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The map label for this gene is exbD [C]

Identifier: 160877474

GI number: 160877474

Start: 5168371

End: 5168841

Strand: Direct

Name: exbD [C]

Synonym: Sbal195_4372

Alternate gene names: 160877474

Gene position: 5168371-5168841 (Clockwise)

Preceding gene: 160877473

Following gene: 160877475

Centisome position: 96.65

GC content: 50.32

Gene sequence:

>471_bases
ATGCAAGCGCCATTTAGTCAACGACCAAGACTCACGGCTCATCCTTCAAAACGTAAAGCTGTGATTAGCTTAACGCCACT
CATTGATGTGGTGTTTATCCTATTGGTGTTTTTTATGCTGTCTTCCAGTTTTCTAGACTGGCGCACTGTGGCGCTCGATA
CCAGCACGGCAGGTAGCCCCGCTCCCGCTGAGCAAGCGCCATTTTTAGTACAAATTAGCGCAGACCAACTGCAACTAAAC
GGCGAAACGATCACACTGGAAGCATTACAGCAAAAAGCACAAGGGCGCCAGCCTGCAAGCCAGATAGTGAGCCTACAGCC
GCAGGCGGATACTCCAGTACAAAGGTTAGTACAGGTATTGGATGCACTTAATGCCGCAGGGATTACGCCGCTAACACTGG
TAGAAGACTCCAATTGGCAACCCGCACCTGCGACGAAAGCGGACGGCAATAACATGGAGAACAACCACTAA

Upstream 100 bases:

>100_bases
GTGACGCAACTGTTTACCCCAGAGTTATCGGCGGCCAGCACTTATCAAGCGCCAAGCACTGTGGTTACACCACTCACAGC
CAATAACAAACAGGCACGCC

Downstream 100 bases:

>100_bases
TGCATTTTCCTGAACGTCGGCCGGACCAAACCGAAGAACGTATTTTGCCGCTGATTAATGTGGTGTTCTTGCTGTTAATC
TTTTTTATGATCGCAGGTAG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MQAPFSQRPRLTAHPSKRKAVISLTPLIDVVFILLVFFMLSSSFLDWRTVALDTSTAGSPAPAEQAPFLVQISADQLQLN
GETITLEALQQKAQGRQPASQIVSLQPQADTPVQRLVQVLDALNAAGITPLTLVEDSNWQPAPATKADGNNMENNH

Sequences:

>Translated_156_residues
MQAPFSQRPRLTAHPSKRKAVISLTPLIDVVFILLVFFMLSSSFLDWRTVALDTSTAGSPAPAEQAPFLVQISADQLQLN
GETITLEALQQKAQGRQPASQIVSLQPQADTPVQRLVQVLDALNAAGITPLTLVEDSNWQPAPATKADGNNMENNH
>Mature_156_residues
MQAPFSQRPRLTAHPSKRKAVISLTPLIDVVFILLVFFMLSSSFLDWRTVALDTSTAGSPAPAEQAPFLVQISADQLQLN
GETITLEALQQKAQGRQPASQIVSLQPQADTPVQRLVQVLDALNAAGITPLTLVEDSNWQPAPATKADGNNMENNH

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16894; Mature: 16894

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAPFSQRPRLTAHPSKRKAVISLTPLIDVVFILLVFFMLSSSFLDWRTVALDTSTAGSP
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
APAEQAPFLVQISADQLQLNGETITLEALQQKAQGRQPASQIVSLQPQADTPVQRLVQVL
CCCCCCCEEEEEECCEEEECCCEEEHHHHHHHHCCCCCHHHHEECCCCCCCHHHHHHHHH
DALNAAGITPLTLVEDSNWQPAPATKADGNNMENNH
HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQAPFSQRPRLTAHPSKRKAVISLTPLIDVVFILLVFFMLSSSFLDWRTVALDTSTAGSP
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
APAEQAPFLVQISADQLQLNGETITLEALQQKAQGRQPASQIVSLQPQADTPVQRLVQVL
CCCCCCCEEEEEECCEEEECCCEEEHHHHHHHHCCCCCHHHHEECCCCCCCHHHHHHHHH
DALNAAGITPLTLVEDSNWQPAPATKADGNNMENNH
HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA