLIKEFIEKAKKLKNYEKIDFIFGGTIETSQVARKYNFFKKIFDGSEEEEDV HCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCE VLFLRGQIKYKEEENFPSTLAERIEFKSPYPLIRHHIGLQTMEETIEEIKKLAESELLDI EEEEECCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISLAPDQNCQQYFFDQEKMDPNQDGAGGDPIRNEKDFVTMYEASRRGNYPLVRCYSGTNH HHCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCEEHHHHHCCCCCCEEEEECCCCH MVEFSQVLKRTVNNAWAAIPIFWYSELDRRSERNLLDAIKENMEGIKWNARNNIPVEIND HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC AHQWELRYAHDSLAVATTYLAAYVAKKLGVRWYVQQYMMNTPPKLSPKMDIAKSLAKLEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VETLKDETFTPYRMVRTGLLSFPADPNSAMGQLVSSMFYSSYLQPHIIHVVAYCEAMKRA HHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TSKEIIESVKMVKRANSLASRGLPDFASDPEIKARVNLLKEEAMVIIEKIKSLSPQKEDP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LTDPETLYLAVKKGILDAVGLQGNSVAKGQIKSAVINGAYEAINENGEVLREAERNRGIK CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKKILGASMGSDVHTAGILNFLELARNEGYEVIYLGGAVPIEKIIKKIDEETPDVVSISY CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEH RLGADAFENLIKEFIEKAKKLKNYEKIDFIFGGTIETSQVARKYNFFKKIFDGSEEEEDV HCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCE VLFLRGQIKYKEEENFPSTLAERIEFKSPYPLIRHHIGLQTMEETIEEIKKLAESELLDI EEEEECCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISLAPDQNCQQYFFDQEKMDPNQDGAGGDPIRNEKDFVTMYEASRRGNYPLVRCYSGTNH HHCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCEEHHHHHCCCCCCEEEEECCCCH MVEFSQVLKRTVNNAWAAIPIFWYSELDRRSERNLLDAIKENMEGIKWNARNNIPVEIND HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC AHQWELRYAHDSLAVATTYLAAYVAKKLGVRWYVQQYMMNTPPKLSPKMDIAKSLAKLEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VETLKDETFTPYRMVRTGLLSFPADPNSAMGQLVSSMFYSSYLQPHIIHVVAYCEAMKRA HHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TSKEIIESVKMVKRANSLASRGLPDFASDPEIKARVNLLKEEAMVIIEKIKSLSPQKEDP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LTDPETLYLAVKKGILDAVGLQGNSVAKGQIKSAVINGAYEAINENGEVLREAERNRGIK CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA