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The map label for this gene is lspA [H]

Identifier: 160902201

GI number: 160902201

Start: 788112

End: 788561

Strand: Direct

Name: lspA [H]

Synonym: Pmob_0735

Alternate gene names: 160902201

Gene position: 788112-788561 (Clockwise)

Preceding gene: 160902198

Following gene: 160902202

Centisome position: 36.33

GC content: 28.22

Gene sequence:

>450_bases
ATGAATTGGGTTATACCTATCATTATCTTTTTTGACCAACTAACTAAAAAACTTTCTGAAACGTTTCTTTTAGAAAAAAA
TATTAAAATCGGATTTTTCCAGTTGACTTATGTTGAAAACACAGGCATCGCTTTTGGACTTTTTAAAGATATGGCTTTGT
TTCATGGTATCTTCTCTACACTAATAGTAATTTTTCTTTTTATCTTAAAAGAAAAATACAAAGAAAAATATAAGTTTTTT
ACTACGTCTTTTGACTTAGGTATAGCTTTTATTATAGGAGGGGCTTTAGGTAATATCATTGATAGAATCAGGTTAGGATA
CGTTGTAGATATGATATATTGGCCAAACTTTTCTATATTCAACGTAGCTGATATATTCGTGACTTTTGGTGGTGTGATTT
TATTATACCATTTTTTCAAAAGGAGCAAATATGGAGAAAAGAATGTATAA

Upstream 100 bases:

>100_bases
TCCGGTTGATAAGATTTTTAACGGTAAAGTGACAATTTTTACCTCTAAAGTGTTATAATCAATATCAGCTATAATAAAGT
GAAAAGGAAGGATTGAACAA

Downstream 100 bases:

>100_bases
AGTTGAAAGGGAAGATGAACAAAAAAGGCTTGATATATACATTGCCCAAAAAATGCCCATTGAAATTTCTAGAAATCTCA
TCCAAAATGCAATAACTAAA

Product: lipoprotein signal peptidase

Products: NA

Alternate protein names: Prolipoprotein signal peptidase; Signal peptidase II; SPase II [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNWVIPIIIFFDQLTKKLSETFLLEKNIKIGFFQLTYVENTGIAFGLFKDMALFHGIFSTLIVIFLFILKEKYKEKYKFF
TTSFDLGIAFIIGGALGNIIDRIRLGYVVDMIYWPNFSIFNVADIFVTFGGVILLYHFFKRSKYGEKNV

Sequences:

>Translated_149_residues
MNWVIPIIIFFDQLTKKLSETFLLEKNIKIGFFQLTYVENTGIAFGLFKDMALFHGIFSTLIVIFLFILKEKYKEKYKFF
TTSFDLGIAFIIGGALGNIIDRIRLGYVVDMIYWPNFSIFNVADIFVTFGGVILLYHFFKRSKYGEKNV
>Mature_149_residues
MNWVIPIIIFFDQLTKKLSETFLLEKNIKIGFFQLTYVENTGIAFGLFKDMALFHGIFSTLIVIFLFILKEKYKEKYKFF
TTSFDLGIAFIIGGALGNIIDRIRLGYVVDMIYWPNFSIFNVADIFVTFGGVILLYHFFKRSKYGEKNV

Specific function: This protein specifically catalyzes the removal of signal peptides from prolipoproteins [H]

COG id: COG0597

COG function: function code MU; Lipoprotein signal peptidase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001872 [H]

Pfam domain/function: PF01252 Peptidase_A8 [H]

EC number: =3.4.23.36 [H]

Molecular weight: Translated: 17391; Mature: 17391

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00855 SPASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWVIPIIIFFDQLTKKLSETFLLEKNIKIGFFQLTYVENTGIAFGLFKDMALFHGIFST
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
LIVIFLFILKEKYKEKYKFFTTSFDLGIAFIIGGALGNIIDRIRLGYVVDMIYWPNFSIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
NVADIFVTFGGVILLYHFFKRSKYGEKNV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNWVIPIIIFFDQLTKKLSETFLLEKNIKIGFFQLTYVENTGIAFGLFKDMALFHGIFST
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
LIVIFLFILKEKYKEKYKFFTTSFDLGIAFIIGGALGNIIDRIRLGYVVDMIYWPNFSIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
NVADIFVTFGGVILLYHFFKRSKYGEKNV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA