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The map label for this gene is cyoD [H]

Identifier: 160877455

GI number: 160877455

Start: 5146984

End: 5147325

Strand: Direct

Name: cyoD [H]

Synonym: Sbal195_4353

Alternate gene names: 160877455

Gene position: 5146984-5147325 (Clockwise)

Preceding gene: 160877454

Following gene: 160877456

Centisome position: 96.25

GC content: 46.49

Gene sequence:

>342_bases
ATGAGCGCACATAGTCATACTGATAAGCCTAGCCATGGCACTGACGATCTGGCCGCGAGCATTAAGTCATATCTAATGGG
CTTTGTGCTGTCAGTGGTATTAACCGCCATTCCGTTTTGGGCCGTAATGACCCATCACTTCGAGAAAGCGACCACCCTTA
GCTTAGTGCTAGTGATGGCGATAGTGCAGATAGTGGTACATCTTAAGTACTTCTTGCACTTAGATTTCTCGAAAGAAGGC
AAAGTAAACACCTTCTCCTTCCTGTTTACCGCCCTGATTATTGTCATGGTAGTCGGCTTGTCGGTGTGGATCATACTCGA
AGCCAACGCTTTGATGATGTAA

Upstream 100 bases:

>100_bases
GCAGCATCACCCGCCTGAGCTGCTTAAGCTTGTTCTGGCATTTCCTCGACATAGTGTGGATTTGTGTATTCACGGTCGTG
TATTTATTGGGAGCACTTTA

Downstream 100 bases:

>100_bases
CGAGAAACAGTCTATGCAAATACAAGACAGATTTATGTCACCGCAATGGAAAGCACGCTTCAAAGGGTATGTACAGGTGA
CTAAGCCTGGCATCATTTTC

Product: cytochrome o ubiquinol oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Cytochrome o ubiquinol oxidase subunit IV [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSAHSHTDKPSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFEKATTLSLVLVMAIVQIVVHLKYFLHLDFSKEG
KVNTFSFLFTALIIVMVVGLSVWIILEANALMM

Sequences:

>Translated_113_residues
MSAHSHTDKPSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFEKATTLSLVLVMAIVQIVVHLKYFLHLDFSKEG
KVNTFSFLFTALIIVMVVGLSVWIILEANALMM
>Mature_112_residues
SAHSHTDKPSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFEKATTLSLVLVMAIVQIVVHLKYFLHLDFSKEGK
VNTFSFLFTALIIVMVVGLSVWIILEANALMM

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=106, Percent_Identity=45.2830188679245, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 12549; Mature: 12418

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHSHTDKPSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFEKATTLSLVLVMA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVQIVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC
>Mature Secondary Structure 
SAHSHTDKPSHGTDDLAASIKSYLMGFVLSVVLTAIPFWAVMTHHFEKATTLSLVLVMA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVQIVVHLKYFLHLDFSKEGKVNTFSFLFTALIIVMVVGLSVWIILEANALMM
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]