Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877575
Identifier: 160877575
GI number: 160877575
Start: 5285624
End: 5286700
Strand: Reverse
Name: 160877575
Synonym: Sbal195_4474
Alternate gene names: NA
Gene position: 5286700-5285624 (Counterclockwise)
Preceding gene: 160877576
Following gene: 160877572
Centisome position: 98.87
GC content: 43.45
Gene sequence:
>1077_bases GTGGAAGAAGTCAAACAAGCCAAAAGACGTTACTTATTTTACATAGCGCAAAACTATTCCTATGCGATGTTAAGGCCGCT TCAACAAGTCATTTGGGCTAGAGGCGATGAGGTTTGCTGGTTTTTAGAGGGAAATGAAGTCGACGCTAAGTTTCTAAAGG CTGATGAGTCGCGTTTGTTGAGCATTGATGCCGTTAAGGCGTGGAAACCCGATGCGGTATTTGTTCCTGGGAATGTTGTC CCTCGCTTTATTCCAGGGGTTAAAGTCGGGGTATTTCATGGCTTTAATGCAGGTAAAATGAATCATAAGGGCCGTGAAGA TCACTTCGAAATCCGTGATTGTTTTGACTTGTATTGTACCCAAGGCCCAGCGACAACTTTGCCTTTCCTTAAGCTCGAGA AAAAGTTTGGTACTTTTACAGTGGCTGAGACGGGTTGGCCTGCACTCGATCCCTTATTTCTTGAAAATAAAGATAATCCC TATATCAAAGCGGATGACCTGAGGCCAGTAGTACTCTTTTGCTCAACATTTTCCCCCAGTTTGACCTGTGCACCTGTGGT ATTTGAGCAGATTAAAGCCCTGGCGCAAAAGAGCCAATGGCGCTGGTTAGTGCAATTTCATCCTAAGATGAACCCTAAGA TTGTTGAGCAGTACAGGGCTTTAGAAAACGAGAATTTACAGTTTATTGAAACTGACAATGTGATCCCTTTGCTGCAGGCG GGTGATGTAATGTTGTGTGACACCTCATCGATTCTGCTGATGTTTTTAATGCAGCGAAAACCCGTGGTGACCTTTAAAAA TCAGTCACCTAAAGATCATTTAATCGATATCAGTCAAGTTGAGGATATTGAATCTGCATTAACGCGAGCACTGAGTCGTC CAGATGATTTGATGGCGCATATCCATGATTATTGTAATCAAATTCACCCCACGGGGGATGGCCAATCTAGCCAGCGAGTT TTAGCCGCAACAGATGCTTTGATTGATAAAGGCACCGATTGGCTTAAGCCTAAACCATTAAACTTGCTGCGCCATTTTAA AATGCGTCGCAAGCTAGGTTATTGGAAGTTGTTTTAG
Upstream 100 bases:
>100_bases GAACAGGTGGATATTTTGGCCAAAGTGGATGCCACCTTAATTGCTGAACAATATTTAGCGTTGGCCAAATAATTTAACAA TTTATTTTAGGAGGATGCGG
Downstream 100 bases:
>100_bases CTAGCTGTTGTTACTTATGGGCCGATATTTTAATATCGGCCCATTTTGTTAGCCTTGTAGTTTCGTTTCTTCCACCAGTT TAAAGATGATTTCTTGCATA
Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MEEVKQAKRRYLFYIAQNYSYAMLRPLQQVIWARGDEVCWFLEGNEVDAKFLKADESRLLSIDAVKAWKPDAVFVPGNVV PRFIPGVKVGVFHGFNAGKMNHKGREDHFEIRDCFDLYCTQGPATTLPFLKLEKKFGTFTVAETGWPALDPLFLENKDNP YIKADDLRPVVLFCSTFSPSLTCAPVVFEQIKALAQKSQWRWLVQFHPKMNPKIVEQYRALENENLQFIETDNVIPLLQA GDVMLCDTSSILLMFLMQRKPVVTFKNQSPKDHLIDISQVEDIESALTRALSRPDDLMAHIHDYCNQIHPTGDGQSSQRV LAATDALIDKGTDWLKPKPLNLLRHFKMRRKLGYWKLF
Sequences:
>Translated_358_residues MEEVKQAKRRYLFYIAQNYSYAMLRPLQQVIWARGDEVCWFLEGNEVDAKFLKADESRLLSIDAVKAWKPDAVFVPGNVV PRFIPGVKVGVFHGFNAGKMNHKGREDHFEIRDCFDLYCTQGPATTLPFLKLEKKFGTFTVAETGWPALDPLFLENKDNP YIKADDLRPVVLFCSTFSPSLTCAPVVFEQIKALAQKSQWRWLVQFHPKMNPKIVEQYRALENENLQFIETDNVIPLLQA GDVMLCDTSSILLMFLMQRKPVVTFKNQSPKDHLIDISQVEDIESALTRALSRPDDLMAHIHDYCNQIHPTGDGQSSQRV LAATDALIDKGTDWLKPKPLNLLRHFKMRRKLGYWKLF >Mature_358_residues MEEVKQAKRRYLFYIAQNYSYAMLRPLQQVIWARGDEVCWFLEGNEVDAKFLKADESRLLSIDAVKAWKPDAVFVPGNVV PRFIPGVKVGVFHGFNAGKMNHKGREDHFEIRDCFDLYCTQGPATTLPFLKLEKKFGTFTVAETGWPALDPLFLENKDNP YIKADDLRPVVLFCSTFSPSLTCAPVVFEQIKALAQKSQWRWLVQFHPKMNPKIVEQYRALENENLQFIETDNVIPLLQA GDVMLCDTSSILLMFLMQRKPVVTFKNQSPKDHLIDISQVEDIESALTRALSRPDDLMAHIHDYCNQIHPTGDGQSSQRV LAATDALIDKGTDWLKPKPLNLLRHFKMRRKLGYWKLF
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41193; Mature: 41193
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEVKQAKRRYLFYIAQNYSYAMLRPLQQVIWARGDEVCWFLEGNEVDAKFLKADESRLL CCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCEE SIDAVKAWKPDAVFVPGNVVPRFIPGVKVGVFHGFNAGKMNHKGREDHFEIRDCFDLYCT EEEEHHCCCCCEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC QGPATTLPFLKLEKKFGTFTVAETGWPALDPLFLENKDNPYIKADDLRPVVLFCSTFSPS CCCCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCC LTCAPVVFEQIKALAQKSQWRWLVQFHPKMNPKIVEQYRALENENLQFIETDNVIPLLQA CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECC GDVMLCDTSSILLMFLMQRKPVVTFKNQSPKDHLIDISQVEDIESALTRALSRPDDLMAH CCEEEECCHHHHHHHHHHCCCEEEECCCCCHHHCEEHHHHHHHHHHHHHHHCCCHHHHHH IHDYCNQIHPTGDGQSSQRVLAATDALIDKGTDWLKPKPLNLLRHFKMRRKLGYWKLF HHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEEVKQAKRRYLFYIAQNYSYAMLRPLQQVIWARGDEVCWFLEGNEVDAKFLKADESRLL CCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCEE SIDAVKAWKPDAVFVPGNVVPRFIPGVKVGVFHGFNAGKMNHKGREDHFEIRDCFDLYCT EEEEHHCCCCCEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC QGPATTLPFLKLEKKFGTFTVAETGWPALDPLFLENKDNPYIKADDLRPVVLFCSTFSPS CCCCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCC LTCAPVVFEQIKALAQKSQWRWLVQFHPKMNPKIVEQYRALENENLQFIETDNVIPLLQA CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECC GDVMLCDTSSILLMFLMQRKPVVTFKNQSPKDHLIDISQVEDIESALTRALSRPDDLMAH CCEEEECCHHHHHHHHHHCCCEEEECCCCCHHHCEEHHHHHHHHHHHHHHHCCCHHHHHH IHDYCNQIHPTGDGQSSQRVLAATDALIDKGTDWLKPKPLNLLRHFKMRRKLGYWKLF HHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA