Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877505
Identifier: 160877505
GI number: 160877505
Start: 5201979
End: 5202395
Strand: Reverse
Name: 160877505
Synonym: Sbal195_4404
Alternate gene names: NA
Gene position: 5202395-5201979 (Counterclockwise)
Preceding gene: 160877506
Following gene: 160877504
Centisome position: 97.29
GC content: 29.5
Gene sequence:
>417_bases ATGAAAGCATTAAAATTATCTACTTTATTGTTACTAATACTTGCTGTATTTATTTTTTATTATTACGGCGAGGAGTCTAT TAAAGGAGGTCAGAAATATGGACTATCTATTGGAGATGATAAGAGTAAGGTTTATAATAATCTAGGTAAATTCTTTTCCG AAATCAAAAGTTCAGGCGACAAAGTTTTTATCCTTGTCAAGGTTTCAGAAAGTGCTTCTAAACTTCTTGTTACAGATAAA GGATTCGATGTTTTTATTGAGCCATATTTTCATAAAAACTCTGGTGAAGAGTTTAAAAAAAGTGATAGATGGGTTTTTTA TTTAAATGCTAGTTCTATGGATATTGTCGAATTAAGGTTTGATAATGAAAAATTAACTGAGATATACAGAAATAGAAGAT TCGTCGAGCTACCGTAA
Upstream 100 bases:
>100_bases CGTTGGTAATTCACCTCCGGTTTTTCGGGTATCAGGTAGACTTGATTCACGTAAACTCGATGAAGAGTTAAATTAAATAT GAGCTGTAGGAAACTTCACT
Downstream 100 bases:
>100_bases AATACAGGAAAATAGCAGGTACAGGTATATCTTTTTGTTTTTCAGACTCTTCAACTAGGCTTTAAATCACTCTGATTTTG TCTGTGTGGAGTTTGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKALKLSTLLLLILAVFIFYYYGEESIKGGQKYGLSIGDDKSKVYNNLGKFFSEIKSSGDKVFILVKVSESASKLLVTDK GFDVFIEPYFHKNSGEEFKKSDRWVFYLNASSMDIVELRFDNEKLTEIYRNRRFVELP
Sequences:
>Translated_138_residues MKALKLSTLLLLILAVFIFYYYGEESIKGGQKYGLSIGDDKSKVYNNLGKFFSEIKSSGDKVFILVKVSESASKLLVTDK GFDVFIEPYFHKNSGEEFKKSDRWVFYLNASSMDIVELRFDNEKLTEIYRNRRFVELP >Mature_138_residues MKALKLSTLLLLILAVFIFYYYGEESIKGGQKYGLSIGDDKSKVYNNLGKFFSEIKSSGDKVFILVKVSESASKLLVTDK GFDVFIEPYFHKNSGEEFKKSDRWVFYLNASSMDIVELRFDNEKLTEIYRNRRFVELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15996; Mature: 15996
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALKLSTLLLLILAVFIFYYYGEESIKGGQKYGLSIGDDKSKVYNNLGKFFSEIKSSGD CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCC KVFILVKVSESASKLLVTDKGFDVFIEPYFHKNSGEEFKKSDRWVFYLNASSMDIVELRF EEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCHHHCCCCEEEEEECCCCEEEEEEE DNEKLTEIYRNRRFVELP CCHHHHHHHHCCEEEECC >Mature Secondary Structure MKALKLSTLLLLILAVFIFYYYGEESIKGGQKYGLSIGDDKSKVYNNLGKFFSEIKSSGD CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCC KVFILVKVSESASKLLVTDKGFDVFIEPYFHKNSGEEFKKSDRWVFYLNASSMDIVELRF EEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCHHHCCCCEEEEEECCCCEEEEEEE DNEKLTEIYRNRRFVELP CCHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA