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The map label for this gene is rpfG [H]

Identifier: 160902324

GI number: 160902324

Start: 908585

End: 910642

Strand: Direct

Name: rpfG [H]

Synonym: Pmob_0859

Alternate gene names: 160902324

Gene position: 908585-910642 (Clockwise)

Preceding gene: 160902322

Following gene: 160902325

Centisome position: 41.88

GC content: 32.02

Gene sequence:

>2058_bases
TTGGATAATAACGCGCTTGATTTTGTTTTATCAAATTATGATTCACTTTTTTTGGAAACTCCTATTGTGTATGCGGGGAT
CAACTACTATCAAGAATACGATTTGAGTGAATTAGAATTTGTCAGTGGCGTTGTAGAGATTCATGATATAAAAGAAACGT
TAGAATTAGCACTAAATCTCCATCCAGCCACAGAGAATGTTTATGTAATTGTTGATAATCAGACTAAAACCGGGGAACTT
TTCAAGCAAGAAGTGGAAAATGATGTAGTACCTAATTTTGAGAATACTAATTTTATCTTTTTAAGCGATTCATTGGATCA
AATAAAGCAAGAGCTCGATGCACCATTACAAAACTCAATAGTGCTCCTTTTGGCTTTTAGTAAAGATATTTATGGAAATT
TTTATGATTATACACAAGTAGAACAATATATGGGACAATTTGATAAACTTCCTATTTATACTACATCAAGCGTGTATATG
GGCAATAACGTTGTAGGAGGTAAAATTACCAGTGCATACGATCAAGGACGTAAAGCTGGGGAGATAGCAATAAACTTATT
AAGTGGAGTTGATATTACAGAGCTGCCAAGAACTTACTTCCCTGATAATAAATACGTTTTTAACTTTCCTGCCTTGGAAA
GATTTGGTATTTCAATCAATAGACTACCAGCAGATTCAATAATCCAGAACAAACCTCCTTCTTTTTATGAAAATTACCCT
GTTATTTTTTGGATAATAATGATTCTAGTACCTTTTTCTATTGTATTTATATATGTTCTAAGGGAAGAAAATTTAAAACT
TCACTCTCTTTTGAGTGAATTAAATGATGCAAAGGAAGAGGCCCAAAGTTATAATGAAGAACTTACCGCAGCAAATGAAC
AATTAACTTCCTACAACGAAGAGTTAATAGCACAAAATGAGGAAATAGAAAGTAATTATCAGGAAATAGAACAACTGAAT
AATAAAATAATTCATCTGTTGGAAATTATATCCGAAGTTGAAAATGAAGAAGTAAAAGAGGAAGATTTCTTCCAGAAATT
TTTAAATACTTTAATCATAGAAATCCCAGAAGCTGATTATGGCAGTGTTTCTATAATAGAGGGAGATAGTTGGAGATTTT
TAGTAACGTTGGGTCATGATATTAATGGTCTAAAAAGTTTAAATCTTAAAAAAAGTTATGCTTTTATTGCTGAAAAATCG
ATGGTACTTGATAACGTAATTTCATTGGATGAAGAAAAAATGCCTAAAGATGTAGCAAATTTAATGTACAAATTTACCAA
ACCGATAAAATCCTCTCTACTGAAAACAATAAAAATAGATGAAAATCGGTATTTAGATATTTCACTTGATATTAAAAAGG
ATAGCGATGAGAATTTTTCTGAAGAATCCGTTAGATTTTTTGATTCATTGTTAAATGTGGCAAAAATGTTTTTTGTCAAC
AGATTAAGAACGCAAGAGGTAAAAAATGCTTATGCAACCTTTGCAAGTAAACTTTCTATATTGGCAGAATCACACGATGA
AAACAGTAAGAAACATATCTACCGTGTAAGTGAATTATCTGCATTTTTTGCAGAAAAATTAGGTTTCCCCAAAGAACACG
TTGAAAAAATAAGAGATTTTTCTCCACTTCACGATGTGGGGAAACTTTTTATTCCTGCCGAGATTCTTAATAAACCTGGT
AAACTTAATGAACAAGAATGGGAAGAAGTGAGGAAACATCCACTATATGCCGATAATTTGTTGGATGATCCATATTTTGA
AACAGCAAGAAAAATTGCCCTTTACCATCACGAACATTACGATGGCTCTGGGTATCCCTTTAGATTAAGGGGTGAGCTGA
TTCCCATTGAGGCTCAGATCGTTGGCTTGGTAGATGTATACGATGCATTAAGATCAAAAAGAAGTTATAAAGCAGCTTTT
TCACATAGGGAAGCCATTGACATATTGTTAAATGGGGATCACAGGACAAAACCAGATCATTTTAACCCAAGACTCTTAGA
AATCTTGAAAAAATACGAAAAAGAAATAGAGGAAATGTATAAAAAATATGAAGAATAA

Upstream 100 bases:

>100_bases
ATCTTGATAGCAAAAGGTTTGGCGATGATAATAGCCTAAACATATTCAAAGAATATTTTGAAAAAAATTTAGTAATTTTA
CATTTGATGTCGTTATTGCG

Downstream 100 bases:

>100_bases
AAAACAAATTTTAATTGGAGGCCCTAAAATGGAAAACTCAAAAATAGACTCAAAAACAAAAAAACATTTATTAAATTTCC
AAAAGGCTGAGTTAACGGAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MDNNALDFVLSNYDSLFLETPIVYAGINYYQEYDLSELEFVSGVVEIHDIKETLELALNLHPATENVYVIVDNQTKTGEL
FKQEVENDVVPNFENTNFIFLSDSLDQIKQELDAPLQNSIVLLLAFSKDIYGNFYDYTQVEQYMGQFDKLPIYTTSSVYM
GNNVVGGKITSAYDQGRKAGEIAINLLSGVDITELPRTYFPDNKYVFNFPALERFGISINRLPADSIIQNKPPSFYENYP
VIFWIIMILVPFSIVFIYVLREENLKLHSLLSELNDAKEEAQSYNEELTAANEQLTSYNEELIAQNEEIESNYQEIEQLN
NKIIHLLEIISEVENEEVKEEDFFQKFLNTLIIEIPEADYGSVSIIEGDSWRFLVTLGHDINGLKSLNLKKSYAFIAEKS
MVLDNVISLDEEKMPKDVANLMYKFTKPIKSSLLKTIKIDENRYLDISLDIKKDSDENFSEESVRFFDSLLNVAKMFFVN
RLRTQEVKNAYATFASKLSILAESHDENSKKHIYRVSELSAFFAEKLGFPKEHVEKIRDFSPLHDVGKLFIPAEILNKPG
KLNEQEWEEVRKHPLYADNLLDDPYFETARKIALYHHEHYDGSGYPFRLRGELIPIEAQIVGLVDVYDALRSKRSYKAAF
SHREAIDILLNGDHRTKPDHFNPRLLEILKKYEKEIEEMYKKYEE

Sequences:

>Translated_685_residues
MDNNALDFVLSNYDSLFLETPIVYAGINYYQEYDLSELEFVSGVVEIHDIKETLELALNLHPATENVYVIVDNQTKTGEL
FKQEVENDVVPNFENTNFIFLSDSLDQIKQELDAPLQNSIVLLLAFSKDIYGNFYDYTQVEQYMGQFDKLPIYTTSSVYM
GNNVVGGKITSAYDQGRKAGEIAINLLSGVDITELPRTYFPDNKYVFNFPALERFGISINRLPADSIIQNKPPSFYENYP
VIFWIIMILVPFSIVFIYVLREENLKLHSLLSELNDAKEEAQSYNEELTAANEQLTSYNEELIAQNEEIESNYQEIEQLN
NKIIHLLEIISEVENEEVKEEDFFQKFLNTLIIEIPEADYGSVSIIEGDSWRFLVTLGHDINGLKSLNLKKSYAFIAEKS
MVLDNVISLDEEKMPKDVANLMYKFTKPIKSSLLKTIKIDENRYLDISLDIKKDSDENFSEESVRFFDSLLNVAKMFFVN
RLRTQEVKNAYATFASKLSILAESHDENSKKHIYRVSELSAFFAEKLGFPKEHVEKIRDFSPLHDVGKLFIPAEILNKPG
KLNEQEWEEVRKHPLYADNLLDDPYFETARKIALYHHEHYDGSGYPFRLRGELIPIEAQIVGLVDVYDALRSKRSYKAAF
SHREAIDILLNGDHRTKPDHFNPRLLEILKKYEKEIEEMYKKYEE
>Mature_685_residues
MDNNALDFVLSNYDSLFLETPIVYAGINYYQEYDLSELEFVSGVVEIHDIKETLELALNLHPATENVYVIVDNQTKTGEL
FKQEVENDVVPNFENTNFIFLSDSLDQIKQELDAPLQNSIVLLLAFSKDIYGNFYDYTQVEQYMGQFDKLPIYTTSSVYM
GNNVVGGKITSAYDQGRKAGEIAINLLSGVDITELPRTYFPDNKYVFNFPALERFGISINRLPADSIIQNKPPSFYENYP
VIFWIIMILVPFSIVFIYVLREENLKLHSLLSELNDAKEEAQSYNEELTAANEQLTSYNEELIAQNEEIESNYQEIEQLN
NKIIHLLEIISEVENEEVKEEDFFQKFLNTLIIEIPEADYGSVSIIEGDSWRFLVTLGHDINGLKSLNLKKSYAFIAEKS
MVLDNVISLDEEKMPKDVANLMYKFTKPIKSSLLKTIKIDENRYLDISLDIKKDSDENFSEESVRFFDSLLNVAKMFFVN
RLRTQEVKNAYATFASKLSILAESHDENSKKHIYRVSELSAFFAEKLGFPKEHVEKIRDFSPLHDVGKLFIPAEILNKPG
KLNEQEWEEVRKHPLYADNLLDDPYFETARKIALYHHEHYDGSGYPFRLRGELIPIEAQIVGLVDVYDALRSKRSYKAAF
SHREAIDILLNGDHRTKPDHFNPRLLEILKKYEKEIEEMYKKYEE

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 79392; Mature: 79392

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNALDFVLSNYDSLFLETPIVYAGINYYQEYDLSELEFVSGVVEIHDIKETLELALNL
CCCCHHHHHHHCCCHHHHCCCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
HPATENVYVIVDNQTKTGELFKQEVENDVVPNFENTNFIFLSDSLDQIKQELDAPLQNSI
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCHHCCE
VLLLAFSKDIYGNFYDYTQVEQYMGQFDKLPIYTTSSVYMGNNVVGGKITSAYDQGRKAG
EEEEEECHHHCCCCCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCHHHHHCCCCHH
EIAINLLSGVDITELPRTYFPDNKYVFNFPALERFGISINRLPADSIIQNKPPSFYENYP
HHHHHHHCCCCHHHCCHHHCCCCCEEEECCCHHHHCCEEECCCCHHHHCCCCCCHHCCCH
VIFWIIMILVPFSIVFIYVLREENLKLHSLLSELNDAKEEAQSYNEELTAANEQLTSYNE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELIAQNEEIESNYQEIEQLNNKIIHLLEIISEVENEEVKEEDFFQKFLNTLIIEIPEADY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCC
GSVSIIEGDSWRFLVTLGHDINGLKSLNLKKSYAFIAEKSMVLDNVISLDEEKMPKDVAN
CCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHH
LMYKFTKPIKSSLLKTIKIDENRYLDISLDIKKDSDENFSEESVRFFDSLLNVAKMFFVN
HHHHHHHHHHHHHHHHEEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RLRTQEVKNAYATFASKLSILAESHDENSKKHIYRVSELSAFFAEKLGFPKEHVEKIRDF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SPLHDVGKLFIPAEILNKPGKLNEQEWEEVRKHPLYADNLLDDPYFETARKIALYHHEHY
CCHHHHHHHEECHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHEECCC
DGSGYPFRLRGELIPIEAQIVGLVDVYDALRSKRSYKAAFSHREAIDILLNGDHRTKPDH
CCCCCCEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCC
FNPRLLEILKKYEKEIEEMYKKYEE
CCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNNALDFVLSNYDSLFLETPIVYAGINYYQEYDLSELEFVSGVVEIHDIKETLELALNL
CCCCHHHHHHHCCCHHHHCCCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
HPATENVYVIVDNQTKTGELFKQEVENDVVPNFENTNFIFLSDSLDQIKQELDAPLQNSI
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCCCHHCCE
VLLLAFSKDIYGNFYDYTQVEQYMGQFDKLPIYTTSSVYMGNNVVGGKITSAYDQGRKAG
EEEEEECHHHCCCCCCHHHHHHHHHHHHCCCEEEECCEEECCCCCCCCCHHHHHCCCCHH
EIAINLLSGVDITELPRTYFPDNKYVFNFPALERFGISINRLPADSIIQNKPPSFYENYP
HHHHHHHCCCCHHHCCHHHCCCCCEEEECCCHHHHCCEEECCCCHHHHCCCCCCHHCCCH
VIFWIIMILVPFSIVFIYVLREENLKLHSLLSELNDAKEEAQSYNEELTAANEQLTSYNE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELIAQNEEIESNYQEIEQLNNKIIHLLEIISEVENEEVKEEDFFQKFLNTLIIEIPEADY
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCC
GSVSIIEGDSWRFLVTLGHDINGLKSLNLKKSYAFIAEKSMVLDNVISLDEEKMPKDVAN
CCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHH
LMYKFTKPIKSSLLKTIKIDENRYLDISLDIKKDSDENFSEESVRFFDSLLNVAKMFFVN
HHHHHHHHHHHHHHHHEEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RLRTQEVKNAYATFASKLSILAESHDENSKKHIYRVSELSAFFAEKLGFPKEHVEKIRDF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SPLHDVGKLFIPAEILNKPGKLNEQEWEEVRKHPLYADNLLDDPYFETARKIALYHHEHY
CCHHHHHHHEECHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHEECCC
DGSGYPFRLRGELIPIEAQIVGLVDVYDALRSKRSYKAAFSHREAIDILLNGDHRTKPDH
CCCCCCEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCC
FNPRLLEILKKYEKEIEEMYKKYEE
CCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]