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The map label for this gene is fliM [H]

Identifier: 160901604

GI number: 160901604

Start: 109902

End: 110981

Strand: Direct

Name: fliM [H]

Synonym: Pmob_0113

Alternate gene names: 160901604

Gene position: 109902-110981 (Clockwise)

Preceding gene: 160901603

Following gene: 160901605

Centisome position: 5.07

GC content: 34.91

Gene sequence:

>1080_bases
ATGCCTGAAGATGAGACCCTTACACAGGAAGAAATAGATAGTATTTTAAAATCAATGAGTTCTGGAGAGAGCCCCGAAGA
AGTTCTTGAAGAGTATCAGGAAGAAGAAAGAAGAATCAAAGATTACGATTTTAGAAGACCCATGAAGTTTTCACGGGAGC
AACTAAGAACTCTCCAGTTAATCCATGAAAGCTTTGCAAGAGAGCTATCTACTTATCTTTCAGGCAGAAGCAGAACATTC
GTCGATGTTAAATATGCTAGTATCGATCAAATCACCTTTTCAGAATTCCAAAAATCATTGAACTCCCCAACATTTATCGT
TATCTTTTCGTCCGAAGCTTTTTCAGGAAGCGCTATTCTACAAATGGGCTTAGATTTAGGATACGTCATAATAGATAGAC
TTTTAGGAGGGCCAGGAAACACTCTTGAAGAGATTAGACCTCCCACCGAGATAGAAATGAACATTTTGAGAAAAGAATCT
GCAGTTATGTTGAGAATGCTATCAAAATCATGGTCGAATATTGAAGAATTTGACGCCAACTTGGAGAATTTAGAAACCAA
TCCCCAATTTGTTCAAGTTGCCCCTCCAAATGAGATGACAATTCTTATAACACTTTCTGTTACTATAAAAAACGTACAAG
GTTTTGTCAATCTTTGTTTTCCATCTTCTTCGTTGGAACCTTTGAACGATAAATTGACAACAAGAATGTGGACAACCTCT
TACAGACATACTGAAGAATTTAAAGAAAATCTAAGACAATCGTTGTTGCTTTCAAAATTAAATTTGTCTGCTATACTTGG
CAAAACAGAGATATATTTAAATGATTTTTTGAATCTTGAAGTCGGGGATGTAATCCGCTTAGATTCTTTTTACGATGAGC
CCATAGATCTAGAAATTGAAGAAAGACCGATATTCAAAGTAAATGTGGGTAAGAGTAAAGGTTTTTACAGTGTAAAGATC
GTTGAGAAAAACAAAGAACTTTTAGAAAGACTTCTTGTTGAAGAGAGTATGAAAAAAAAGACGAAAAAGCTTGATTCTTC
TGAAAAAGATGAAGATACAGAAAAAACAGGAGATGAATAA

Upstream 100 bases:

>100_bases
ATCCCCAAAACCTATTTCAATTAAAAAAACTTTTTGCACAATGCGGCAAACTTAAAAAAGCTTTTTGCACAAGGCTGCAA
AATGAAAAAGAGGTGTTTTT

Downstream 100 bases:

>100_bases
AATGCCTGAAAACGAAGACCGTATTCTAAATCAAAGTGAATTGGATTCATTATTAAAAGGGTTAAATAACACCGATGATC
CAAAGGAAAGCGAAGAAACC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MPEDETLTQEEIDSILKSMSSGESPEEVLEEYQEEERRIKDYDFRRPMKFSREQLRTLQLIHESFARELSTYLSGRSRTF
VDVKYASIDQITFSEFQKSLNSPTFIVIFSSEAFSGSAILQMGLDLGYVIIDRLLGGPGNTLEEIRPPTEIEMNILRKES
AVMLRMLSKSWSNIEEFDANLENLETNPQFVQVAPPNEMTILITLSVTIKNVQGFVNLCFPSSSLEPLNDKLTTRMWTTS
YRHTEEFKENLRQSLLLSKLNLSAILGKTEIYLNDFLNLEVGDVIRLDSFYDEPIDLEIEERPIFKVNVGKSKGFYSVKI
VEKNKELLERLLVEESMKKKTKKLDSSEKDEDTEKTGDE

Sequences:

>Translated_359_residues
MPEDETLTQEEIDSILKSMSSGESPEEVLEEYQEEERRIKDYDFRRPMKFSREQLRTLQLIHESFARELSTYLSGRSRTF
VDVKYASIDQITFSEFQKSLNSPTFIVIFSSEAFSGSAILQMGLDLGYVIIDRLLGGPGNTLEEIRPPTEIEMNILRKES
AVMLRMLSKSWSNIEEFDANLENLETNPQFVQVAPPNEMTILITLSVTIKNVQGFVNLCFPSSSLEPLNDKLTTRMWTTS
YRHTEEFKENLRQSLLLSKLNLSAILGKTEIYLNDFLNLEVGDVIRLDSFYDEPIDLEIEERPIFKVNVGKSKGFYSVKI
VEKNKELLERLLVEESMKKKTKKLDSSEKDEDTEKTGDE
>Mature_358_residues
PEDETLTQEEIDSILKSMSSGESPEEVLEEYQEEERRIKDYDFRRPMKFSREQLRTLQLIHESFARELSTYLSGRSRTFV
DVKYASIDQITFSEFQKSLNSPTFIVIFSSEAFSGSAILQMGLDLGYVIIDRLLGGPGNTLEEIRPPTEIEMNILRKESA
VMLRMLSKSWSNIEEFDANLENLETNPQFVQVAPPNEMTILITLSVTIKNVQGFVNLCFPSSSLEPLNDKLTTRMWTTSY
RHTEEFKENLRQSLLLSKLNLSAILGKTEIYLNDFLNLEVGDVIRLDSFYDEPIDLEIEERPIFKVNVGKSKGFYSVKIV
EKNKELLERLLVEESMKKKTKKLDSSEKDEDTEKTGDE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=323, Percent_Identity=26.3157894736842, Blast_Score=104, Evalue=9e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 41411; Mature: 41279

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDETLTQEEIDSILKSMSSGESPEEVLEEYQEEERRIKDYDFRRPMKFSREQLRTLQL
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IHESFARELSTYLSGRSRTFVDVKYASIDQITFSEFQKSLNSPTFIVIFSSEAFSGSAIL
HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
QMGLDLGYVIIDRLLGGPGNTLEEIRPPTEIEMNILRKESAVMLRMLSKSWSNIEEFDAN
HHHCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
LENLETNPQFVQVAPPNEMTILITLSVTIKNVQGFVNLCFPSSSLEPLNDKLTTRMWTTS
HHCCCCCCCEEEECCCCCEEEEEEEEEEEEHHHHHEEEECCCCCCCCCHHHHHHHHHHCC
YRHTEEFKENLRQSLLLSKLNLSAILGKTEIYLNDFLNLEVGDVIRLDSFYDEPIDLEIE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCEEEECCCCCCCCCEEEC
ERPIFKVNVGKSKGFYSVKIVEKNKELLERLLVEESMKKKTKKLDSSEKDEDTEKTGDE
CCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PEDETLTQEEIDSILKSMSSGESPEEVLEEYQEEERRIKDYDFRRPMKFSREQLRTLQL
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IHESFARELSTYLSGRSRTFVDVKYASIDQITFSEFQKSLNSPTFIVIFSSEAFSGSAIL
HHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
QMGLDLGYVIIDRLLGGPGNTLEEIRPPTEIEMNILRKESAVMLRMLSKSWSNIEEFDAN
HHHCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
LENLETNPQFVQVAPPNEMTILITLSVTIKNVQGFVNLCFPSSSLEPLNDKLTTRMWTTS
HHCCCCCCCEEEECCCCCEEEEEEEEEEEEHHHHHEEEECCCCCCCCCHHHHHHHHHHCC
YRHTEEFKENLRQSLLLSKLNLSAILGKTEIYLNDFLNLEVGDVIRLDSFYDEPIDLEIE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCEEEECCCCCCCCCEEEC
ERPIFKVNVGKSKGFYSVKIVEKNKELLERLLVEESMKKKTKKLDSSEKDEDTEKTGDE
CCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]