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The map label for this gene is rbsK [H]

Identifier: 160902389

GI number: 160902389

Start: 977700

End: 978617

Strand: Direct

Name: rbsK [H]

Synonym: Pmob_0924

Alternate gene names: 160902389

Gene position: 977700-978617 (Clockwise)

Preceding gene: 160902388

Following gene: 160902392

Centisome position: 45.06

GC content: 33.88

Gene sequence:

>918_bases
ATGATCGCTGTAATTGGTAGCAGTAACATGGATATTGTATTCAACGTTGAACATTTTACACTTCCTGGAGAAACCCAAAA
AGCCCTTTCCTTGGACTTTTATTTTGGGGGCAAAGGGGCAAATCAAGCAGTTGCAGCCGCTAAGTTATCTGAAAAGCCTG
TTTACTTTTGTAGCTGCCTAGGTGATGACGAATATGGGAATCAAATTTCTCAAAACTTTAAAAAGTATAAAATAGAAGGT
TATTACGTGCAAAAGAATGAAAAAACAGGTAGGGCTTATATAGAGGTTGATAAAAATGGCGAAAATAGAATAATTATCTT
CTCGGGTGCCAACGATAATGTGGACAAAGAGAAAATAGATAAGTTTTTTGATCAATATGGTGATGAAATAGATATTTGTT
TATTGCAGAATGAAATTCCCATGCAAAGCGTTGAGTACGCTATTTCTAAGTTAAAAGAAAAAAGGATAACTATTATTTAC
GATCCTGCCCCTGTTGGAAATACAAAGATAGAAAGTTTAAACGGTATAGATTTTTTAACTCCCAATATTAAAGAGTTTAT
GTTCCTTTGTGAAAAAGAAAAGATAGATTTCGACGAAAACAACCTCGACAAATCAATGCTTGAATTTAAAAGAATTAGCA
AGGTAAAAAATTTGATTGTAAAGATGGGAGATAAAGGCGTTATATACATTGATGAAGATGAAAACTTAGCGAAAATTGAA
CCTCTAAAAATAAAAGCTGTTGATAGTACCGGTGCAGGAGACATCTTTAATGGAGCATTTGCCGTAGCTTTTTCAGAAAC
AAAAGATTTAAAGAAAAGCCTTAACTTTGCCAATACCGCCGCCGCAATTTCTGTTGAAAGAAAAGGAGCTCAGTCTTCAA
TCCCTAAAAAGGAAGAAGTATTAAAACGCTTTTTATGA

Upstream 100 bases:

>100_bases
GACAATTTACTTCCCCGTTCCACTTCAATTGGTAACAAAATAACTTAAAAAGGGGCTTTATGCCCCTTTTACTGAAACTA
TCCAAAGGAGAGATAACCTC

Downstream 100 bases:

>100_bases
ATTATTACTGTACAATTGATGCAAAACACCGTTTTTCCTCAAAGGAACGAATAATTTAAACATGAAAATTAGTGCGAGCG
TATAAAACACTGAACTAATT

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MIAVIGSSNMDIVFNVEHFTLPGETQKALSLDFYFGGKGANQAVAAAKLSEKPVYFCSCLGDDEYGNQISQNFKKYKIEG
YYVQKNEKTGRAYIEVDKNGENRIIIFSGANDNVDKEKIDKFFDQYGDEIDICLLQNEIPMQSVEYAISKLKEKRITIIY
DPAPVGNTKIESLNGIDFLTPNIKEFMFLCEKEKIDFDENNLDKSMLEFKRISKVKNLIVKMGDKGVIYIDEDENLAKIE
PLKIKAVDSTGAGDIFNGAFAVAFSETKDLKKSLNFANTAAAISVERKGAQSSIPKKEEVLKRFL

Sequences:

>Translated_305_residues
MIAVIGSSNMDIVFNVEHFTLPGETQKALSLDFYFGGKGANQAVAAAKLSEKPVYFCSCLGDDEYGNQISQNFKKYKIEG
YYVQKNEKTGRAYIEVDKNGENRIIIFSGANDNVDKEKIDKFFDQYGDEIDICLLQNEIPMQSVEYAISKLKEKRITIIY
DPAPVGNTKIESLNGIDFLTPNIKEFMFLCEKEKIDFDENNLDKSMLEFKRISKVKNLIVKMGDKGVIYIDEDENLAKIE
PLKIKAVDSTGAGDIFNGAFAVAFSETKDLKKSLNFANTAAAISVERKGAQSSIPKKEEVLKRFL
>Mature_305_residues
MIAVIGSSNMDIVFNVEHFTLPGETQKALSLDFYFGGKGANQAVAAAKLSEKPVYFCSCLGDDEYGNQISQNFKKYKIEG
YYVQKNEKTGRAYIEVDKNGENRIIIFSGANDNVDKEKIDKFFDQYGDEIDICLLQNEIPMQSVEYAISKLKEKRITIIY
DPAPVGNTKIESLNGIDFLTPNIKEFMFLCEKEKIDFDENNLDKSMLEFKRISKVKNLIVKMGDKGVIYIDEDENLAKIE
PLKIKAVDSTGAGDIFNGAFAVAFSETKDLKKSLNFANTAAAISVERKGAQSSIPKKEEVLKRFL

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=311, Percent_Identity=30.8681672025724, Blast_Score=113, Evalue=2e-25,
Organism=Escherichia coli, GI1790193, Length=301, Percent_Identity=33.5548172757475, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1788017, Length=209, Percent_Identity=22.488038277512, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17532905, Length=314, Percent_Identity=30.8917197452229, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6319884, Length=329, Percent_Identity=27.6595744680851, Blast_Score=108, Evalue=9e-25,
Organism=Drosophila melanogaster, GI20128807, Length=306, Percent_Identity=29.0849673202614, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24583886, Length=305, Percent_Identity=26.5573770491803, Blast_Score=95, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 34238; Mature: 34238

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVIGSSNMDIVFNVEHFTLPGETQKALSLDFYFGGKGANQAVAAAKLSEKPVYFCSCL
CEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEC
GDDEYGNQISQNFKKYKIEGYYVQKNEKTGRAYIEVDKNGENRIIIFSGANDNVDKEKID
CCCCCCHHHHHCHHEEEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHH
KFFDQYGDEIDICLLQNEIPMQSVEYAISKLKEKRITIIYDPAPVGNTKIESLNGIDFLT
HHHHHHCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCEECC
PNIKEFMFLCEKEKIDFDENNLDKSMLEFKRISKVKNLIVKMGDKGVIYIDEDENLAKIE
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCEEEEC
PLKIKAVDSTGAGDIFNGAFAVAFSETKDLKKSLNFANTAAAISVERKGAQSSIPKKEEV
CEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHH
LKRFL
HHHCC
>Mature Secondary Structure
MIAVIGSSNMDIVFNVEHFTLPGETQKALSLDFYFGGKGANQAVAAAKLSEKPVYFCSCL
CEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEC
GDDEYGNQISQNFKKYKIEGYYVQKNEKTGRAYIEVDKNGENRIIIFSGANDNVDKEKID
CCCCCCHHHHHCHHEEEEEEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHH
KFFDQYGDEIDICLLQNEIPMQSVEYAISKLKEKRITIIYDPAPVGNTKIESLNGIDFLT
HHHHHHCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCCEECC
PNIKEFMFLCEKEKIDFDENNLDKSMLEFKRISKVKNLIVKMGDKGVIYIDEDENLAKIE
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCEEEEC
PLKIKAVDSTGAGDIFNGAFAVAFSETKDLKKSLNFANTAAAISVERKGAQSSIPKKEEV
CEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHH
LKRFL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]