| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is bcsP31 [H]
Identifier: 160877128
GI number: 160877128
Start: 4733888
End: 4734844
Strand: Direct
Name: bcsP31 [H]
Synonym: Sbal195_4024
Alternate gene names: 160877128
Gene position: 4733888-4734844 (Clockwise)
Preceding gene: 160877127
Following gene: 160877129
Centisome position: 88.53
GC content: 48.69
Gene sequence:
>957_bases ATGAAAATCAAAAAACGTTTTGTCGCCGTAGGCGCTGCCGTGACACTCACACTCAGTGCCGCCGCTATGGCCGCCGCCCC CGCTTTTATTAACATACTCACGGGTGGCACCAGTGGCGTGTATTACCCTATTGGTGTAGCCCTATCGCAACTCTATGGCA CAGGAATCGAAGGTTCTAAAACCTCAGTTCAAGCGACGAAAGCCTCGGTAGAAAACCTCAATCTACTGCAAGCGGGCCGT GGCGAATTAGCGCTCGCGCTAGGTGACTCAGTCGCAGCCGCTTACCAAGGTGATATTGATGCGGGCTTTAAAACGCCGTT GGATAAAATCCGTGTGCTCGCCTCTGCTTACCCTAACTATATTCAAATTGTTGCCAATAAAGAGTCTGGCATTAAAACCT TGGCCGATTTAAAAGGGAAACGTATCTCTGTCGGCGCACCTAAATCGGGTACCGAGCTCAATGCCAGATCAATTTTTAAG GCGGCTGGTTTAAGCTACGAAGACATGGGTAAGGTCGAGTTTTTACCTTATGCAGAATCCGTTGAACTCATCAAAAATCG TCAGTTAGATGCGACCTTGCAGTCGTCTGGTCTCGGTATGGCAGCCATCCGCGATTTAGCGGCGACTATGGCAATCAACT TTGTTGAAATTCCAGAGGATGTGATTGCTAAGATTAACAACCCTGCCTATCAACACGGCGTGATCCCAGCATCGACCTAT GAAGGCCAAACCACTGACGTTTCAACCGTTGCCATTCAAAACCTGCTGGTAACGCAAAGCGGCGTGTCGGACGATTTAGC CTATCAAATGACTAAGATCATGTTCGAGCACTTAGATCGTCTAGGTAACGCGCACTCAGCCGCTAAATCTATTAGCTTAG AGAAAGCGACGAAAAATCTGCCGATACCGCTACACCCAGGTGCAGAGCGTTATTACAAAGAAGTTGGCGCACTCTAA
Upstream 100 bases:
>100_bases TTGACCTTTTTCAGGTTTTATGTAGTTATATTCAGCAGGCTAAGGTATTCCAAGCTCGAAAGACCCTACATAACATTATA AAAAATAAGGATATTTCACA
Downstream 100 bases:
>100_bases GTTTTGCTGATATCTGTGCACCCTATTCCAAACTAAGCGATCGAGATGCCGTTGAATAACGGCATCTTTTATATTCAAAC AGCCTCAAACGGTAGAATTC
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSKTSVQATKASVENLNLLQAGR GELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNYIQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFK AAGLSYEDMGKVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNLPIPLHPGAERYYKEVGAL
Sequences:
>Translated_318_residues MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSKTSVQATKASVENLNLLQAGR GELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNYIQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFK AAGLSYEDMGKVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNLPIPLHPGAERYYKEVGAL >Mature_318_residues MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSKTSVQATKASVENLNLLQAGR GELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNYIQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFK AAGLSYEDMGKVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNLPIPLHPGAERYYKEVGAL
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 33522; Mature: 33522
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSK CCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEHHHHHHHHHHCCCCCCCC TSVQATKASVENLNLLQAGRGELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNY CHHHHHHHHHHHCHHEECCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE IQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFKAAGLSYEDMGKVEFLPYAES EEEEECCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCEEEECCHHH VELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY HHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCCCCC EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNL CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PIPLHPGAERYYKEVGAL CCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSK CCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEHHHHHHHHHHCCCCCCCC TSVQATKASVENLNLLQAGRGELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNY CHHHHHHHHHHHCHHEECCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE IQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFKAAGLSYEDMGKVEFLPYAES EEEEECCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCEEEECCHHH VELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY HHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCCCCC EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNL CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC PIPLHPGAERYYKEVGAL CCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]