| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yciR [C]
Identifier: 160877248
GI number: 160877248
Start: 4908700
End: 4913226
Strand: Direct
Name: yciR [C]
Synonym: Sbal195_4145
Alternate gene names: 160877248
Gene position: 4908700-4913226 (Clockwise)
Preceding gene: 160877247
Following gene: 160877250
Centisome position: 91.8
GC content: 47.16
Gene sequence:
>4527_bases TTGGTAGGGGAAAATTTGAGTCAACTAATCCACAAGCTAGTGCTAGGCGCGCTTTGTATCCTAAGTTTGTGGGGGATCTC GTGCAATGGATTAGCGCAACCATTGAGCGCGGCTTTCACGCAGCTTAAATTTGAACATATTCGCAGTGAAGATGGTCTCA ACCAGAATACGATTACCAGCCTGTTTATGGACAGTGCTGGCATGTTGTGGATTGGTACTCAAGATGGTTTGCATGCCTAC AACGGTCATAACTTCACCATTTTTACCCACTCCCCCAACGATCCTAGCAGTATTTCAGAAAGTTATGTCTCTGACATTAT TCAAGATTCAGAAGGCTACATTTGGGTTTCCACGTTCAGCCAAGGGGTCAATCGACTCGATTTGAGCACTGGGACCTTTG AGCACTTTGGCCAAGAACAAGGTCTGACCGATCCCCGCACCACCAAACTCAGCATAGTGGGTAATACACTCTGGATTGGT ACTAAAGCAGGACTATTTTCCCTATCGACTAAAACCAAACGCATTACCCAGGTAAGTTTAGGTAATAGCGTCGAGCCCTA TATCACTAGCTTAGCCAATGTTGAAAACACTTACCTGCTGGCAGGTACCCAAGATAGCGGCACCTTTGCCGTCAGTGCAA ATACCATCACTCGCTTAAACGTGCCGCAAAATGTTACTGCCTATCAAATTAAAGCGAACTCAGCCTACTCGATCACTTTA GCCCTAGGTGGACAACTATGGCACTACAACTTGGCCTCGCAACAGGGCGAAATCCTCTGGCAGACTGACGATAACGTGCC TTACATTAAGGATTTTATCCAAACCGAACAGGGTGATTTTTGGGTCGTCGGGCCTGAAGCGGGTCTCATTCAACTCGAGA GAAACGATAAAACATTCACTGCGACCTATCATAGGTATGATTCTAAGCGCACTAACAGTATCAGTGAAAATAACATACTG AGTGTACTACAAGATCCCTTTGGCAACTTATGGCTAGGCGCCAGTTATTCGGGATTAGATAAAATTAATACCCGTCGCCA GTATTTTCAGCATATTTTCGAATACACCGCAGAGCTGTCGCAACAGAGCAACAATATTCGCACCTTATTCCGCAGCAAAG ATGATGCCCTCTGGATAGGCACTGAAGGCGCAGGGCTTAAGCGCATGTTAGCTAACGGTAAATATGAGCACTATACGGAG CGATTTGCTAACGCCTTAGGGGTGCATCAACGCAATTTAAACCTCACCCTGCGAGACATTGCCCAAGACAAAGCAGGCGT GCTCTGGTTTGCCACTAACTATGGACTTGGTCGGCTATCGCCAGAGGGCGATTTCCAATTACTCAAGGTCTCAGCAAGTA CAGACCAAGGCTCTGAAGCCAATTACATCCGAAGTTTAGAAATTGATGATCAAGGCCATCTCTGGGTCGCAACGACCCAC GCCCTCTATCGCAAGGCTATCGATAACGATGAATTTACTTTTATCTCATTGGCACATATTGATAATTTCCATCCGGCACA AAACCAGTTTTTAATCCTGAGAGTGCACAAAGATACGCTTTGGATAGGCACACTCGATGGCCTACTGAAACTGGATATGA AAACGGGCATAGGTAAATCTTACTTCCACCAATCCTCAGATAAAAAAAGTCTAATTAACAACCGTGTCCGCGATATTTTG GTGACTCAGGCGGGTGAGGTGTGGTTCGCCACCCATGGCGGGATCAGTAAGTTGCCCTCACAAGATGCCGATGCAGGCTT TACTCATTACACCCGCGAGCAGGGATTACCAAGCGATACCATTTACGCCTTACTTGAGGACCAAGAACATAATATTTGGT TTAGCAGCAATGCCGGCATAGGCAAACTTGACCCTAAAACCAATCGCGTCATCATATTCAACGAACAGGAAGGATTGCAG GCACTGGAGTTTAACGGCGGCGTAAAACTCCAGGACAGCGATGGTGATCTTTGGTTTGGTGGCATTAATGGCATCAATCG TTTCAATCCCCAGTCGATTCCAGATCAACGACCCGATGTTAAAGTCGCACTCACTGGCTATAGCATTGCGGGAAAAGGCC ATACGATTCTCGATTTAAGCCGCCCCCCTAGCATAGTGATGGACTATAGCGATCAGCTAATCAGTTTTGAGGTGACCTCA TTGGATTTCAGCTATAAGGGTAGAAACCGTTTCAGCTATTATCTCGAAGGGTTTGATAACAGATGGCATGAGCTACCCAC AGGCAATGAAATCACCTTCACTAACATCAATCCTGGCCATTACCGATTACATGTTCGTCATGGGCTGCAATATAACTCAG AAGGTGCCTATGCGCTGCTTGTCGATCTGAATGTGCAAGCCCCCTTCTATCGCTCTCAGTTCGCCTATGTACTTTACAGC TTACTGACTTTAGGGCTGCTGGCTTGGACTATTATCTGGCGTAGGAACAAACGCCAACAACAACGTGAATTTGAAACCAG TATCCGCGCCTCAGAGGAGCGGCTAAAGCTGGCACTTTGGGCGTCTGGCGATGGCATGTGGGACTGGAACATAGCCGAAA ACCAGGTCTATCGTACCAATATGGACTCTTCGATTCCCCATTGGAACAGCAGCAATATTGCCCATGAGAGCATGCACTCT GAAGACAGAGAGAGATTCAAACTTGAGCTAAACGAGCACCTTCAAGGCCGCTCGCCTTTCTTCGAAGCCGAGTACCGTGT CGAACGCTCACCGGGTAATTGGGTGTGGATTTTAGACCGTGGCAAAGTGGTTGAAAAAGATAGCCTAGATAACCCAATCC GCATGACAGGGACTAATCGTAATATCACCTCTCGTAAACTGATTGAGAACGAGCTGGTATTGTCCTCGCAAGTGCTCAAC AGCATGAATGAAGCGGTTGTCGTTGCGGGCCTAGATTATCGCATTCGCTCGGTTAACCCTGCCTTTTGTGCCATTACTGG CTACACAGAGCGCCAAATCACCGACAGGCATTTCATTCATTTAGCCTTTGGGCGCCAACAGCGTGAATTGTTCAATACCA TTGAACAACAGCTACTGCGCCATAAACATTGGGTCGGGGAGCTGTGGATCCGCAATAAACAACGACAGGCGATTTTAGTC TGGCTTGAGATCAACCAAGTTATCGATATTAAAGGTGAAACCAGTCACTTCGTCGCGGTATTTACCGATATCACACAGCG GAAAAAAGCCGAAGAAGATCTGCGTTTCCTCGCCAGTTTCGACACCTTAACGGGCCTGCCTAACCGGACCTTATTCCAAG ACAGGCTCAATCACGCGATTACCCAAGCGCATAGGGCGAACAATATCGTCGCTTTACTGTTTTTAGATCTCGACCGCTTT AAACATATCAACGACTCCATGGGGCACCATGTCGGCGATTTACTGCTCAAAGCAGTCGCCAGAAGACTGCAAAATGCGGT GCGCGATGGCGATACTGTCGCACGCCTAGGCGGTGATGAATTTACCATTATTTTAGAAGGGGTGGCGAAAACAAAAGCCG CTACTTTGATCTCAGAAAAAGTGCTCAGAGCATTCCAAACGCCCTTCTTATTGGACGATAAAACGCTAACCATTTCGACC TCCATCGGCATCAGTCTCTATCCAAACGATGCTGATAATGCCGACTCGCTGATTAAATTTGCCGATACTGCCATGTACCA CGCGAAATCCTCAGGTAGAAATAACTTCCAGTTTTATACTTCTAAGTTAAATGAAATTGCCACTCGCCATGTGCAACTCG AAAGTGGGTTAAAAGAGGCGATTCAGCGCAACGAGTTGAGCTTAGTTTATCAGCCTAAGTTCTGTTTAAAAGATGGCTCG CTGACTGGGATAGAAGCGCTTTTACGTTGGCATCACACTGAACTTGGCCCCATTTCCCCCGTCGAGTTTATTCCGCTGGC GGAAGAAACCGGCATCATCACCCAAATTGGCCATTGGGTGATCAATCAAGCTTGCCAGCAATTAGCCGAATGGAACAGCT TAGGATTCAACGGTATCACTGTCGCCGTTAACCTATCGGCTCGCCAACTTAAGGCCGATATTATCTCCACTATAGAAGTT GCCTTAGCGGTTTCAGGTCTCCCGGCACAATCCCTTGAGCTTGAACTGACAGAGTCGATGATCATGGGCAATCCGCAGGA GTCAGTCAGTATTCTATCTAAACTAAAGGCCCTAGGCTTGACCATAGCGGTGGATGATTTTGGGACGGGTTATTCGAGCC TAAGTTATCTCAAACGCTTCCCGATAGACACGCTGAAAATCGATCGAGAGTTCGTCAGAGACATCACCAATGATCCTGAC GATGCGGCCATCACCAGCGCCATTATTGCCCTCGCTCACAGCTTAGACCTGAACGTTGTCGCCGAAGGCGTAGAGACCCA AGAACAGCTAAACTTCTTGGCGATGCAGGGTTGCGATCAAGTACAAGGTTTCTTACTCAGTAAACCCTTAAGTGCCGCGG ATTTTTTAACTTTACTCAAGAATCAATCTAAGCCACAGCCGATTTGA
Upstream 100 bases:
>100_bases AAGTCAGCAATTTAAGCTAAAGTTTTTACAACAAAATGGCATTTAAGGTCTAGGCTAAGAACTAAACTAAATAGAAACCT AATCAGGATGGGTCCGTTTT
Downstream 100 bases:
>100_bases TTTGGTTTGATTTGAGGCGAAGCCTACAAATGTCATCGTCAAAAATAGCCAATAAAAAAGGCTCCTAGGAGCCTTTAATC ATCACCACAACATCCTTACT
Product: PAS/PAC and GAF sensor(s)-containing diguanylate cyclase/phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1508; Mature: 1508
Protein sequence:
>1508_residues MVGENLSQLIHKLVLGALCILSLWGISCNGLAQPLSAAFTQLKFEHIRSEDGLNQNTITSLFMDSAGMLWIGTQDGLHAY NGHNFTIFTHSPNDPSSISESYVSDIIQDSEGYIWVSTFSQGVNRLDLSTGTFEHFGQEQGLTDPRTTKLSIVGNTLWIG TKAGLFSLSTKTKRITQVSLGNSVEPYITSLANVENTYLLAGTQDSGTFAVSANTITRLNVPQNVTAYQIKANSAYSITL ALGGQLWHYNLASQQGEILWQTDDNVPYIKDFIQTEQGDFWVVGPEAGLIQLERNDKTFTATYHRYDSKRTNSISENNIL SVLQDPFGNLWLGASYSGLDKINTRRQYFQHIFEYTAELSQQSNNIRTLFRSKDDALWIGTEGAGLKRMLANGKYEHYTE RFANALGVHQRNLNLTLRDIAQDKAGVLWFATNYGLGRLSPEGDFQLLKVSASTDQGSEANYIRSLEIDDQGHLWVATTH ALYRKAIDNDEFTFISLAHIDNFHPAQNQFLILRVHKDTLWIGTLDGLLKLDMKTGIGKSYFHQSSDKKSLINNRVRDIL VTQAGEVWFATHGGISKLPSQDADAGFTHYTREQGLPSDTIYALLEDQEHNIWFSSNAGIGKLDPKTNRVIIFNEQEGLQ ALEFNGGVKLQDSDGDLWFGGINGINRFNPQSIPDQRPDVKVALTGYSIAGKGHTILDLSRPPSIVMDYSDQLISFEVTS LDFSYKGRNRFSYYLEGFDNRWHELPTGNEITFTNINPGHYRLHVRHGLQYNSEGAYALLVDLNVQAPFYRSQFAYVLYS LLTLGLLAWTIIWRRNKRQQQREFETSIRASEERLKLALWASGDGMWDWNIAENQVYRTNMDSSIPHWNSSNIAHESMHS EDRERFKLELNEHLQGRSPFFEAEYRVERSPGNWVWILDRGKVVEKDSLDNPIRMTGTNRNITSRKLIENELVLSSQVLN SMNEAVVVAGLDYRIRSVNPAFCAITGYTERQITDRHFIHLAFGRQQRELFNTIEQQLLRHKHWVGELWIRNKQRQAILV WLEINQVIDIKGETSHFVAVFTDITQRKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRF KHINDSMGHHVGDLLLKAVARRLQNAVRDGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLDDKTLTIST SIGISLYPNDADNADSLIKFADTAMYHAKSSGRNNFQFYTSKLNEIATRHVQLESGLKEAIQRNELSLVYQPKFCLKDGS LTGIEALLRWHHTELGPISPVEFIPLAEETGIITQIGHWVINQACQQLAEWNSLGFNGITVAVNLSARQLKADIISTIEV ALAVSGLPAQSLELELTESMIMGNPQESVSILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPD DAAITSAIIALAHSLDLNVVAEGVETQEQLNFLAMQGCDQVQGFLLSKPLSAADFLTLLKNQSKPQPI
Sequences:
>Translated_1508_residues MVGENLSQLIHKLVLGALCILSLWGISCNGLAQPLSAAFTQLKFEHIRSEDGLNQNTITSLFMDSAGMLWIGTQDGLHAY NGHNFTIFTHSPNDPSSISESYVSDIIQDSEGYIWVSTFSQGVNRLDLSTGTFEHFGQEQGLTDPRTTKLSIVGNTLWIG TKAGLFSLSTKTKRITQVSLGNSVEPYITSLANVENTYLLAGTQDSGTFAVSANTITRLNVPQNVTAYQIKANSAYSITL ALGGQLWHYNLASQQGEILWQTDDNVPYIKDFIQTEQGDFWVVGPEAGLIQLERNDKTFTATYHRYDSKRTNSISENNIL SVLQDPFGNLWLGASYSGLDKINTRRQYFQHIFEYTAELSQQSNNIRTLFRSKDDALWIGTEGAGLKRMLANGKYEHYTE RFANALGVHQRNLNLTLRDIAQDKAGVLWFATNYGLGRLSPEGDFQLLKVSASTDQGSEANYIRSLEIDDQGHLWVATTH ALYRKAIDNDEFTFISLAHIDNFHPAQNQFLILRVHKDTLWIGTLDGLLKLDMKTGIGKSYFHQSSDKKSLINNRVRDIL VTQAGEVWFATHGGISKLPSQDADAGFTHYTREQGLPSDTIYALLEDQEHNIWFSSNAGIGKLDPKTNRVIIFNEQEGLQ ALEFNGGVKLQDSDGDLWFGGINGINRFNPQSIPDQRPDVKVALTGYSIAGKGHTILDLSRPPSIVMDYSDQLISFEVTS LDFSYKGRNRFSYYLEGFDNRWHELPTGNEITFTNINPGHYRLHVRHGLQYNSEGAYALLVDLNVQAPFYRSQFAYVLYS LLTLGLLAWTIIWRRNKRQQQREFETSIRASEERLKLALWASGDGMWDWNIAENQVYRTNMDSSIPHWNSSNIAHESMHS EDRERFKLELNEHLQGRSPFFEAEYRVERSPGNWVWILDRGKVVEKDSLDNPIRMTGTNRNITSRKLIENELVLSSQVLN SMNEAVVVAGLDYRIRSVNPAFCAITGYTERQITDRHFIHLAFGRQQRELFNTIEQQLLRHKHWVGELWIRNKQRQAILV WLEINQVIDIKGETSHFVAVFTDITQRKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRF KHINDSMGHHVGDLLLKAVARRLQNAVRDGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLDDKTLTIST SIGISLYPNDADNADSLIKFADTAMYHAKSSGRNNFQFYTSKLNEIATRHVQLESGLKEAIQRNELSLVYQPKFCLKDGS LTGIEALLRWHHTELGPISPVEFIPLAEETGIITQIGHWVINQACQQLAEWNSLGFNGITVAVNLSARQLKADIISTIEV ALAVSGLPAQSLELELTESMIMGNPQESVSILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPD DAAITSAIIALAHSLDLNVVAEGVETQEQLNFLAMQGCDQVQGFLLSKPLSAADFLTLLKNQSKPQPI >Mature_1508_residues MVGENLSQLIHKLVLGALCILSLWGISCNGLAQPLSAAFTQLKFEHIRSEDGLNQNTITSLFMDSAGMLWIGTQDGLHAY NGHNFTIFTHSPNDPSSISESYVSDIIQDSEGYIWVSTFSQGVNRLDLSTGTFEHFGQEQGLTDPRTTKLSIVGNTLWIG TKAGLFSLSTKTKRITQVSLGNSVEPYITSLANVENTYLLAGTQDSGTFAVSANTITRLNVPQNVTAYQIKANSAYSITL ALGGQLWHYNLASQQGEILWQTDDNVPYIKDFIQTEQGDFWVVGPEAGLIQLERNDKTFTATYHRYDSKRTNSISENNIL SVLQDPFGNLWLGASYSGLDKINTRRQYFQHIFEYTAELSQQSNNIRTLFRSKDDALWIGTEGAGLKRMLANGKYEHYTE RFANALGVHQRNLNLTLRDIAQDKAGVLWFATNYGLGRLSPEGDFQLLKVSASTDQGSEANYIRSLEIDDQGHLWVATTH ALYRKAIDNDEFTFISLAHIDNFHPAQNQFLILRVHKDTLWIGTLDGLLKLDMKTGIGKSYFHQSSDKKSLINNRVRDIL VTQAGEVWFATHGGISKLPSQDADAGFTHYTREQGLPSDTIYALLEDQEHNIWFSSNAGIGKLDPKTNRVIIFNEQEGLQ ALEFNGGVKLQDSDGDLWFGGINGINRFNPQSIPDQRPDVKVALTGYSIAGKGHTILDLSRPPSIVMDYSDQLISFEVTS LDFSYKGRNRFSYYLEGFDNRWHELPTGNEITFTNINPGHYRLHVRHGLQYNSEGAYALLVDLNVQAPFYRSQFAYVLYS LLTLGLLAWTIIWRRNKRQQQREFETSIRASEERLKLALWASGDGMWDWNIAENQVYRTNMDSSIPHWNSSNIAHESMHS EDRERFKLELNEHLQGRSPFFEAEYRVERSPGNWVWILDRGKVVEKDSLDNPIRMTGTNRNITSRKLIENELVLSSQVLN SMNEAVVVAGLDYRIRSVNPAFCAITGYTERQITDRHFIHLAFGRQQRELFNTIEQQLLRHKHWVGELWIRNKQRQAILV WLEINQVIDIKGETSHFVAVFTDITQRKKAEEDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRF KHINDSMGHHVGDLLLKAVARRLQNAVRDGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLDDKTLTIST SIGISLYPNDADNADSLIKFADTAMYHAKSSGRNNFQFYTSKLNEIATRHVQLESGLKEAIQRNELSLVYQPKFCLKDGS LTGIEALLRWHHTELGPISPVEFIPLAEETGIITQIGHWVINQACQQLAEWNSLGFNGITVAVNLSARQLKADIISTIEV ALAVSGLPAQSLELELTESMIMGNPQESVSILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPD DAAITSAIIALAHSLDLNVVAEGVETQEQLNFLAMQGCDQVQGFLLSKPLSAADFLTLLKNQSKPQPI
Specific function: Unknown
COG id: COG5001
COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MHYT domain [H]
Homologues:
Organism=Escherichia coli, GI1787541, Length=549, Percent_Identity=35.8834244080146, Blast_Score=339, Evalue=7e-94, Organism=Escherichia coli, GI87081921, Length=454, Percent_Identity=35.6828193832599, Blast_Score=275, Evalue=2e-74, Organism=Escherichia coli, GI226510982, Length=429, Percent_Identity=29.6037296037296, Blast_Score=194, Evalue=3e-50, Organism=Escherichia coli, GI1788381, Length=705, Percent_Identity=25.531914893617, Blast_Score=157, Evalue=6e-39, Organism=Escherichia coli, GI1788502, Length=260, Percent_Identity=33.8461538461538, Blast_Score=149, Evalue=2e-36, Organism=Escherichia coli, GI1786507, Length=269, Percent_Identity=33.457249070632, Blast_Score=148, Evalue=2e-36, Organism=Escherichia coli, GI87081845, Length=256, Percent_Identity=35.9375, Blast_Score=147, Evalue=6e-36, Organism=Escherichia coli, GI1790496, Length=241, Percent_Identity=36.0995850622407, Blast_Score=147, Evalue=7e-36, Organism=Escherichia coli, GI87081743, Length=248, Percent_Identity=36.2903225806452, Blast_Score=135, Evalue=2e-32, Organism=Escherichia coli, GI1787055, Length=253, Percent_Identity=32.4110671936759, Blast_Score=125, Evalue=2e-29, Organism=Escherichia coli, GI87081980, Length=248, Percent_Identity=33.8709677419355, Blast_Score=124, Evalue=4e-29, Organism=Escherichia coli, GI1788849, Length=247, Percent_Identity=34.412955465587, Blast_Score=117, Evalue=5e-27, Organism=Escherichia coli, GI87082096, Length=418, Percent_Identity=24.8803827751196, Blast_Score=108, Evalue=4e-24, Organism=Escherichia coli, GI1786584, Length=170, Percent_Identity=32.9411764705882, Blast_Score=100, Evalue=9e-22, Organism=Escherichia coli, GI87081881, Length=192, Percent_Identity=35.4166666666667, Blast_Score=98, Evalue=4e-21, Organism=Escherichia coli, GI145693134, Length=203, Percent_Identity=30.0492610837438, Blast_Score=95, Evalue=3e-20, Organism=Escherichia coli, GI1787816, Length=174, Percent_Identity=36.2068965517241, Blast_Score=93, Evalue=1e-19, Organism=Escherichia coli, GI1787802, Length=163, Percent_Identity=34.3558282208589, Blast_Score=91, Evalue=7e-19, Organism=Escherichia coli, GI87081977, Length=167, Percent_Identity=34.1317365269461, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI87082007, Length=168, Percent_Identity=35.1190476190476, Blast_Score=85, Evalue=4e-17, Organism=Escherichia coli, GI1787262, Length=204, Percent_Identity=29.9019607843137, Blast_Score=84, Evalue=8e-17, Organism=Escherichia coli, GI1788956, Length=150, Percent_Identity=38, Blast_Score=83, Evalue=1e-16, Organism=Escherichia coli, GI1787410, Length=150, Percent_Identity=31.3333333333333, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI87081974, Length=106, Percent_Identity=34.9056603773585, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1787056, Length=123, Percent_Identity=34.1463414634146, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1789650, Length=438, Percent_Identity=20.0913242009132, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR005330 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]
EC number: NA
Molecular weight: Translated: 169641; Mature: 169641
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50883 EAL ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGENLSQLIHKLVLGALCILSLWGISCNGLAQPLSAAFTQLKFEHIRSEDGLNQNTITS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LFMDSAGMLWIGTQDGLHAYNGHNFTIFTHSPNDPSSISESYVSDIIQDSEGYIWVSTFS HHHCCCCEEEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHH QGVNRLDLSTGTFEHFGQEQGLTDPRTTKLSIVGNTLWIGTKAGLFSLSTKTKRITQVSL CCCCEEECCCCCHHHHCCCCCCCCCCCEEEEEEECEEEEECCCCEEEECCCCCEEEEEEC GNSVEPYITSLANVENTYLLAGTQDSGTFAVSANTITRLNVPQNVTAYQIKANSAYSITL CCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECEEEEECCCCCCEEEEEECCCEEEEEE ALGGQLWHYNLASQQGEILWQTDDNVPYIKDFIQTEQGDFWVVGPEAGLIQLERNDKTFT EECCEEEEEECCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCEEE ATYHRYDSKRTNSISENNILSVLQDPFGNLWLGASYSGLDKINTRRQYFQHIFEYTAELS EEEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH QQSNNIRTLFRSKDDALWIGTEGAGLKRMLANGKYEHYTERFANALGVHQRNLNLTLRDI HCCCCHHHHEECCCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCEECCCCEEEHHH AQDKAGVLWFATNYGLGRLSPEGDFQLLKVSASTDQGSEANYIRSLEIDDQGHLWVATTH CCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHH ALYRKAIDNDEFTFISLAHIDNFHPAQNQFLILRVHKDTLWIGTLDGLLKLDMKTGIGKS HHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEHHCCCCHH YFHQSSDKKSLINNRVRDILVTQAGEVWFATHGGISKLPSQDADAGFTHYTREQGLPSDT HHHCCCCHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCHH IYALLEDQEHNIWFSSNAGIGKLDPKTNRVIIFNEQEGLQALEFNGGVKLQDSDGDLWFG EEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCEEEE GINGINRFNPQSIPDQRPDVKVALTGYSIAGKGHTILDLSRPPSIVMDYSDQLISFEVTS CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEECCCCCEEEEEEEE LDFSYKGRNRFSYYLEGFDNRWHELPTGNEITFTNINPGHYRLHVRHGLQYNSEGAYALL EEEEECCCCCEEEEEECCCCHHHCCCCCCEEEEEECCCCEEEEEEEECCEECCCCCEEEE VDLNVQAPFYRSQFAYVLYSLLTLGLLAWTIIWRRNKRQQQREFETSIRASEERLKLALW EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEE ASGDGMWDWNIAENQVYRTNMDSSIPHWNSSNIAHESMHSEDRERFKLELNEHLQGRSPF ECCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHEEEHHHCCCCCCCC FEAEYRVERSPGNWVWILDRGKVVEKDSLDNPIRMTGTNRNITSRKLIENELVLSSQVLN EEEEEEEEECCCCEEEEEECCCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH SMNEAVVVAGLDYRIRSVNPAFCAITGYTERQITDRHFIHLAFGRQQRELFNTIEQQLLR CCCCEEEEEECCEEEECCCCCEEEEECCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHH HKHWVGELWIRNKQRQAILVWLEINQVIDIKGETSHFVAVFTDITQRKKAEEDLRFLASF HHHHHHHHEECCCCCEEEEEEEEECEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHH DTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAVA HHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH RRLQNAVRDGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLDDKTLTIST HHHHHHHHCCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEE SIGISLYPNDADNADSLIKFADTAMYHAKSSGRNNFQFYTSKLNEIATRHVQLESGLKEA ECEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IQRNELSLVYQPKFCLKDGSLTGIEALLRWHHTELGPISPVEFIPLAEETGIITQIGHWV HHCCCEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH INQACQQLAEWNSLGFNGITVAVNLSARQLKADIISTIEVALAVSGLPAQSLELELTESM HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEHHHH IMGNPQESVSILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPD HCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHCHHHHHHHCCCCC DAAITSAIIALAHSLDLNVVAEGVETQEQLNFLAMQGCDQVQGFLLSKPLSAADFLTLLK HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH NQSKPQPI CCCCCCCC >Mature Secondary Structure MVGENLSQLIHKLVLGALCILSLWGISCNGLAQPLSAAFTQLKFEHIRSEDGLNQNTITS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LFMDSAGMLWIGTQDGLHAYNGHNFTIFTHSPNDPSSISESYVSDIIQDSEGYIWVSTFS HHHCCCCEEEEECCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEHH QGVNRLDLSTGTFEHFGQEQGLTDPRTTKLSIVGNTLWIGTKAGLFSLSTKTKRITQVSL CCCCEEECCCCCHHHHCCCCCCCCCCCEEEEEEECEEEEECCCCEEEECCCCCEEEEEEC GNSVEPYITSLANVENTYLLAGTQDSGTFAVSANTITRLNVPQNVTAYQIKANSAYSITL CCCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECEEEEECCCCCCEEEEEECCCEEEEEE ALGGQLWHYNLASQQGEILWQTDDNVPYIKDFIQTEQGDFWVVGPEAGLIQLERNDKTFT EECCEEEEEECCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCEEE ATYHRYDSKRTNSISENNILSVLQDPFGNLWLGASYSGLDKINTRRQYFQHIFEYTAELS EEEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH QQSNNIRTLFRSKDDALWIGTEGAGLKRMLANGKYEHYTERFANALGVHQRNLNLTLRDI HCCCCHHHHEECCCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCEECCCCEEEHHH AQDKAGVLWFATNYGLGRLSPEGDFQLLKVSASTDQGSEANYIRSLEIDDQGHLWVATTH CCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEHH ALYRKAIDNDEFTFISLAHIDNFHPAQNQFLILRVHKDTLWIGTLDGLLKLDMKTGIGKS HHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEHHCCCCHH YFHQSSDKKSLINNRVRDILVTQAGEVWFATHGGISKLPSQDADAGFTHYTREQGLPSDT HHHCCCCHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCHH IYALLEDQEHNIWFSSNAGIGKLDPKTNRVIIFNEQEGLQALEFNGGVKLQDSDGDLWFG EEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCEEEE GINGINRFNPQSIPDQRPDVKVALTGYSIAGKGHTILDLSRPPSIVMDYSDQLISFEVTS CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCCEEECCCCCEEEEEEEE LDFSYKGRNRFSYYLEGFDNRWHELPTGNEITFTNINPGHYRLHVRHGLQYNSEGAYALL EEEEECCCCCEEEEEECCCCHHHCCCCCCEEEEEECCCCEEEEEEEECCEECCCCCEEEE VDLNVQAPFYRSQFAYVLYSLLTLGLLAWTIIWRRNKRQQQREFETSIRASEERLKLALW EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEE ASGDGMWDWNIAENQVYRTNMDSSIPHWNSSNIAHESMHSEDRERFKLELNEHLQGRSPF ECCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHEEEHHHCCCCCCCC FEAEYRVERSPGNWVWILDRGKVVEKDSLDNPIRMTGTNRNITSRKLIENELVLSSQVLN EEEEEEEEECCCCEEEEEECCCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH SMNEAVVVAGLDYRIRSVNPAFCAITGYTERQITDRHFIHLAFGRQQRELFNTIEQQLLR CCCCEEEEEECCEEEECCCCCEEEEECCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHH HKHWVGELWIRNKQRQAILVWLEINQVIDIKGETSHFVAVFTDITQRKKAEEDLRFLASF HHHHHHHHEECCCCCEEEEEEEEECEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHH DTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHINDSMGHHVGDLLLKAVA HHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH RRLQNAVRDGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQTPFLLDDKTLTIST HHHHHHHHCCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEE SIGISLYPNDADNADSLIKFADTAMYHAKSSGRNNFQFYTSKLNEIATRHVQLESGLKEA ECEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IQRNELSLVYQPKFCLKDGSLTGIEALLRWHHTELGPISPVEFIPLAEETGIITQIGHWV HHCCCEEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH INQACQQLAEWNSLGFNGITVAVNLSARQLKADIISTIEVALAVSGLPAQSLELELTESM HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEHHHH IMGNPQESVSILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPD HCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHCHHHHHHHCCCCC DAAITSAIIALAHSLDLNVVAEGVETQEQLNFLAMQGCDQVQGFLLSKPLSAADFLTLLK HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH NQSKPQPI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]