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The map label for this gene is 160901805

Identifier: 160901805

GI number: 160901805

Start: 345742

End: 345972

Strand: Direct

Name: 160901805

Synonym: Pmob_0321

Alternate gene names: NA

Gene position: 345742-345972 (Clockwise)

Preceding gene: 160901804

Following gene: 160901806

Centisome position: 15.94

GC content: 28.14

Gene sequence:

>231_bases
ATGAAAAATCTGCTTTTAGACATTTTGAATAACATCGTTAAACATCCAGATGAAATAAAGATAGTAGAGTCCAACGAGGA
ACAAAACGTAATATTTGAAATATATGCAAATTCTGAAGATGTTGGACAAATAATTGGAAAAGACGGTAGAACTATTAAAT
CCATAAACATTCTTTTAAACGCAGCAAAAAAAGATCCTGATAAGAAATTTATCTTAAAAGTAATTAGGTGA

Upstream 100 bases:

>100_bases
TTATGAAAAGATATGATGAAATAAAATTTCAAGCTAGAAAAGAAAAGGGTGTCAAAGAATCTAATGAAATTGTTGAACCA
GAAGGAGAAGAAGTTAAAGA

Downstream 100 bases:

>100_bases
GTGAATTGAACAGTTTATCCAATCTTTTGGACAACAAAATCTCTGTGGCAAAAATTGTTAATAGCCATGGAGTGCACGGA
GAAGTAAAAATAGTACCTTT

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MKNLLLDILNNIVKHPDEIKIVESNEEQNVIFEIYANSEDVGQIIGKDGRTIKSINILLNAAKKDPDKKFILKVIR

Sequences:

>Translated_76_residues
MKNLLLDILNNIVKHPDEIKIVESNEEQNVIFEIYANSEDVGQIIGKDGRTIKSINILLNAAKKDPDKKFILKVIR
>Mature_76_residues
MKNLLLDILNNIVKHPDEIKIVESNEEQNVIFEIYANSEDVGQIIGKDGRTIKSINILLNAAKKDPDKKFILKVIR

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8672; Mature: 8672

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLLLDILNNIVKHPDEIKIVESNEEQNVIFEIYANSEDVGQIIGKDGRTIKSINILLN
CCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCEEEHHHEEHC
AAKKDPDKKFILKVIR
CCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKNLLLDILNNIVKHPDEIKIVESNEEQNVIFEIYANSEDVGQIIGKDGRTIKSINILLN
CCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHCCCCCEEEHHHEEHC
AAKKDPDKKFILKVIR
CCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]