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The map label for this gene is cyoA [H]

Identifier: 160877452

GI number: 160877452

Start: 5143325

End: 5144380

Strand: Direct

Name: cyoA [H]

Synonym: Sbal195_4350

Alternate gene names: 160877452

Gene position: 5143325-5144380 (Clockwise)

Preceding gene: 160877451

Following gene: 160877453

Centisome position: 96.19

GC content: 49.05

Gene sequence:

>1056_bases
ATGCTCGCGGGTTGTGATGGCGGTGTGTTGGACCCTAAGGGCCAAATCGGTATCGATGAAAAACACCTGATTATCGTCGC
CACCCTACTCATGCTGATTGTTGTTATCCCTGTGATTGCCATGACATTGTACTTCGCGTGGAAATATCGCGATGGCCGTG
ATCAAGAAATCTATGCGCCTAAATGGGCACACTCAACAGCGATTGAAACCGTCGTGTGGATAGTGCCGATTGTGATCGTA
ATAGTGCTAGGTGTGATCACTTGGGGTTCGACCCATGATCTTGATCCATATAAGCCTTTAGTGCACGAAGCTAAACCCGT
CACGGTTGAAGTGGTGTCGCTGGACTGGAAATGGTTATTCATTTATCCAGAACAAGGCGTGGCATCGGTCAATGAGTTGG
CGTTTCCAGCCAATGTGCCGGTGAACTTTAAGATCACCTCTGATACTGCGATGAACTCCTTCTTCATCCCGCAGTTAGGC
AGCCAGATTTACTCTATGGCGGGCATGACTACTAAATTGCATTTGATCGCTAACGAGCCAGGCACCTTCGATGGTATCTC
GGCTAACTACAGCGGCGCCGGATTTGCGGGCATGAAGTTTAAAGCGATTGCCACTCAGACACCTGCCGACTTCGATGCAT
GGGTTGCCAAGTTAAAACAACAGGGCAAGACATTGGACTCAGCGGCCTACACCACACTGGCTAAACCGAGTGAATACAAT
CCGGTTGAATACTTTGGTTCAGTGAGCAAAGGGATGTTTGACCAAATCGTGATGCAATACATGCACATGGACTCACATGA
CGGCATGAAAGGTCACGAAGAAATGGACATGCACGCAGGCATGGAACACATGGGCACTGAGCACACATCTGACATGGCAG
ACATGAAAGGTATGCACGACATGGCACATATGGCAGGCGAGCACGCGATGGAAAATACACAGAACATGGCCGACATGGAT
AGCTCAACACCTTCTGTACCGTCATCAACACAGGACTCATCCACAGAACCTTTATCCTTAGAGCACTCATCCACTCAAAA
AGTGGAGGCGGAGTAA

Upstream 100 bases:

>100_bases
GCCGGTTCACGCTTGGCAGAGTTGTAAACCTTAGGGTTAGAGGAATCTTCCTTTGTTAATTCGAAAATTAAGTAAAGCAG
CAATCGCGGCAGTAGCATTC

Downstream 100 bases:

>100_bases
TCATGTCATTTCTCGGTAAATTAAGCTTAGATGCGATTCCGTATCACGAGCCTATCATCATGGTGACCTTAGCGGTCGTC
GCAGTGGTAGGTTTGTATAT

Product: ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MLAGCDGGVLDPKGQIGIDEKHLIIVATLLMLIVVIPVIAMTLYFAWKYRDGRDQEIYAPKWAHSTAIETVVWIVPIVIV
IVLGVITWGSTHDLDPYKPLVHEAKPVTVEVVSLDWKWLFIYPEQGVASVNELAFPANVPVNFKITSDTAMNSFFIPQLG
SQIYSMAGMTTKLHLIANEPGTFDGISANYSGAGFAGMKFKAIATQTPADFDAWVAKLKQQGKTLDSAAYTTLAKPSEYN
PVEYFGSVSKGMFDQIVMQYMHMDSHDGMKGHEEMDMHAGMEHMGTEHTSDMADMKGMHDMAHMAGEHAMENTQNMADMD
SSTPSVPSSTQDSSTEPLSLEHSSTQKVEAE

Sequences:

>Translated_351_residues
MLAGCDGGVLDPKGQIGIDEKHLIIVATLLMLIVVIPVIAMTLYFAWKYRDGRDQEIYAPKWAHSTAIETVVWIVPIVIV
IVLGVITWGSTHDLDPYKPLVHEAKPVTVEVVSLDWKWLFIYPEQGVASVNELAFPANVPVNFKITSDTAMNSFFIPQLG
SQIYSMAGMTTKLHLIANEPGTFDGISANYSGAGFAGMKFKAIATQTPADFDAWVAKLKQQGKTLDSAAYTTLAKPSEYN
PVEYFGSVSKGMFDQIVMQYMHMDSHDGMKGHEEMDMHAGMEHMGTEHTSDMADMKGMHDMAHMAGEHAMENTQNMADMD
SSTPSVPSSTQDSSTEPLSLEHSSTQKVEAE
>Mature_351_residues
MLAGCDGGVLDPKGQIGIDEKHLIIVATLLMLIVVIPVIAMTLYFAWKYRDGRDQEIYAPKWAHSTAIETVVWIVPIVIV
IVLGVITWGSTHDLDPYKPLVHEAKPVTVEVVSLDWKWLFIYPEQGVASVNELAFPANVPVNFKITSDTAMNSFFIPQLG
SQIYSMAGMTTKLHLIANEPGTFDGISANYSGAGFAGMKFKAIATQTPADFDAWVAKLKQQGKTLDSAAYTTLAKPSEYN
PVEYFGSVSKGMFDQIVMQYMHMDSHDGMKGHEEMDMHAGMEHMGTEHTSDMADMKGMHDMAHMAGEHAMENTQNMADMD
SSTPSVPSSTQDSSTEPLSLEHSSTQKVEAE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=290, Percent_Identity=59.6551724137931, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 38543; Mature: 38543

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGCDGGVLDPKGQIGIDEKHLIIVATLLMLIVVIPVIAMTLYFAWKYRDGRDQEIYAP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEECC
KWAHSTAIETVVWIVPIVIVIVLGVITWGSTHDLDPYKPLVHEAKPVTVEVVSLDWKWLF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECEEEEE
IYPEQGVASVNELAFPANVPVNFKITSDTAMNSFFIPQLGSQIYSMAGMTTKLHLIANEP
EECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCC
GTFDGISANYSGAGFAGMKFKAIATQTPADFDAWVAKLKQQGKTLDSAAYTTLAKPSEYN
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
PVEYFGSVSKGMFDQIVMQYMHMDSHDGMKGHEEMDMHAGMEHMGTEHTSDMADMKGMHD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHCCCCHHHHHHHHHHHH
MAHMAGEHAMENTQNMADMDSSTPSVPSSTQDSSTEPLSLEHSSTQKVEAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MLAGCDGGVLDPKGQIGIDEKHLIIVATLLMLIVVIPVIAMTLYFAWKYRDGRDQEIYAP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEECC
KWAHSTAIETVVWIVPIVIVIVLGVITWGSTHDLDPYKPLVHEAKPVTVEVVSLDWKWLF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEECEEEEE
IYPEQGVASVNELAFPANVPVNFKITSDTAMNSFFIPQLGSQIYSMAGMTTKLHLIANEP
EECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCC
GTFDGISANYSGAGFAGMKFKAIATQTPADFDAWVAKLKQQGKTLDSAAYTTLAKPSEYN
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
PVEYFGSVSKGMFDQIVMQYMHMDSHDGMKGHEEMDMHAGMEHMGTEHTSDMADMKGMHD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCHHHHCCCCHHHHHHHHHHHH
MAHMAGEHAMENTQNMADMDSSTPSVPSSTQDSSTEPLSLEHSSTQKVEAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]