Click here to switch to the map view.

The map label for this gene is odh [H]

Identifier: 160902448

GI number: 160902448

Start: 1045545

End: 1046630

Strand: Direct

Name: odh [H]

Synonym: Pmob_0984

Alternate gene names: 160902448

Gene position: 1045545-1046630 (Clockwise)

Preceding gene: 160902446

Following gene: 160902449

Centisome position: 48.19

GC content: 38.58

Gene sequence:

>1086_bases
ATGGTTAAGATAGCGGTAGTTGGAGCGGGGAATGGAGGCCAGGCATTAGCTGGATATTTAGCCATGAAAGGCTTCGATGT
ATCTCTCTTTAATAGATCAAAAAGAAGAATATCTCCCATCATAGACTCACATTCAATAAAAATAGAAGGTCAAGTAGTAG
GTGAATATCATATATCTTTTGCCACAACAAATATGGAAGAAGCGATAAAGGGCAGAAAGTTGATTATGGTAGTTGTTCCT
GCCTTCGCACATAAAGAGATAGCAAAGAGGATGGCTCCTTATTTAGAAGATGGTCAAATAATAGTGTTGAACCCTGGCAG
GACAGGTGGTGCTTTAGAATTCAACAATGTATTGAAAGAAGAGAACGTGAAAAAAGACGTTATAGTAGCTGAAGCCCAAA
CTTTCATTTTTGCCTCAAGAATGTCCAATCCAGGGGTGGCTAAAGTGTTTAGAATAAAAAATGCCGTTCCTGTTTCTGCA
CTACCCGCCACCAGAAATGCCGAATTAGAAGAAGTATTGTGTAATGCAATACCTGAGTTTGAAATAGTTAAGAATGTAAT
TTACACTAGTTTTAACAATATTGGCGTTGTTTTTCACCCGGCAACGTTAATACTGAACGCAGCAAGGGTTGAAACAACGG
CAGGAAAGTTTGAATTCTACTTCGAAGGGATCTCCCCTTCCGTAGCAAAAGTTTTGGAAAAGATAGATGAGGAAAGATGT
AAGGTTATGGAGCTTTTTAACGCGGAACCTATGACTGCAAAGGATTGGCTAAACTATGCATACGATGTAAGAGGAAACTC
TCTATACGAAGCTATTAGGAACAATGTTGGTTATAGGGGCATATATGCACCGCCAACGTTGGATAACAGGTATATTCTTG
AAGATCTTCCAATGAGTCTTGTACCTATCTCATCTTTTGGAGAAGAATATGGTGTGAAGACCCCTGTAATCGATTCTATT
ATAAATCTTGCCAATATAATGATGGGGAAAAATTTTTGGAAAGAAGGTAGAACGGTAAAAGATTTGGGCTTAGAAGGAAT
GAGCATAGAAGATATAATAAGACTTGTTGAGGAGGGAGAATCATGA

Upstream 100 bases:

>100_bases
ATGATGTAAAATATATAATGAAAAGGTAATTTTTGCAACAATCAATTTATCTTGCTATAATATATATCTACACAGTGAAT
TACAATATGGAGGTGGTTAC

Downstream 100 bases:

>100_bases
AAAAAATTCTTGGAGCTTCTATGGGAAGTGATGTACATACAGCAGGTATTTTAAACTTTTTGGAATTGGCACGAAATGAA
GGATATGAGGTTATTTACTT

Product: NAD/NADP octopine/nopaline dehydrogenase

Products: NA

Alternate protein names: N-(1-D-carboxyethyl)-L-norvaline dehydrogenase [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MVKIAVVGAGNGGQALAGYLAMKGFDVSLFNRSKRRISPIIDSHSIKIEGQVVGEYHISFATTNMEEAIKGRKLIMVVVP
AFAHKEIAKRMAPYLEDGQIIVLNPGRTGGALEFNNVLKEENVKKDVIVAEAQTFIFASRMSNPGVAKVFRIKNAVPVSA
LPATRNAELEEVLCNAIPEFEIVKNVIYTSFNNIGVVFHPATLILNAARVETTAGKFEFYFEGISPSVAKVLEKIDEERC
KVMELFNAEPMTAKDWLNYAYDVRGNSLYEAIRNNVGYRGIYAPPTLDNRYILEDLPMSLVPISSFGEEYGVKTPVIDSI
INLANIMMGKNFWKEGRTVKDLGLEGMSIEDIIRLVEEGES

Sequences:

>Translated_361_residues
MVKIAVVGAGNGGQALAGYLAMKGFDVSLFNRSKRRISPIIDSHSIKIEGQVVGEYHISFATTNMEEAIKGRKLIMVVVP
AFAHKEIAKRMAPYLEDGQIIVLNPGRTGGALEFNNVLKEENVKKDVIVAEAQTFIFASRMSNPGVAKVFRIKNAVPVSA
LPATRNAELEEVLCNAIPEFEIVKNVIYTSFNNIGVVFHPATLILNAARVETTAGKFEFYFEGISPSVAKVLEKIDEERC
KVMELFNAEPMTAKDWLNYAYDVRGNSLYEAIRNNVGYRGIYAPPTLDNRYILEDLPMSLVPISSFGEEYGVKTPVIDSI
INLANIMMGKNFWKEGRTVKDLGLEGMSIEDIIRLVEEGES
>Mature_361_residues
MVKIAVVGAGNGGQALAGYLAMKGFDVSLFNRSKRRISPIIDSHSIKIEGQVVGEYHISFATTNMEEAIKGRKLIMVVVP
AFAHKEIAKRMAPYLEDGQIIVLNPGRTGGALEFNNVLKEENVKKDVIVAEAQTFIFASRMSNPGVAKVFRIKNAVPVSA
LPATRNAELEEVLCNAIPEFEIVKNVIYTSFNNIGVVFHPATLILNAARVETTAGKFEFYFEGISPSVAKVLEKIDEERC
KVMELFNAEPMTAKDWLNYAYDVRGNSLYEAIRNNVGYRGIYAPPTLDNRYILEDLPMSLVPISSFGEEYGVKTPVIDSI
INLANIMMGKNFWKEGRTVKDLGLEGMSIEDIIRLVEEGES

Specific function: In the forward direction acts also on secondary amine dicarboxylates such as N-(1-carboxyethyl)methionine and N-(1- carboxyethyl)phenylalanine. In the reverse direction, the enzyme also acts on neutral amino acids as an amino donor. They include L-amino a

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysopine/nopaline/octopine/opine/vitopine dehydrogenases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR011128
- InterPro:   IPR016040
- InterPro:   IPR003421 [H]

Pfam domain/function: PF01210 NAD_Gly3P_dh_N; PF02317 Octopine_DH [H]

EC number: =1.5.1.28 [H]

Molecular weight: Translated: 39948; Mature: 39948

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIAVVGAGNGGQALAGYLAMKGFDVSLFNRSKRRISPIIDSHSIKIEGQVVGEYHISF
CEEEEEEECCCCCHHHHHHHHHCCCEEHHHCCCHHHHHHCCCCCEEEEEEEEEEEEEEEE
ATTNMEEAIKGRKLIMVVVPAFAHKEIAKRMAPYLEDGQIIVLNPGRTGGALEFNNVLKE
EECCHHHHHCCCEEEEEEECCHHHHHHHHHHCCHHCCCEEEEECCCCCCCCCHHHHHHHH
ENVKKDVIVAEAQTFIFASRMSNPGVAKVFRIKNAVPVSALPATRNAELEEVLCNAIPEF
CCCCCCEEEEHHHHHHEEHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCH
EIVKNVIYTSFNNIGVVFHPATLILNAARVETTAGKFEFYFEGISPSVAKVLEKIDEERC
HHHHHHHHHCCCCCEEEEECHHHEEEHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
KVMELFNAEPMTAKDWLNYAYDVRGNSLYEAIRNNVGYRGIYAPPTLDNRYILEDLPMSL
HHHHHHCCCCCCHHHHHHHEEECCCHHHHHHHHHCCCCCEEECCCCCCCCEEHHHCCCCE
VPISSFGEEYGVKTPVIDSIINLANIMMGKNFWKEGRTVKDLGLEGMSIEDIIRLVEEGE
EEHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEHHCCCCCCCHHHHHHHHHCCC
S
C
>Mature Secondary Structure
MVKIAVVGAGNGGQALAGYLAMKGFDVSLFNRSKRRISPIIDSHSIKIEGQVVGEYHISF
CEEEEEEECCCCCHHHHHHHHHCCCEEHHHCCCHHHHHHCCCCCEEEEEEEEEEEEEEEE
ATTNMEEAIKGRKLIMVVVPAFAHKEIAKRMAPYLEDGQIIVLNPGRTGGALEFNNVLKE
EECCHHHHHCCCEEEEEEECCHHHHHHHHHHCCHHCCCEEEEECCCCCCCCCHHHHHHHH
ENVKKDVIVAEAQTFIFASRMSNPGVAKVFRIKNAVPVSALPATRNAELEEVLCNAIPEF
CCCCCCEEEEHHHHHHEEHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCH
EIVKNVIYTSFNNIGVVFHPATLILNAARVETTAGKFEFYFEGISPSVAKVLEKIDEERC
HHHHHHHHHCCCCCEEEEECHHHEEEHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
KVMELFNAEPMTAKDWLNYAYDVRGNSLYEAIRNNVGYRGIYAPPTLDNRYILEDLPMSL
HHHHHHCCCCCCHHHHHHHEEECCCHHHHHHHHHCCCCCEEECCCCCCCCEEHHHCCCCE
VPISSFGEEYGVKTPVIDSIINLANIMMGKNFWKEGRTVKDLGLEGMSIEDIIRLVEEGE
EEHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEHHCCCCCCCHHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7487048; 2753861; 9665174 [H]