| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is nuoI [C]
Identifier: 160877323
GI number: 160877323
Start: 4995045
End: 4996706
Strand: Direct
Name: nuoI [C]
Synonym: Sbal195_4221
Alternate gene names: 160877323
Gene position: 4995045-4996706 (Clockwise)
Preceding gene: 160877322
Following gene: 160877324
Centisome position: 93.41
GC content: 49.64
Gene sequence:
>1662_bases ATGACCAATCAAACCCAAGAAGCGTTAAAACAAGCGCGGCAACAGGTGTTAGCGCAAACTCAGATGCTGCAGAATCTGAT CCCGCCAACCGTCAGCTACACCACCGAAGGCAATGTCCTCATTATCGGCCCAGAAGATCTGGCTCGCCTTGCCGCGGACA AATTGTCCACTATGGCCCATCGCGTGATTTTAGCCAATGAAGCCATTACCAGCCAAGACGAAGCGCACCTTGAGCATGTG ATGGCGGCGGCAACCGATGTCGAAAGTTACTACAACAAACTCATTGGCGTAAAAGGCTTTTTAGGCCAATTCCAAGTCAG TGTAGAACATCAAGATGGCGCGGCCGAACTCAGTTTAGTGTCGATTCGTAAACCCCATTTCGATATCGTGCTCGATTTGA GCAGCACAGCTTGTTTGAACTTAGAGATGCTGCCACCCGGTTATTTCTATGTCGGTCAAGACGCTGAAAAACTCGAAGAT GCCCTCGCGCAAATTCCCGATCTTGTCGGCCAATTCGATAAGCCTCGCTACGTCAAAATCAACCCAGATATTTGTGCCCA TGACCGCAATGGCATCAATGGTTGTAATCGTTGCCTTAACTTTTGCCCAGCCGATGCGATTAGTAGCGTGGCGAAGAAAA TTGAAATCGACCCATACCTTTGCCACGGCGCGGGCAGTTGTACCAGCGCTTGTCCAACGGGTGCCATCAGTTACGATTTA CCGACGCCGCAGGCTTTGCATTCATACCTGAACAAAGTCGTTAGTCGTTTCCGCGAGCAAGCCCAAACCGCACCGGTAAT TTTGTTCCACGACAATGCCGTCGGCGCCGACTTTATTACCGATGATCTAGCGGGTGATATTATCCCCGTCGCCTTAGAAG AAATTACGGTTGCCAGCTTAGATCATTGGCTGTCGGTACTCGCATGGGGCGCACGCCAAGTGCTGATCCTCAATACCGAC GCCACAGCGCCAACTCTTACACAAATGCTTAAAGGCGAGCTTTCGTTAGCCAACAGTATTTTAGATGAGATGGGCCAGCC GCAACGTATCAGCCTCATCGACCCAAGCATGCTTGACGATTTAGATTCGATGCTCGATATCAGCTTAGATTGGCCCGTGA TCGTGCCCGCTGCATTTGCCTCGACCACTAAACGCAACACGCTATTTGAAGCGATAGATCACCTCAATAGCCAAGCGGGT GAAATTGATACTTGCCTTAGCCTCAACAACATTCCCTTTGGCAAAGTCAGCGTGAATGTCGAAAAGTGCACTATGTGCAT GTCCTGCGTGGCAATTTGTCCAACCGTGGCATTGCAAGATGGCGGCGACAAACCTGCACTACACTTTATTGAGCAAAACT GCGTGCAATGCGGTTTATGTGAAGCGGCCTGTCCTGAAAAAGTGATTAGCCTAACGCCACAAATTAATTTTGATAAAGCT GCTCGTCAGCAACAACACACCCTGAAAGAAGAAGCCCCCTTCGAATGTATTCGCTGCGGCTCTCCTTTTGCGACCCAATC TATGGTGCATCGGATGCTGGATATGGTCGGCGCGCACAGCGCATTTTCTGCCAATATTGAGCGCTTGAAAATGTGTGGCG ACTGCCGGGTAAAAGACATGTTTGAAGACATTCTTCAAGATCCTGAAAAGCAACTGCGATAA
Upstream 100 bases:
>100_bases CAATGACTTACTTATTACCAGCCGCCTAAATCTGCCCAGATACAGTAAAACAAGAAACAGCCAAAGTACTGTTCAGGAAC GCAATGTGAGCACTCATTTG
Downstream 100 bases:
>100_bases GAGATCCGCTATGACCGAATCAGTAAGACAAGTTTCAGAAAACGATCAGTTGAGAGCCGATATCTATCAACTGTTAGCCG CCCTATTGCGCCGCCAGCCG
Product: 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein
Products: NAD+; ubiquinol [C]
Alternate protein names: 4Fe-4S Ferredoxin; 4fe-4S Ferredoxin; Methyl-Viologen-Reducing Hydrogenase Delta Subunit; NAD(P)H-Quinone Oxidoreductase Chain I; Polyferredoxins; Ferridoxin Protein
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTNQTQEALKQARQQVLAQTQMLQNLIPPTVSYTTEGNVLIIGPEDLARLAADKLSTMAHRVILANEAITSQDEAHLEHV MAAATDVESYYNKLIGVKGFLGQFQVSVEHQDGAAELSLVSIRKPHFDIVLDLSSTACLNLEMLPPGYFYVGQDAEKLED ALAQIPDLVGQFDKPRYVKINPDICAHDRNGINGCNRCLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDL PTPQALHSYLNKVVSRFREQAQTAPVILFHDNAVGADFITDDLAGDIIPVALEEITVASLDHWLSVLAWGARQVLILNTD ATAPTLTQMLKGELSLANSILDEMGQPQRISLIDPSMLDDLDSMLDISLDWPVIVPAAFASTTKRNTLFEAIDHLNSQAG EIDTCLSLNNIPFGKVSVNVEKCTMCMSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISLTPQINFDKA ARQQQHTLKEEAPFECIRCGSPFATQSMVHRMLDMVGAHSAFSANIERLKMCGDCRVKDMFEDILQDPEKQLR
Sequences:
>Translated_553_residues MTNQTQEALKQARQQVLAQTQMLQNLIPPTVSYTTEGNVLIIGPEDLARLAADKLSTMAHRVILANEAITSQDEAHLEHV MAAATDVESYYNKLIGVKGFLGQFQVSVEHQDGAAELSLVSIRKPHFDIVLDLSSTACLNLEMLPPGYFYVGQDAEKLED ALAQIPDLVGQFDKPRYVKINPDICAHDRNGINGCNRCLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDL PTPQALHSYLNKVVSRFREQAQTAPVILFHDNAVGADFITDDLAGDIIPVALEEITVASLDHWLSVLAWGARQVLILNTD ATAPTLTQMLKGELSLANSILDEMGQPQRISLIDPSMLDDLDSMLDISLDWPVIVPAAFASTTKRNTLFEAIDHLNSQAG EIDTCLSLNNIPFGKVSVNVEKCTMCMSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISLTPQINFDKA ARQQQHTLKEEAPFECIRCGSPFATQSMVHRMLDMVGAHSAFSANIERLKMCGDCRVKDMFEDILQDPEKQLR >Mature_552_residues TNQTQEALKQARQQVLAQTQMLQNLIPPTVSYTTEGNVLIIGPEDLARLAADKLSTMAHRVILANEAITSQDEAHLEHVM AAATDVESYYNKLIGVKGFLGQFQVSVEHQDGAAELSLVSIRKPHFDIVLDLSSTACLNLEMLPPGYFYVGQDAEKLEDA LAQIPDLVGQFDKPRYVKINPDICAHDRNGINGCNRCLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDLP TPQALHSYLNKVVSRFREQAQTAPVILFHDNAVGADFITDDLAGDIIPVALEEITVASLDHWLSVLAWGARQVLILNTDA TAPTLTQMLKGELSLANSILDEMGQPQRISLIDPSMLDDLDSMLDISLDWPVIVPAAFASTTKRNTLFEAIDHLNSQAGE IDTCLSLNNIPFGKVSVNVEKCTMCMSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISLTPQINFDKAA RQQQHTLKEEAPFECIRCGSPFATQSMVHRMLDMVGAHSAFSANIERLKMCGDCRVKDMFEDILQDPEKQLR
Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.6.99.5 [C]
Molecular weight: Translated: 60428; Mature: 60297
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQTQEALKQARQQVLAQTQMLQNLIPPTVSYTTEGNVLIIGPEDLARLAADKLSTMAH CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHH RVILANEAITSQDEAHLEHVMAAATDVESYYNKLIGVKGFLGQFQVSVEHQDGAAELSLV HHHEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEE SIRKPHFDIVLDLSSTACLNLEMLPPGYFYVGQDAEKLEDALAQIPDLVGQFDKPRYVKI EECCCCEEEEEECCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEE NPDICAHDRNGINGCNRCLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDL CCCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEECCC PTPQALHSYLNKVVSRFREQAQTAPVILFHDNAVGADFITDDLAGDIIPVALEEITVASL CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHH DHWLSVLAWGARQVLILNTDATAPTLTQMLKGELSLANSILDEMGQPQRISLIDPSMLDD HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH LDSMLDISLDWPVIVPAAFASTTKRNTLFEAIDHLNSQAGEIDTCLSLNNIPFGKVSVNV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCEEEECH EKCTMCMSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISLTPQINFDKA HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHCCCCCCHHHH ARQQQHTLKEEAPFECIRCGSPFATQSMVHRMLDMVGAHSAFSANIERLKMCGDCRVKDM HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH FEDILQDPEKQLR HHHHHCCHHHHCC >Mature Secondary Structure TNQTQEALKQARQQVLAQTQMLQNLIPPTVSYTTEGNVLIIGPEDLARLAADKLSTMAH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHH RVILANEAITSQDEAHLEHVMAAATDVESYYNKLIGVKGFLGQFQVSVEHQDGAAELSLV HHHEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEE SIRKPHFDIVLDLSSTACLNLEMLPPGYFYVGQDAEKLEDALAQIPDLVGQFDKPRYVKI EECCCCEEEEEECCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEE NPDICAHDRNGINGCNRCLNFCPADAISSVAKKIEIDPYLCHGAGSCTSACPTGAISYDL CCCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEECCC PTPQALHSYLNKVVSRFREQAQTAPVILFHDNAVGADFITDDLAGDIIPVALEEITVASL CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHH DHWLSVLAWGARQVLILNTDATAPTLTQMLKGELSLANSILDEMGQPQRISLIDPSMLDD HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH LDSMLDISLDWPVIVPAAFASTTKRNTLFEAIDHLNSQAGEIDTCLSLNNIPFGKVSVNV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCEEEECH EKCTMCMSCVAICPTVALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISLTPQINFDKA HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHCCCCCCHHHH ARQQQHTLKEEAPFECIRCGSPFATQSMVHRMLDMVGAHSAFSANIERLKMCGDCRVKDM HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHH FEDILQDPEKQLR HHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Iron [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; ubiquinone [C]
Specific reaction: NADH + ubiquinone = NAD+ + ubiquinol [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA