| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is mrcA [H]
Identifier: 160877310
GI number: 160877310
Start: 4971881
End: 4974349
Strand: Direct
Name: mrcA [H]
Synonym: Sbal195_4208
Alternate gene names: 160877310
Gene position: 4971881-4974349 (Clockwise)
Preceding gene: 160877300
Following gene: 160877316
Centisome position: 92.98
GC content: 47.95
Gene sequence:
>2469_bases GTGGCAGCATACTTTTATGTTTTGCCGGATTTGCCGGATGTTTCAACACTAAAAAATGTGCAACTTCAAACACCTTTACG CATCTACAGCAGTGACGGCAAACTTATTTCACAATTTGGTGAGAAACGTCGCATTCCATTGAAGTTAGACGAAGTGCCAA AACCCCTACTTCAAGCGTTTATCGCAACTGAAGATGCGCGTTTTTACGAGCATGGTGGTATAGATCCTGTAGGTGTACTT CGCGCCGCATTAGTGATGTTGACCACAGGTGAGAAAAAGCAAGGTGCCAGTACCATTACCATGCAGGTTGCGCGTAACTT CTTCTTAACCCGCGATAAAACCATTATTCGTAAAGTGAAGGAGATTTTTATCTCCTATCACATTGAAGAATTACTCACCA AAGACGAGATTTTAGAACTCTATGTGAACCGCATTTACTTAGGCCAACGCGCCTATGGTGTTGGTGCCGCTGCACAAGTT TATTTCGGTAAAGATGTTAAAGACCTTACACTCTCAGAAATGAGTATGATCGCGGGCTTACCCAAAGCGCCTTCGACACT CAACCCTGTGACCTCACCTTCTCGTGCCGTCGCTCGCCGTAATGTCGTCCTCATGCGGATGAATGAAGTAGGTTACATCA GCCAAGCCGAATACCAAGCCGCACTACAAGAACCGCTGGTCGCTAAATACCACGGCGCCGAAATTGATCTCTATGCGCCG TATATTTCTGAAATGGCACGAGATTATATGGTGCAAAAGTACGGAGAAGAAGAAGCTTATACCAATGGCTACAACGTCTA CACAACCATTTCATCGGATATACAGCTGAAAGCTCAGCAAGCATTACGTAATAACGTTTATGCCTATGATGAGCGTCATG GCTACCGTGGTCCTGCCGCCGTTCTGTGGACAGATGAAAAACCAGATCAAGCTCAAATCAAGGCTGAACTGGCCAAGGTG GCTTCAATTCAAGAACTGCAACCCGCAGCAGTCATCAGCGTGGCAGATCAACAAGCCAGTGTCATGACCGCCAAGGGCGA GACTAAAGTCATTACTTGGGATGGTTTGAAGTGGGCGCGTAAATTTATTACCGATAAGCGTCAAGGCAGTGTACCTAAAT CAGCTTCTGACATGCTCAAGGTTGGTGAGCGTATTTGGATCCGTGATAACGGCCAATATTTGCAGTTATCGCAAGTACCA GAAGTTGCCAGCGCGACTGTGTCACTCGACCCACAAAATGGTGCGATTCGTTCTTTAGTCGGCGGATATAGCTTTAGCCA AAGTCAGTACAACCGTGTCACTCAAGCAAAACGCCAATTAGGTTCGAATATCAAACCTTTCATCTATGCTGGCGCATTAG AGAAAGGCTTTACCTTAGCGACCCTCATCAACAATGCACCGATCAATAAACCCGATATCAGCCAAGGAACCGCATGGCGC CCTAAAAACTCGCCTGATATCTATGGCGGCCCAACCCGTTTACGCGTGGGCTTAGCGCAATCAATCAACGTGATGTCTGT GCGTGCAATGCGCCATGTTGGACTCGATGCCACCATTGCAGAATTGATTAAATTTGGTTTCGACCCTAATGACTTACCGC GTAACGAGTCGATTGCATTAGGTTCGTCTTCAGTAACGCCATTACAAGTGGTCACGGCATTTAACGTGTTTGCTAACGGC GGTTTCTTACTCGAACCTTTCTATATCGATCGCGTCGAAGATGCCTATGGTAATGTGATTGAAAAAGCGAATCCAACATT GGCCTGTAAGCCTAACCAAAGTCTTAGCCAACCAGTTACACCGAGCGATCCTATGGCGTACAGTGTTAGTGGAGACTCTA GTGCTCAACCGAGTGCACCTGTTGCCCAGTGTTTCGAGCAAACGGGTCGCTTTGCGCCACAGATCATTTCAGAGCAAACG GCATTCCTCATCACCGAGGCGTTAAAGAGCGTGATCTGGGGTGGCGGTGATTGGAGTCACGGCACTGGCTGGCAAGGTAC GGCTTGGCGTGCTGCAAGATTGATTAAACGCCATGATATTGCGGGTAAAACAGGTACAACCAACGAATCTCGCGATACGT GGTTCAGTGGATTTAGCCCTGTGCTCACCAGTACGTTCTGGGTCGGCTTCGACGATCACGGTCGACAACTGGGCAGAACT GCATGGAATGCCAGCGCAGAGAAAGATCAGATCACCGGCGCCGAAGCCGGCGCGAAAACGGCAGGTCCGGGTTGGAACGA GTTTATGAACAGTGTCTTACAAGGCACACCTGAAACCACATCGATTCCACCAGAAGGCATTGTCTCGGTACGGATCGATT TAGCAACGGGTAAACTCACGCGTAAAACTGACTATACCAGCGCATTCGAATACTTCATCTCGGGCACTGAGCCGAAGGAA TACATCAGCGAAACTCAGGATGAGAACAACATCTTCATCGATGCGCCAACTGACGATCTATTCCAATAA
Upstream 100 bases:
>100_bases TGTCGCACTTAACGGAACATTAGGATAAATTTTGGTGAAGTGGTTAAAACGTATTGTTATAGCACTATTCAGTCTAGCCC TTTTGGGAGTAGGCGCCATT
Downstream 100 bases:
>100_bases ACGACTCATAGAAAGTCATTGCCCATACGGATAATGACCCAATAAAAAACGCGACTTAACGTCGCGTTTTTTATTGGCTT GTTGATTTGAACAACTTGCC
Product: 1A family penicillin-binding protein
Products: NA
Alternate protein names: PBP-1a; PBP1a; Penicillin-insensitive transglycosylase; Peptidoglycan TGase; Penicillin-sensitive transpeptidase; DD-transpeptidase [H]
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQAFIATEDARFYEHGGIDPVGVL RAALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAAQV YFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEYQAALQEPLVAKYHGAEIDLYAP YISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGPAAVLWTDEKPDQAQIKAELAKV ASIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQVP EVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFTLATLINNAPINKPDISQGTAWR PKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESIALGSSSVTPLQVVTAFNVFANG GFLLEPFYIDRVEDAYGNVIEKANPTLACKPNQSLSQPVTPSDPMAYSVSGDSSAQPSAPVAQCFEQTGRFAPQIISEQT AFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGFSPVLTSTFWVGFDDHGRQLGRT AWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGKLTRKTDYTSAFEYFISGTEPKE YISETQDENNIFIDAPTDDLFQ
Sequences:
>Translated_822_residues MAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQAFIATEDARFYEHGGIDPVGVL RAALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAAQV YFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEYQAALQEPLVAKYHGAEIDLYAP YISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGPAAVLWTDEKPDQAQIKAELAKV ASIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQVP EVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFTLATLINNAPINKPDISQGTAWR PKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESIALGSSSVTPLQVVTAFNVFANG GFLLEPFYIDRVEDAYGNVIEKANPTLACKPNQSLSQPVTPSDPMAYSVSGDSSAQPSAPVAQCFEQTGRFAPQIISEQT AFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGFSPVLTSTFWVGFDDHGRQLGRT AWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGKLTRKTDYTSAFEYFISGTEPKE YISETQDENNIFIDAPTDDLFQ >Mature_821_residues AAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQAFIATEDARFYEHGGIDPVGVLR AALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAAQVY FGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEYQAALQEPLVAKYHGAEIDLYAPY ISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGPAAVLWTDEKPDQAQIKAELAKVA SIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQVPE VASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFTLATLINNAPINKPDISQGTAWRP KNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESIALGSSSVTPLQVVTAFNVFANGG FLLEPFYIDRVEDAYGNVIEKANPTLACKPNQSLSQPVTPSDPMAYSVSGDSSAQPSAPVAQCFEQTGRFAPQIISEQTA FLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGFSPVLTSTFWVGFDDHGRQLGRTA WNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGKLTRKTDYTSAFEYFISGTEPKEY ISETQDENNIFIDAPTDDLFQ
Specific function: Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal
COG id: COG5009
COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=818, Percent_Identity=51.5892420537897, Blast_Score=833, Evalue=0.0, Organism=Escherichia coli, GI1788867, Length=260, Percent_Identity=33.8461538461538, Blast_Score=133, Evalue=5e-32, Organism=Escherichia coli, GI1786343, Length=275, Percent_Identity=31.6363636363636, Blast_Score=132, Evalue=8e-32, Organism=Escherichia coli, GI1789601, Length=166, Percent_Identity=34.3373493975904, Blast_Score=87, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.-
Molecular weight: Translated: 90536; Mature: 90405
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQAF CCEEEEECCCCCCHHHHCCCEECCCEEEECCCCHHHHHHHHCCCCCEEHHHCCHHHHHHH IATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVK HHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH EIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAAQVYFGKDVKDLTLSEMSMIAGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCC PKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEYQAALQEPLVAKYHGAEIDLYAP CCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCEEEEECH YISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGPAA HHHHHHHHHHHHHCCCCHHCCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEE VLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWAR EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEEEECCHHHHH KFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQVPEVASATVSLDPQNGAIRSLV HHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEECCCCCHHHCEEEECCCCCHHHHHH GGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFTLATLINNAPINKPDISQGTAWR CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCC PKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESIAL CCCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEE GSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGNVIEKANPTLACKPNQSLSQPVT CCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC PSDPMAYSVSGDSSAQPSAPVAQCFEQTGRFAPQIISEQTAFLITEALKSVIWGGGDWSH CCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGFSPVLTSTFWVGFDDHGRQLGRT CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHEEECCCHHHHHHHHH AWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGKLT HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEE RKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTDDLFQ CCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCHHHCC >Mature Secondary Structure AAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQFGEKRRIPLKLDEVPKPLLQAF CEEEEECCCCCCHHHHCCCEECCCEEEECCCCHHHHHHHHCCCCCEEHHHCCHHHHHHH IATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGASTITMQVARNFFLTRDKTIIRKVK HHCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH EIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAAQVYFGKDVKDLTLSEMSMIAGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCC PKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEYQAALQEPLVAKYHGAEIDLYAP CCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCEEEEECH YISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKAQQALRNNVYAYDERHGYRGPAA HHHHHHHHHHHHHCCCCHHCCCCCEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCCCEE VLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQASVMTAKGETKVITWDGLKWAR EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEEEECCHHHHH KFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQVPEVASATVSLDPQNGAIRSLV HHHCCCCCCCCCCCHHHHHHCCCEEEEECCCCEEEECCCCCHHHCEEEECCCCCHHHHHH GGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFTLATLINNAPINKPDISQGTAWR CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCC PKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDATIAELIKFGFDPNDLPRNESIAL CCCCCCCCCCCHHEEEEHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEE GSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGNVIEKANPTLACKPNQSLSQPVT CCCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC PSDPMAYSVSGDSSAQPSAPVAQCFEQTGRFAPQIISEQTAFLITEALKSVIWGGGDWSH CCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGFSPVLTSTFWVGFDDHGRQLGRT CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHEEECCCHHHHHHHHH AWNASAEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPETTSIPPEGIVSVRIDLATGKLT HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEE RKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTDDLFQ CCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]