| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877282
Identifier: 160877282
GI number: 160877282
Start: 4946004
End: 4947224
Strand: Direct
Name: 160877282
Synonym: Sbal195_4179
Alternate gene names: NA
Gene position: 4946004-4947224 (Clockwise)
Preceding gene: 160877278
Following gene: 160877283
Centisome position: 92.5
GC content: 49.88
Gene sequence:
>1221_bases TTGGATAACGACGAGTTTATCGAAAAACGCAGATTTATCATAAAGCTAGGCAAGGCATTGCATAAGTTTGGCACACCCGC TTATCGCCTAGAAACCCACTTACAAACCGTTGCGCGCACCTTAGGTATCGAAGGCTACTTCCTTATCTCGCCAACTTCGA TGACCTTCGTTTTACAACACGATACAGATCAAGAATATAACCATGCCGCTCGGGTGAAGCCCGGCGAACTCGATTTAGGT TCACTCGCCCGCACCGATGAATTAGTCGATGAATTAACTTCGGGCAAGCGCACTTTGGCCGAGGCCTTAGACCGCTTAGA AGAAATCGCCAACAAACCCAATCCCTATGGCCCAGTGTTAACCTGTTTTTCCTTTGGTACTTCTGCCGCCGCCTTTGCCA TGTTGATGGGCACAGGTTGGAACGATGTATTTTGGTCGGGGTTATTAGGCTTATTTGTCTATGGCTTGGTATACCGCGCC GAACGCTCGGCACGCATGGCCGAAGTGCTCGAACCTTTCGCCACCATTCTTTGCGCCATCGCCGCCTGCGGCATAGCGCG TATCGATCCCAACATTAATATCCCGGTAGTGATCCTCTCCTCGATCATTATTTTTATTCCCGGCTTAGCGTTAACCTTAG GTCTAGCCGAACTTGCCGCGCGGGATTTGATTTCCGGCACGGCGCGCATCATGGATGCGATTATGCAATTGTTTAAACTG TACTTTGGTGCAGTGCTCGGCATGGCGATTGGTAAAGCCGTGTTTGGCGAAGCGATTCATATCGAGCCAGAAGGGTTGCC GCGCTGGGCAATTTGGTCGGCGGTGCCGATTTTATCTATGGCATTAGTGTTTATCTTCAAGGCACGGATGCAAGATTCAC CTTGGGGCGTATTAGCTGGAATTGTGGCGTTTTTCTCGGCCATGCTCGGCGGACATTATTTTGGTGATTCGGTAGGCATT TTCTTTGGCGCCTTGGCCGTAGGGATTTACTCCAACCTCTTCGCCCGCTGGATGAAAGCTCCCGCCTCCATCGCCCTGTT GCAAGGCATAGTGATCTTAGTGCCCGGCAGTAAAACCTATATAGGACTCAATGCCTTAATCTCAGGTGAGACCATGCTCA ATCAGTCCCATATTGGCTCACAAATCTTTTTAATTTTTATGTCGCTGATCGCAGGATTGATTTTTGCCAACGTCGCCGTC CCGCCAAGGCGAACATTGTAA
Upstream 100 bases:
>100_bases TTATTTGTATTAAGGTTAAAAGCCGTTAACCTTTTATAGACAAGATAGGTTAATATGCGCGCGTTAATCCCTACAACTTT TTATACAGTGAAGACCCCGA
Downstream 100 bases:
>100_bases CAATTGTGAATTCGGCTGGAGCCCGCGCCCAGCCGTCACCTTAAGTTAACCTTAAGTAAAATCAGAAACTTATTAAAATG TTTTCTTGACTAACACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDNDEFIEKRRFIIKLGKALHKFGTPAYRLETHLQTVARTLGIEGYFLISPTSMTFVLQHDTDQEYNHAARVKPGELDLG SLARTDELVDELTSGKRTLAEALDRLEEIANKPNPYGPVLTCFSFGTSAAAFAMLMGTGWNDVFWSGLLGLFVYGLVYRA ERSARMAEVLEPFATILCAIAACGIARIDPNINIPVVILSSIIIFIPGLALTLGLAELAARDLISGTARIMDAIMQLFKL YFGAVLGMAIGKAVFGEAIHIEPEGLPRWAIWSAVPILSMALVFIFKARMQDSPWGVLAGIVAFFSAMLGGHYFGDSVGI FFGALAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNALISGETMLNQSHIGSQIFLIFMSLIAGLIFANVAV PPRRTL
Sequences:
>Translated_406_residues MDNDEFIEKRRFIIKLGKALHKFGTPAYRLETHLQTVARTLGIEGYFLISPTSMTFVLQHDTDQEYNHAARVKPGELDLG SLARTDELVDELTSGKRTLAEALDRLEEIANKPNPYGPVLTCFSFGTSAAAFAMLMGTGWNDVFWSGLLGLFVYGLVYRA ERSARMAEVLEPFATILCAIAACGIARIDPNINIPVVILSSIIIFIPGLALTLGLAELAARDLISGTARIMDAIMQLFKL YFGAVLGMAIGKAVFGEAIHIEPEGLPRWAIWSAVPILSMALVFIFKARMQDSPWGVLAGIVAFFSAMLGGHYFGDSVGI FFGALAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNALISGETMLNQSHIGSQIFLIFMSLIAGLIFANVAV PPRRTL >Mature_406_residues MDNDEFIEKRRFIIKLGKALHKFGTPAYRLETHLQTVARTLGIEGYFLISPTSMTFVLQHDTDQEYNHAARVKPGELDLG SLARTDELVDELTSGKRTLAEALDRLEEIANKPNPYGPVLTCFSFGTSAAAFAMLMGTGWNDVFWSGLLGLFVYGLVYRA ERSARMAEVLEPFATILCAIAACGIARIDPNINIPVVILSSIIIFIPGLALTLGLAELAARDLISGTARIMDAIMQLFKL YFGAVLGMAIGKAVFGEAIHIEPEGLPRWAIWSAVPILSMALVFIFKARMQDSPWGVLAGIVAFFSAMLGGHYFGDSVGI FFGALAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTYIGLNALISGETMLNQSHIGSQIFLIFMSLIAGLIFANVAV PPRRTL
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322353, Length=307, Percent_Identity=25.4071661237785, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44096; Mature: 44096
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNDEFIEKRRFIIKLGKALHKFGTPAYRLETHLQTVARTLGIEGYFLISPTSMTFVLQH CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEC DTDQEYNHAARVKPGELDLGSLARTDELVDELTSGKRTLAEALDRLEEIANKPNPYGPVL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHH TCFSFGTSAAAFAMLMGTGWNDVFWSGLLGLFVYGLVYRAERSARMAEVLEPFATILCAI HHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AACGIARIDPNINIPVVILSSIIIFIPGLALTLGLAELAARDLISGTARIMDAIMQLFKL HHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFGAVLGMAIGKAVFGEAIHIEPEGLPRWAIWSAVPILSMALVFIFKARMQDSPWGVLAG HHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IVAFFSAMLGGHYFGDSVGIFFGALAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTY HHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCE IGLNALISGETMLNQSHIGSQIFLIFMSLIAGLIFANVAVPPRRTL EEHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDNDEFIEKRRFIIKLGKALHKFGTPAYRLETHLQTVARTLGIEGYFLISPTSMTFVLQH CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEC DTDQEYNHAARVKPGELDLGSLARTDELVDELTSGKRTLAEALDRLEEIANKPNPYGPVL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHH TCFSFGTSAAAFAMLMGTGWNDVFWSGLLGLFVYGLVYRAERSARMAEVLEPFATILCAI HHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AACGIARIDPNINIPVVILSSIIIFIPGLALTLGLAELAARDLISGTARIMDAIMQLFKL HHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFGAVLGMAIGKAVFGEAIHIEPEGLPRWAIWSAVPILSMALVFIFKARMQDSPWGVLAG HHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IVAFFSAMLGGHYFGDSVGIFFGALAVGIYSNLFARWMKAPASIALLQGIVILVPGSKTY HHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCCE IGLNALISGETMLNQSHIGSQIFLIFMSLIAGLIFANVAVPPRRTL EEHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA