| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160877502
Identifier: 160877502
GI number: 160877502
Start: 5198075
End: 5200126
Strand: Direct
Name: 160877502
Synonym: Sbal195_4400
Alternate gene names: NA
Gene position: 5198075-5200126 (Clockwise)
Preceding gene: 160877501
Following gene: 160877503
Centisome position: 97.21
GC content: 35.92
Gene sequence:
>2052_bases ATGCATAATCAAAATCTATATCCCGATGATTTCCCAGAAAAATACAAATTTGAGAACATTGATTTAATTGAACTTTTCCA TCAAAAAAAATGGGATAAACTCAATAATATTGTTATTTGTCGTGATAAAACGGGAAAGGTCACTGCGCGTTTTAGTGACA GCGAATGGGATCTAACCCCATATGATAGAAACCATAACGGGAAAAATAGTTTTAATTTTAAAGGATTGGATAACGAACTT GAATTACAAATTGAGTTTAAGCTCATAGCGTATGGTTTGCTTTTCCATAAAAGTAGGAGAGGTCCGGCACCTAAGTTCTC AACTGTAGTGAGTAATATTTCACGACTAAAAACAGTTTATACATATCTAAAAATAGCAAAACAAAAATCAATCAGCCACT TATCAAATAAAAGGTCATTTGAAGCATTTAAATCATTTTTATTAACAAAAAACTCAAGTCAAAGAAATTTGCAAAACTTA TTCATTGCATTAAATAACGTAATAAGACTTGAACCTTGGCTAAAATATCCATTAGGCTTTAGCGAAAAACTATCTGTAAT CGCTTTATCTAAGAGTTTGAGCAATAGAGAGCTTCAGCAAACACTGGCCATCCCTGAACAATTAAGTAATGCTATCTATG GAAAAGCTATTGAGTTAATCCAAAACGCACTACCACATAAAGATATAATTAGTAACACAGAGAACCTACTGCAAACTAAC TATCTGAATGGCAAAAAGATTATAGATGAAAAAATAAAATATGGAGCTAGATTTACCTGGACTGACGCTAACGGCAATAT AATTAATAGCCAGAAATATGCAAATATCATTGCCTACTATCAACCTTTACGGACTAAAGAAATTATTTCCCCACTGTCTA ATCAAATAAATGGCATACAAATTAATAGTGGTATTGAGTTTCGTGCTTATATTGGACAATTAATTACCGCATGCTTCATT ATTTGTGGTGGATTTTCAGGTATGCGCGAATCTGAACTAGATAAACTTACACCTAACAGTTACTACATAGACAACGTTGA TGGACGTGACTTCCATATGCTTCAGTCAAGTACTTTTAAACTAGGTGAAAAGCGAGAAACATGGATAACGGCCCCAATTA CAAAACAAGCAATCGAACTAGTATCAACATTGACAAGGACATGGAGATCTCAAATAGAATATCCGGACAGTCGTTATATA AATACCCTCTGGTGCATTCAAAAAGCTCGTTCAATACCACCAGTTCTGATCAAAAAATGGGGATTGAGATTACGCATTTT CTGCATAAAATTCAATTTCTTGGTAACAAGAGAAGATTATCAAGAGTGTATTGAATCGAATCCTAGTTCACTAGTTAAAA TTAAAGAAATCGTGACCATTGGTCAACCTTGGCCTCTAGCTCCTCACCAACTTCGGCGTTCGCTAGCATTTTACGCTACC AAACACAGGCTAGCCACAAAAGTAGCTTTAAAACAGCAGTTTAAGCATTTATATCTAGCAATGGCAGAGTGGTATTCCAA CGGAGGACAATTAGCCAGCATGAGAAATTTAACCGTTGATAATGAGATACAACAAGCTCTGAATGCGGTTAATGCGGAAA TGACAGCAAGCAAAATCTTTAAGCAATGGCATTCAAATGAGCCACTTTCAGGGTCTCATGGCAAAGCCATTGTAAAAATG AGAGGAGATATTCCACACATATACAGCACATGGGACACCATATATCGAGCAGTACTGAAAGGTACACTAACACTTCACGG TACAGCGCATAGTTACTGTAAAAACGGTTACGATTGTGATATGGATGGCATTGTAATGCCCCAATTCTGTGTTGATTGTG CTGGTCATGGGAGCATCATCGACAAAGATCAGGCCTTGTGGTGGCAGAAAAAGCACCTAAGCTTAGTTACTTACATGGAA TTTGGTGAAGATATATCTGTAAGCGAACGTAGTCACTTCATTACTCAAATCAGAGCAGCAGAAAACGTCATGAAAGACTT TGATATGCCTTTTATACCTTTTGAACCGGAATTAAAGGTAACTGAATTATGA
Upstream 100 bases:
>100_bases TTAATTGATGACAATGGGCTACATCCTCTATGGCAGGATACTAACATTATCCTACCAATGATACCAACTATACCGATGTG GTCGGTTACGGAGTAGGAAA
Downstream 100 bases:
>100_bases GTAAAAGCGAAAATACATTATTGATGTTAGAGGCAGCACTAGATCGTATTTCACAGGGGAAACCCAAGCGCATTCCAGCT ACACGAAAGCTAAGTGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase; Site-Specific Recombinase Phage Integrase Family Protein
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MHNQNLYPDDFPEKYKFENIDLIELFHQKKWDKLNNIVICRDKTGKVTARFSDSEWDLTPYDRNHNGKNSFNFKGLDNEL ELQIEFKLIAYGLLFHKSRRGPAPKFSTVVSNISRLKTVYTYLKIAKQKSISHLSNKRSFEAFKSFLLTKNSSQRNLQNL FIALNNVIRLEPWLKYPLGFSEKLSVIALSKSLSNRELQQTLAIPEQLSNAIYGKAIELIQNALPHKDIISNTENLLQTN YLNGKKIIDEKIKYGARFTWTDANGNIINSQKYANIIAYYQPLRTKEIISPLSNQINGIQINSGIEFRAYIGQLITACFI ICGGFSGMRESELDKLTPNSYYIDNVDGRDFHMLQSSTFKLGEKRETWITAPITKQAIELVSTLTRTWRSQIEYPDSRYI NTLWCIQKARSIPPVLIKKWGLRLRIFCIKFNFLVTREDYQECIESNPSSLVKIKEIVTIGQPWPLAPHQLRRSLAFYAT KHRLATKVALKQQFKHLYLAMAEWYSNGGQLASMRNLTVDNEIQQALNAVNAEMTASKIFKQWHSNEPLSGSHGKAIVKM RGDIPHIYSTWDTIYRAVLKGTLTLHGTAHSYCKNGYDCDMDGIVMPQFCVDCAGHGSIIDKDQALWWQKKHLSLVTYME FGEDISVSERSHFITQIRAAENVMKDFDMPFIPFEPELKVTEL
Sequences:
>Translated_683_residues MHNQNLYPDDFPEKYKFENIDLIELFHQKKWDKLNNIVICRDKTGKVTARFSDSEWDLTPYDRNHNGKNSFNFKGLDNEL ELQIEFKLIAYGLLFHKSRRGPAPKFSTVVSNISRLKTVYTYLKIAKQKSISHLSNKRSFEAFKSFLLTKNSSQRNLQNL FIALNNVIRLEPWLKYPLGFSEKLSVIALSKSLSNRELQQTLAIPEQLSNAIYGKAIELIQNALPHKDIISNTENLLQTN YLNGKKIIDEKIKYGARFTWTDANGNIINSQKYANIIAYYQPLRTKEIISPLSNQINGIQINSGIEFRAYIGQLITACFI ICGGFSGMRESELDKLTPNSYYIDNVDGRDFHMLQSSTFKLGEKRETWITAPITKQAIELVSTLTRTWRSQIEYPDSRYI NTLWCIQKARSIPPVLIKKWGLRLRIFCIKFNFLVTREDYQECIESNPSSLVKIKEIVTIGQPWPLAPHQLRRSLAFYAT KHRLATKVALKQQFKHLYLAMAEWYSNGGQLASMRNLTVDNEIQQALNAVNAEMTASKIFKQWHSNEPLSGSHGKAIVKM RGDIPHIYSTWDTIYRAVLKGTLTLHGTAHSYCKNGYDCDMDGIVMPQFCVDCAGHGSIIDKDQALWWQKKHLSLVTYME FGEDISVSERSHFITQIRAAENVMKDFDMPFIPFEPELKVTEL >Mature_683_residues MHNQNLYPDDFPEKYKFENIDLIELFHQKKWDKLNNIVICRDKTGKVTARFSDSEWDLTPYDRNHNGKNSFNFKGLDNEL ELQIEFKLIAYGLLFHKSRRGPAPKFSTVVSNISRLKTVYTYLKIAKQKSISHLSNKRSFEAFKSFLLTKNSSQRNLQNL FIALNNVIRLEPWLKYPLGFSEKLSVIALSKSLSNRELQQTLAIPEQLSNAIYGKAIELIQNALPHKDIISNTENLLQTN YLNGKKIIDEKIKYGARFTWTDANGNIINSQKYANIIAYYQPLRTKEIISPLSNQINGIQINSGIEFRAYIGQLITACFI ICGGFSGMRESELDKLTPNSYYIDNVDGRDFHMLQSSTFKLGEKRETWITAPITKQAIELVSTLTRTWRSQIEYPDSRYI NTLWCIQKARSIPPVLIKKWGLRLRIFCIKFNFLVTREDYQECIESNPSSLVKIKEIVTIGQPWPLAPHQLRRSLAFYAT KHRLATKVALKQQFKHLYLAMAEWYSNGGQLASMRNLTVDNEIQQALNAVNAEMTASKIFKQWHSNEPLSGSHGKAIVKM RGDIPHIYSTWDTIYRAVLKGTLTLHGTAHSYCKNGYDCDMDGIVMPQFCVDCAGHGSIIDKDQALWWQKKHLSLVTYME FGEDISVSERSHFITQIRAAENVMKDFDMPFIPFEPELKVTEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78709; Mature: 78709
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNQNLYPDDFPEKYKFENIDLIELFHQKKWDKLNNIVICRDKTGKVTARFSDSEWDLTP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCC YDRNHNGKNSFNFKGLDNELELQIEFKLIAYGLLFHKSRRGPAPKFSTVVSNISRLKTVY CCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH TYLKIAKQKSISHLSNKRSFEAFKSFLLTKNSSQRNLQNLFIALNNVIRLEPWLKYPLGF HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCHHCCCCCC SEKLSVIALSKSLSNRELQQTLAIPEQLSNAIYGKAIELIQNALPHKDIISNTENLLQTN CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHC YLNGKKIIDEKIKYGARFTWTDANGNIINSQKYANIIAYYQPLRTKEIISPLSNQINGIQ CCCCHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE INSGIEFRAYIGQLITACFIICGGFSGMRESELDKLTPNSYYIDNVDGRDFHMLQSSTFK ECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCEEHHHHHHHC LGEKRETWITAPITKQAIELVSTLTRTWRSQIEYPDSRYINTLWCIQKARSIPPVLIKKW CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHC GLRLRIFCIKFNFLVTREDYQECIESNPSSLVKIKEIVTIGQPWPLAPHQLRRSLAFYAT CCEEEEEEEEEEEEEEHHHHHHHHHCCCHHHEEHHHHHCCCCCCCCCHHHHHHHHHHHHH KHRLATKVALKQQFKHLYLAMAEWYSNGGQLASMRNLTVDNEIQQALNAVNAEMTASKIF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHHHHHHCHHHHHHHHH KQWHSNEPLSGSHGKAIVKMRGDIPHIYSTWDTIYRAVLKGTLTLHGTAHSYCKNGYDCD HHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCC MDGIVMPQFCVDCAGHGSIIDKDQALWWQKKHLSLVTYMEFGEDISVSERSHFITQIRAA CCCEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHHHHHH ENVMKDFDMPFIPFEPELKVTEL HHHHHHCCCCCCCCCCCCEEECC >Mature Secondary Structure MHNQNLYPDDFPEKYKFENIDLIELFHQKKWDKLNNIVICRDKTGKVTARFSDSEWDLTP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCC YDRNHNGKNSFNFKGLDNELELQIEFKLIAYGLLFHKSRRGPAPKFSTVVSNISRLKTVY CCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH TYLKIAKQKSISHLSNKRSFEAFKSFLLTKNSSQRNLQNLFIALNNVIRLEPWLKYPLGF HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEECCHHCCCCCC SEKLSVIALSKSLSNRELQQTLAIPEQLSNAIYGKAIELIQNALPHKDIISNTENLLQTN CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHC YLNGKKIIDEKIKYGARFTWTDANGNIINSQKYANIIAYYQPLRTKEIISPLSNQINGIQ CCCCHHHHHHHHHCCCEEEEECCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEE INSGIEFRAYIGQLITACFIICGGFSGMRESELDKLTPNSYYIDNVDGRDFHMLQSSTFK ECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCEEHHHHHHHC LGEKRETWITAPITKQAIELVSTLTRTWRSQIEYPDSRYINTLWCIQKARSIPPVLIKKW CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHC GLRLRIFCIKFNFLVTREDYQECIESNPSSLVKIKEIVTIGQPWPLAPHQLRRSLAFYAT CCEEEEEEEEEEEEEEHHHHHHHHHCCCHHHEEHHHHHCCCCCCCCCHHHHHHHHHHHHH KHRLATKVALKQQFKHLYLAMAEWYSNGGQLASMRNLTVDNEIQQALNAVNAEMTASKIF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHHHHHHCHHHHHHHHH KQWHSNEPLSGSHGKAIVKMRGDIPHIYSTWDTIYRAVLKGTLTLHGTAHSYCKNGYDCD HHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHCCCCCCC MDGIVMPQFCVDCAGHGSIIDKDQALWWQKKHLSLVTYMEFGEDISVSERSHFITQIRAA CCCEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHHHHHH ENVMKDFDMPFIPFEPELKVTEL HHHHHHCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA