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The map label for this gene is opsX [H]

Identifier: 160877577

GI number: 160877577

Start: 5287906

End: 5288949

Strand: Reverse

Name: opsX [H]

Synonym: Sbal195_4476

Alternate gene names: 160877577

Gene position: 5288949-5287906 (Counterclockwise)

Preceding gene: 160877579

Following gene: 160877576

Centisome position: 98.91

GC content: 47.8

Gene sequence:

>1044_bases
ATGAGTTTAAATCCCAATACCATGAATTCCCTTTGTTTGCTGCGCTTATCCGCTATCGGTGACGTCTGTCATGCCGTGGC
AATGGTGCAGGCGATTCAGCGGCAATACCCCGAGCTCAAAATCACATGGGTGATCGGTAAACTCGAATATCAATTGTTGA
AGCATTTACCTGGCATTGAGTTTGTTATTTTTGATAAATCTCAAGGATGGCGTAGTTATTTTAATTTACGTAAGGCATTA
AAAGGCCGACGTTTTGACGTGCTGCTGCATATGCAGGTTGCGCTACGTGCAACTTTGGCTTCATTGGCTATTTCGGCAAA
AGTACGCATTGGTTTCGATCGTGCCCGCGCTAAAGAAGGCCAATGGCTAGTGACGAATCGTAGAGTTGAGCCCTTGGCCA
AGCCCCATGTGCTAGAAGGATTTATGGGCTTCGCTAAGGCGATTGGCGTTAACGATCTTACTCCCCAGTGGCATATTCCT
GTGCCAATTGCGGATACTGAATTTGCTCAGACACAGATTAAAGACAATGAAAAAGTCTTTATCATCTGCGCCGCAGCCAG
TAAGGCTGAACGTAACTGGTTGCCCGAGCGTTATGCCGCCGTCGCGAGCCATGCGATTGCGAAAGGATTTAGAGTCATGC
TGTGCGGTGGCCCAACTCAACTTGAGAAGGATTTAGCAGAGCAAATCTTGCAGGCTTGTCCCTCTAAAATCGATAATTTA
GTGGACAAAACCAGTCTGGCTCAACTATTAGCCCTGCTAAAACGCGCCAGTTTAGTGTTAGCGCCTGATACGGGCCCTGC
GCATATGGCGGTGACCCAAGACACGCCAGTCATTGGTTTATATGCCCATTCAAATCCTGGGCGCACAGGTCCTTATCTAT
CGCAGCAATATGTGGTGAGCGCCTATGATGAGGCGATAGCATCCCAACATAGAGGTGAAGTTAAGTGGGGTACTCGCGCC
AAAGGCGAGCATTTGATGGCGTTGATCAGTGTTGAAGCCGTGATTGAAAAGTTTGAGTTAGTGGTTCAGCAGACACTCAG
TTAA

Upstream 100 bases:

>100_bases
ATGGGAGATTTGTTGACTTAAGCGTGGCACCTAGGGCCATTCTACATTAAGATCCTTAGCTTGCGCCAAATAACCTTAAG
AGCTTTTAGCTTCAATCCCA

Downstream 100 bases:

>100_bases
AGCTTGTTAGTATCGTGCATTCTTGTTCAGCACTCTTGAAATATCGCTGCATTAGCGGTGGGTATTCAGAATATCGTTTA
GGAGATAAATCATGCGGATA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSLNPNTMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELKITWVIGKLEYQLLKHLPGIEFVIFDKSQGWRSYFNLRKAL
KGRRFDVLLHMQVALRATLASLAISAKVRIGFDRARAKEGQWLVTNRRVEPLAKPHVLEGFMGFAKAIGVNDLTPQWHIP
VPIADTEFAQTQIKDNEKVFIICAAASKAERNWLPERYAAVASHAIAKGFRVMLCGGPTQLEKDLAEQILQACPSKIDNL
VDKTSLAQLLALLKRASLVLAPDTGPAHMAVTQDTPVIGLYAHSNPGRTGPYLSQQYVVSAYDEAIASQHRGEVKWGTRA
KGEHLMALISVEAVIEKFELVVQQTLS

Sequences:

>Translated_347_residues
MSLNPNTMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELKITWVIGKLEYQLLKHLPGIEFVIFDKSQGWRSYFNLRKAL
KGRRFDVLLHMQVALRATLASLAISAKVRIGFDRARAKEGQWLVTNRRVEPLAKPHVLEGFMGFAKAIGVNDLTPQWHIP
VPIADTEFAQTQIKDNEKVFIICAAASKAERNWLPERYAAVASHAIAKGFRVMLCGGPTQLEKDLAEQILQACPSKIDNL
VDKTSLAQLLALLKRASLVLAPDTGPAHMAVTQDTPVIGLYAHSNPGRTGPYLSQQYVVSAYDEAIASQHRGEVKWGTRA
KGEHLMALISVEAVIEKFELVVQQTLS
>Mature_346_residues
SLNPNTMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELKITWVIGKLEYQLLKHLPGIEFVIFDKSQGWRSYFNLRKALK
GRRFDVLLHMQVALRATLASLAISAKVRIGFDRARAKEGQWLVTNRRVEPLAKPHVLEGFMGFAKAIGVNDLTPQWHIPV
PIADTEFAQTQIKDNEKVFIICAAASKAERNWLPERYAAVASHAIAKGFRVMLCGGPTQLEKDLAEQILQACPSKIDNLV
DKTSLAQLLALLKRASLVLAPDTGPAHMAVTQDTPVIGLYAHSNPGRTGPYLSQQYVVSAYDEAIASQHRGEVKWGTRAK
GEHLMALISVEAVIEKFELVVQQTLS

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=280, Percent_Identity=21.4285714285714, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790051, Length=311, Percent_Identity=24.7588424437299, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38452; Mature: 38321

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNPNTMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELKITWVIGKLEYQLLKHLPGIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCE
FVIFDKSQGWRSYFNLRKALKGRRFDVLLHMQVALRATLASLAISAKVRIGFDRARAKEG
EEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHEEEEECCHHHHCCCC
QWLVTNRRVEPLAKPHVLEGFMGFAKAIGVNDLTPQWHIPVPIADTEFAQTQIKDNEKVF
CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHCCCCCEEE
IICAAASKAERNWLPERYAAVASHAIAKGFRVMLCGGPTQLEKDLAEQILQACPSKIDNL
EEEECCCCHHHCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHH
VDKTSLAQLLALLKRASLVLAPDTGPAHMAVTQDTPVIGLYAHSNPGRTGPYLSQQYVVS
HHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHH
AYDEAIASQHRGEVKWGTRAKGEHLMALISVEAVIEKFELVVQQTLS
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLNPNTMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELKITWVIGKLEYQLLKHLPGIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCCCE
FVIFDKSQGWRSYFNLRKALKGRRFDVLLHMQVALRATLASLAISAKVRIGFDRARAKEG
EEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHEEEEECCHHHHCCCC
QWLVTNRRVEPLAKPHVLEGFMGFAKAIGVNDLTPQWHIPVPIADTEFAQTQIKDNEKVF
CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHCCCCCEEE
IICAAASKAERNWLPERYAAVASHAIAKGFRVMLCGGPTQLEKDLAEQILQACPSKIDNL
EEEECCCCHHHCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCHHHHHHH
VDKTSLAQLLALLKRASLVLAPDTGPAHMAVTQDTPVIGLYAHSNPGRTGPYLSQQYVVS
HHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHH
AYDEAIASQHRGEVKWGTRAKGEHLMALISVEAVIEKFELVVQQTLS
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]