| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877081
Identifier: 160877081
GI number: 160877081
Start: 4683952
End: 4684161
Strand: Reverse
Name: 160877081
Synonym: Sbal195_3977
Alternate gene names: NA
Gene position: 4684161-4683952 (Counterclockwise)
Preceding gene: 160877082
Following gene: 160877080
Centisome position: 87.6
GC content: 45.71
Gene sequence:
>210_bases ATGTCTTTATTTAAATCGCGCGCTTTTTCTAAGCAAAATGTTTCTAAAATCAGTGCTATTGCGTTGGTGCTGGCGTTTAC CGCTGGGCTGAGTGCCTGCGCGCCAGAAGTGGGTAGCGATGCTTGGTGTAAGCAGATGAAAGATAAGCCATCTGGAGATT GGACTGCCAATGAAGCCGCAGATTACGCTAAACACTGCGTGTTTAAATAA
Upstream 100 bases:
>100_bases ATGGTTTCCCCTAGAACAGAAAACCAAAGCGATTGCTTGGATCACTAAGCGTTCGAATATCTAATGGTCTTATGTAGACC GTATTTACAAGGAATGAAGT
Downstream 100 bases:
>100_bases GCTGGCTTTTGAATAAAACGCAGGTTTAAGCATCACAGCCGAGCATGCAAATATTAGCTAGCGAGTATTAGCATGCTAAT GTTTGCAAGCTGTGAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSLFKSRAFSKQNVSKISAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADYAKHCVFK
Sequences:
>Translated_69_residues MSLFKSRAFSKQNVSKISAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADYAKHCVFK >Mature_68_residues SLFKSRAFSKQNVSKISAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADYAKHCVFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7429; Mature: 7297
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFKSRAFSKQNVSKISAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAA CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHH DYAKHCVFK HHHHHHCCC >Mature Secondary Structure SLFKSRAFSKQNVSKISAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAA CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHH DYAKHCVFK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA