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The map label for this gene is ubiD [H]

Identifier: 160877089

GI number: 160877089

Start: 4689454

End: 4690935

Strand: Direct

Name: ubiD [H]

Synonym: Sbal195_3985

Alternate gene names: 160877089

Gene position: 4689454-4690935 (Clockwise)

Preceding gene: 160877086

Following gene: 160877090

Centisome position: 87.7

GC content: 50.34

Gene sequence:

>1482_bases
ATGAGTTTTAAGGATTTACGCAGCTTTATTGATCATCTGGAAGCCAATGGCGAACTCAAACGCATTAGCTACCCAGTTGA
TCCTCATTTAGAAATGACAGAGATCGCCGATCGCGTATTACGCGCTAAGGGCCCTGCGCTATTATTTGAAAATCCCAAAG
ATCATCACATGCCCGTGTTGGTAAACCTGTTCGGTACGCCAAAACGTGTGGCCATGGCGCTCGGTAAAGACGATCCCTTA
GCGTTGCGAGAAGTGGGCGAACTGTTAGCCTTTTTAAAAGAACCCGAACCACCACGGGGCTTTAAAGACGCGATCGCTAA
GATCCCTATGTTCAAGCAAGCCTTGAATATGCCGCCAAAGACAGTGCGCAATCCCCCTTGCCAACAAGTGATCAAAACCG
GCGATGAAGTCGATTTGACCCAATTACCTATTCAGCATTGCTGGCCGGGCGATGTCGCACCACTGGTGACATGGGGCTTA
ACCATCACCAAAGGCCCGCGCAAGAGTCGTCAGAATTTAGGTATTTATCGCCAACAATTACTGGGTAAAAACAAGCTGAT
CATGCGTTGGTTATCCCACCGTGGCGGCGCGTTAGACTTTGCTGATTTTAAACAACAATTCCCCGGTGAGCGTTATCCTG
TTGTCGTCGCACTCGGCGCCGATCCTGTGACTATTTTAGGTGCCGTCACCCCAGTCCCCGATTCCATGAGCGAATACGCT
TTTGCCGGTTTACTGCGCGGTGAACGTACCGAAGTCTGCAAGGCGTTAAGCTGCGACTTAGAAGTGCCCGCCACCAGTGA
AATCATCCTCGAAGGTTATATCGATCCAGAGGAACTGGCGGAAGAAGGCCCCTACGGCGATCACACGGGTTACTACAACG
AAACCGATAAGTTTCCAGTATTTACCGTTACCCACATCACTCACCGTAAAGATGCCATCTACCACAGCACTTACACTGGC
CGTCCACCGGATGAGCCCGCCATGCTGGGAGTTGCATTAAACGAAGTGTTTGTGCCGATTTTGCGTAAGCAATATCCTGA
GATCGTTGATTTTTATCTGCCGCCTGAGGGTTGTTCGTACCGCATGGCAGTGATCTCTATTCGCAAACAATATCCGGGAC
ACGCCAAACGGGTGATGATGGGCGCTTGGTCTTTCCTGCGCCAATTTATGTACACCAAGTTTATTGTCATCGTCGATGAA
GATGTGAACTGCCGTGACTGGCAGGATGTGATCTGGGCGATCACCACCCGCATGGACCCAAAACGCGATACTGTGATGAT
CGAAAACACCCCGATCGACTACCTCGATTTTGCCTCACCCGTCGCGGGCTTAGGCTCAAAAATGGGACTCGATGCCACCA
ATAAGTGGGAAGGCGAAACCAACCGCGAATGGGGCACGCCAATCGTGATGGATCCAAAAGTAAAACAAAAGATCGACTCA
ATCTGGGATGAGTTAGGCATAGACGACAGCCCAACCCTATAA

Upstream 100 bases:

>100_bases
ACGCTTCCTAAGCTTGAAGATCACTGAATTGGTTAACCCTAAAACAGAAAAATGCTATAGTGCGCGCCACACGGATTTTC
ATTGCAGAGGCTATTTCCAC

Downstream 100 bases:

>100_bases
TTCAGCTTAAGCCGTTATTCAAATACCGGCTTAAGCCAAGAGAATAGGCCAATAACAGGCCGCTAAAGCGACACCTAGAC
ACATAATGTTGAAGAAAGGT

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAKGPALLFENPKDHHMPVLVNLFGTPKRVAMALGKDDPL
ALREVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPKTVRNPPCQQVIKTGDEVDLTQLPIQHCWPGDVAPLVTWGL
TITKGPRKSRQNLGIYRQQLLGKNKLIMRWLSHRGGALDFADFKQQFPGERYPVVVALGADPVTILGAVTPVPDSMSEYA
FAGLLRGERTEVCKALSCDLEVPATSEIILEGYIDPEELAEEGPYGDHTGYYNETDKFPVFTVTHITHRKDAIYHSTYTG
RPPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVIVDE
DVNCRDWQDVIWAITTRMDPKRDTVMIENTPIDYLDFASPVAGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDS
IWDELGIDDSPTL

Sequences:

>Translated_493_residues
MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAKGPALLFENPKDHHMPVLVNLFGTPKRVAMALGKDDPL
ALREVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPKTVRNPPCQQVIKTGDEVDLTQLPIQHCWPGDVAPLVTWGL
TITKGPRKSRQNLGIYRQQLLGKNKLIMRWLSHRGGALDFADFKQQFPGERYPVVVALGADPVTILGAVTPVPDSMSEYA
FAGLLRGERTEVCKALSCDLEVPATSEIILEGYIDPEELAEEGPYGDHTGYYNETDKFPVFTVTHITHRKDAIYHSTYTG
RPPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVIVDE
DVNCRDWQDVIWAITTRMDPKRDTVMIENTPIDYLDFASPVAGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDS
IWDELGIDDSPTL
>Mature_492_residues
SFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAKGPALLFENPKDHHMPVLVNLFGTPKRVAMALGKDDPLA
LREVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPKTVRNPPCQQVIKTGDEVDLTQLPIQHCWPGDVAPLVTWGLT
ITKGPRKSRQNLGIYRQQLLGKNKLIMRWLSHRGGALDFADFKQQFPGERYPVVVALGADPVTILGAVTPVPDSMSEYAF
AGLLRGERTEVCKALSCDLEVPATSEIILEGYIDPEELAEEGPYGDHTGYYNETDKFPVFTVTHITHRKDAIYHSTYTGR
PPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVIVDED
VNCRDWQDVIWAITTRMDPKRDTVMIENTPIDYLDFASPVAGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDSI
WDELGIDDSPTL

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=487, Percent_Identity=75.9753593429158, Blast_Score=790, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=453, Percent_Identity=25.1655629139073, Blast_Score=120, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55650; Mature: 55519

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAKGPALLFENPKDHHMPVL
CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEE
VNLFGTPKRVAMALGKDDPLALREVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPK
EEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHCCCCH
TVRNPPCQQVIKTGDEVDLTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQL
HCCCCCHHHHHHCCCCCCHHHCCHHHCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHH
LGKNKLIMRWLSHRGGALDFADFKQQFPGERYPVVVALGADPVTILGAVTPVPDSMSEYA
HCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHH
FAGLLRGERTEVCKALSCDLEVPATSEIILEGYIDPEELAEEGPYGDHTGYYNETDKFPV
HHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCE
FTVTHITHRKDAIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSY
EEEEEECCCCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCE
RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVIVDEDVNCRDWQDVIWAITTRMDP
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCC
KRDTVMIENTPIDYLDFASPVAGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDS
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHH
IWDELGIDDSPTL
HHHHHCCCCCCCC
>Mature Secondary Structure 
SFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAKGPALLFENPKDHHMPVL
CHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEE
VNLFGTPKRVAMALGKDDPLALREVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPK
EEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHCCCCH
TVRNPPCQQVIKTGDEVDLTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQL
HCCCCCHHHHHHCCCCCCHHHCCHHHCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHH
LGKNKLIMRWLSHRGGALDFADFKQQFPGERYPVVVALGADPVTILGAVTPVPDSMSEYA
HCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHH
FAGLLRGERTEVCKALSCDLEVPATSEIILEGYIDPEELAEEGPYGDHTGYYNETDKFPV
HHHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCE
FTVTHITHRKDAIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSY
EEEEEECCCCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCE
RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVIVDEDVNCRDWQDVIWAITTRMDP
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCC
KRDTVMIENTPIDYLDFASPVAGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDS
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHH
IWDELGIDDSPTL
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA