| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is aprE [H]
Identifier: 160877204
GI number: 160877204
Start: 4854201
End: 4855583
Strand: Direct
Name: aprE [H]
Synonym: Sbal195_4100
Alternate gene names: 160877204
Gene position: 4854201-4855583 (Clockwise)
Preceding gene: 160877203
Following gene: 160877205
Centisome position: 90.78
GC content: 45.41
Gene sequence:
>1383_bases ATGAGTAAAAATTTAACCGCAAATGACTTAGACATGGTTGATGATGTCTACGGCGCCATGATGACGGACGCTCCCAGCGG ACACAGGTTAATCATATGGGCACTTGCAGCTATGGTTGTGTGTTTTTTACTGTGGGCAGGTTTTGCTAAATTAGACAAGG TCACCACTGGGACAGGTAAAGTCATCCCCTCATCACAAGTCCAAGTCATCCAGAGTTTAGATGGCGGCATAATGCAAGAG CTCTACGTTCAGGAAGGTGAAATGGTGACTAAAGGGCAACCTTTAGTGCGTATTGATGATACCCGCTTCCGCTCCGACTA TGCTCAACAAGAGCAAGAAGTTTTTGGCTTAAAAACCAATGCTATTCGTATGCGCGCCGAACTCGACAGCATTCTCATAT CAGACATGACTTCTGACTGGCGCGAGCAAGTACTCATTACTAAAAAAGCATTGGTATTCCCGGAGAATATTATTGCAGCG GAACCGGCATTAGTTAAAAGACAACAAGAGGAATACAACGGACGCTTAGATAACTTAAGTAACCAGCTTGAAATCCTGGT CCGTCAAATTCAACAAAGACAACAAGAAATTGATGATCTCGCGTCTAAAACAACGACATTAACCACCAGTATGCAGCTGA TCTCCCGTGAGCTTGAACTCACTCGGCCTTTAGCTAAAAAAGGTATCGTGCCTGAAGTTGAACTGCTCAAGCTCGAACGC ACAGTGAACGATTTGCAAGGCGAATTGAATTCAATGCGCCTACTGCGCCCGAAAGTCAAAGCGGCGATGGATGAAGCCAT CTTAAAACGCCGTGAAGCCGTATTCGTTTATGCCGCCGATCTACGCGCACAGCTTAATGAAACCCAAACCCGCCTGTCTC GCATGAATGAAGCACAAGTGGGCGCACAGGATAAAGTCAGCAAAGCCATTATCACCTCACCAGTCAATGGCACCATTAAA ACCACTCACATCAATACACTAGGCGGCGTTGTGCAACCTGGAGTCGATATTATCGAGATAGTGCCATCGGAAGATCAGTT ACTGATTGAAACCAAAATCTTGCCTAAAGATATCGCCTTCTTACACCCAGGATTACCCGCAGTGGTAAAGATTACCGCCT ATGACTTTACTCGCTATGGCGGCCTTAAAGGGACAGTTGAACATATCAGTGCCGACACATCCCAAGATGAAGAAGGCAAT AGCTATTATCTCATTCGAGTCAGAACCGCAGAATCCAGTTTAACCAAAAACGATGGCACACAGATGCCAATTATCCCGGG AATGTTAACTTCGGTTGACGTTATCACGGGGCAAAGATCCATACTTGAGTACATTTTAAATCCAATTTTAAGGGCTAAGG ACACAGCGCTAAGAGAGCACTAA
Upstream 100 bases:
>100_bases GTATTATCGTACTCGAGCGCGGCCATGTGGTCGCCGATGGTCCCAAGGCAGAAGTGTTAGAAAAACTCAATTTTGGCCTC GTGAATGGAGAAGCTAAAAG
Downstream 100 bases:
>100_bases GCCTTTTTTTATAAACCGGGAGGTTGGTCATGAAGACTTCAGCAAGACGACAATTTCAATGTTCAAAGATAGCCATAGTG CTGTCATTGATCCTGTTACC
Product: HlyD family type I secretion membrane fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSKNLTANDLDMVDDVYGAMMTDAPSGHRLIIWALAAMVVCFLLWAGFAKLDKVTTGTGKVIPSSQVQVIQSLDGGIMQE LYVQEGEMVTKGQPLVRIDDTRFRSDYAQQEQEVFGLKTNAIRMRAELDSILISDMTSDWREQVLITKKALVFPENIIAA EPALVKRQQEEYNGRLDNLSNQLEILVRQIQQRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLER TVNDLQGELNSMRLLRPKVKAAMDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAIITSPVNGTIK TTHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHPGLPAVVKITAYDFTRYGGLKGTVEHISADTSQDEEGN SYYLIRVRTAESSLTKNDGTQMPIIPGMLTSVDVITGQRSILEYILNPILRAKDTALREH
Sequences:
>Translated_460_residues MSKNLTANDLDMVDDVYGAMMTDAPSGHRLIIWALAAMVVCFLLWAGFAKLDKVTTGTGKVIPSSQVQVIQSLDGGIMQE LYVQEGEMVTKGQPLVRIDDTRFRSDYAQQEQEVFGLKTNAIRMRAELDSILISDMTSDWREQVLITKKALVFPENIIAA EPALVKRQQEEYNGRLDNLSNQLEILVRQIQQRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLER TVNDLQGELNSMRLLRPKVKAAMDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAIITSPVNGTIK TTHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHPGLPAVVKITAYDFTRYGGLKGTVEHISADTSQDEEGN SYYLIRVRTAESSLTKNDGTQMPIIPGMLTSVDVITGQRSILEYILNPILRAKDTALREH >Mature_459_residues SKNLTANDLDMVDDVYGAMMTDAPSGHRLIIWALAAMVVCFLLWAGFAKLDKVTTGTGKVIPSSQVQVIQSLDGGIMQEL YVQEGEMVTKGQPLVRIDDTRFRSDYAQQEQEVFGLKTNAIRMRAELDSILISDMTSDWREQVLITKKALVFPENIIAAE PALVKRQQEEYNGRLDNLSNQLEILVRQIQQRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERT VNDLQGELNSMRLLRPKVKAAMDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAIITSPVNGTIKT THINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHPGLPAVVKITAYDFTRYGGLKGTVEHISADTSQDEEGNS YYLIRVRTAESSLTKNDGTQMPIIPGMLTSVDVITGQRSILEYILNPILRAKDTALREH
Specific function: Involved in the secretion of alkaline protease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 51270; Mature: 51139
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNLTANDLDMVDDVYGAMMTDAPSGHRLIIWALAAMVVCFLLWAGFAKLDKVTTGTGK CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCC VIPSSQVQVIQSLDGGIMQELYVQEGEMVTKGQPLVRIDDTRFRSDYAQQEQEVFGLKTN CCCCHHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCHH AIRMRAELDSILISDMTSDWREQVLITKKALVFPENIIAAEPALVKRQQEEYNGRLDNLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCHHHHH NQLEILVRQIQQRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TVNDLQGELNSMRLLRPKVKAAMDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHHHHHHC GAQDKVSKAIITSPVNGTIKTTHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAF CCHHHHHHHHEECCCCCCEEEEEEHHHCCHHCCCCCEEEEECCCCCEEEEEECCCHHHHH LHPGLPAVVKITAYDFTRYGGLKGTVEHISADTSQDEEGNSYYLIRVRTAESSLTKNDGT HCCCCCCEEEEEEEHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC QMPIIPGMLTSVDVITGQRSILEYILNPILRAKDTALREH CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKNLTANDLDMVDDVYGAMMTDAPSGHRLIIWALAAMVVCFLLWAGFAKLDKVTTGTGK CCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCC VIPSSQVQVIQSLDGGIMQELYVQEGEMVTKGQPLVRIDDTRFRSDYAQQEQEVFGLKTN CCCCHHHHHHHHHCCHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHCCCHH AIRMRAELDSILISDMTSDWREQVLITKKALVFPENIIAAEPALVKRQQEEYNGRLDNLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCHHHHH NQLEILVRQIQQRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TVNDLQGELNSMRLLRPKVKAAMDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHHHHHHHHC GAQDKVSKAIITSPVNGTIKTTHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAF CCHHHHHHHHEECCCCCCEEEEEEHHHCCHHCCCCCEEEEECCCCCEEEEEECCCHHHHH LHPGLPAVVKITAYDFTRYGGLKGTVEHISADTSQDEEGNSYYLIRVRTAESSLTKNDGT HCCCCCCEEEEEEEHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC QMPIIPGMLTSVDVITGQRSILEYILNPILRAKDTALREH CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]