| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877058
Identifier: 160877058
GI number: 160877058
Start: 4659224
End: 4660099
Strand: Reverse
Name: 160877058
Synonym: Sbal195_3954
Alternate gene names: NA
Gene position: 4660099-4659224 (Counterclockwise)
Preceding gene: 160877059
Following gene: 160877057
Centisome position: 87.15
GC content: 48.52
Gene sequence:
>876_bases ATGCAAAAGCGGCCTAAGACATCAAAACATAACTCTAAAGGTGCGTGTCTGCGGCGTTTTGGGCGCAGCCTATGTATGAG TTTAGGCTTGTGCTTAAGTTTGTTAGCCTTACCTCTTTACGCCGCTCAAAGGCAGCCCGTGTTAATTCCGACATTAACAC CCGTAGCGGATTGGAAAAACTTAACTTACATCACCCAAGCCTTTAGTGAAATCGCCCTTAAAAATGAGTATGACGTGGCG AAACACAAGGTGCGTAAGTGGCGCATTCCGGTACGAGTGTTTGTCGAACATCAAGTGGGCGACAGGGCGCTGCACACCCA ATTAGTACGGATGCACTTAGCGCACTTAGCCGAGATTACGGGTCATGATATTCAGCTGGTGGATACGCTCTTGGATGCAA ATCTGCACTTAGTGTTTACCCGTCAATCCCAATGGGAGAGCGAGGTTACCCGCTTAATGGGGCCAAGTTCGGCGAAGAAT GTCCATGGCTCAGTGTGTATGGCCAAGTTTGCCCTTAATGCTAAGAGCGAAATTGAACGCGCATGGGTGATCATTCCCGT CGATCAGGCGCAAATGCACGGTAAGTTAGTGGCTTGTGTGGTCGAGGAAATCACTCAAGTACTTGGGCTACCCAATGATT CTGAAAAAGTATTCCCCTCCATCTTTAACGATAAAACCCCGCAGGATTTACTCACTGGGCTCGATTTCATTCTGCTAAAA CTGCTCTATAACTCGAGTATTCGCGCTGGTATGACGGCCGCTGAGGTCAAAGCGCCGTTGCAGTTCTTGCTCGAACAATG GCAGCGTGATGGCACACTTACCCATGCCGATAAAACCGTGCGTCAAGGCCAGTTATACCCTTTATTAGGTTATTGA
Upstream 100 bases:
>100_bases CTATGGTTTAGCTGCCTGTTTGTGGATTTCGACCGCTTTTATCGGCATCACTGCTATGATTTCGATTAAGTTACCTCGGC AAGCTGTGGAATAAGTGCTA
Downstream 100 bases:
>100_bases TGCTTGAGTGTTACTGCGAAAGTTGACATTGCTCGCATGCGACCAATTAATCCTTTTTCTTTGAGGAATAAGGGCATAGT CTAGCTTTATACAAGGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MQKRPKTSKHNSKGACLRRFGRSLCMSLGLCLSLLALPLYAAQRQPVLIPTLTPVADWKNLTYITQAFSEIALKNEYDVA KHKVRKWRIPVRVFVEHQVGDRALHTQLVRMHLAHLAEITGHDIQLVDTLLDANLHLVFTRQSQWESEVTRLMGPSSAKN VHGSVCMAKFALNAKSEIERAWVIIPVDQAQMHGKLVACVVEEITQVLGLPNDSEKVFPSIFNDKTPQDLLTGLDFILLK LLYNSSIRAGMTAAEVKAPLQFLLEQWQRDGTLTHADKTVRQGQLYPLLGY
Sequences:
>Translated_291_residues MQKRPKTSKHNSKGACLRRFGRSLCMSLGLCLSLLALPLYAAQRQPVLIPTLTPVADWKNLTYITQAFSEIALKNEYDVA KHKVRKWRIPVRVFVEHQVGDRALHTQLVRMHLAHLAEITGHDIQLVDTLLDANLHLVFTRQSQWESEVTRLMGPSSAKN VHGSVCMAKFALNAKSEIERAWVIIPVDQAQMHGKLVACVVEEITQVLGLPNDSEKVFPSIFNDKTPQDLLTGLDFILLK LLYNSSIRAGMTAAEVKAPLQFLLEQWQRDGTLTHADKTVRQGQLYPLLGY >Mature_291_residues MQKRPKTSKHNSKGACLRRFGRSLCMSLGLCLSLLALPLYAAQRQPVLIPTLTPVADWKNLTYITQAFSEIALKNEYDVA KHKVRKWRIPVRVFVEHQVGDRALHTQLVRMHLAHLAEITGHDIQLVDTLLDANLHLVFTRQSQWESEVTRLMGPSSAKN VHGSVCMAKFALNAKSEIERAWVIIPVDQAQMHGKLVACVVEEITQVLGLPNDSEKVFPSIFNDKTPQDLLTGLDFILLK LLYNSSIRAGMTAAEVKAPLQFLLEQWQRDGTLTHADKTVRQGQLYPLLGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32780; Mature: 32780
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRPKTSKHNSKGACLRRFGRSLCMSLGLCLSLLALPLYAAQRQPVLIPTLTPVADWKN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCH LTYITQAFSEIALKNEYDVAKHKVRKWRIPVRVFVEHQVGDRALHTQLVRMHLAHLAEIT HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC GHDIQLVDTLLDANLHLVFTRQSQWESEVTRLMGPSSAKNVHGSVCMAKFALNAKSEIER CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCE AWVIIPVDQAQMHGKLVACVVEEITQVLGLPNDSEKVFPSIFNDKTPQDLLTGLDFILLK EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH LLYNSSIRAGMTAAEVKAPLQFLLEQWQRDGTLTHADKTVRQGQLYPLLGY HHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCEEECCC >Mature Secondary Structure MQKRPKTSKHNSKGACLRRFGRSLCMSLGLCLSLLALPLYAAQRQPVLIPTLTPVADWKN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHCCCH LTYITQAFSEIALKNEYDVAKHKVRKWRIPVRVFVEHQVGDRALHTQLVRMHLAHLAEIT HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC GHDIQLVDTLLDANLHLVFTRQSQWESEVTRLMGPSSAKNVHGSVCMAKFALNAKSEIER CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHCE AWVIIPVDQAQMHGKLVACVVEEITQVLGLPNDSEKVFPSIFNDKTPQDLLTGLDFILLK EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH LLYNSSIRAGMTAAEVKAPLQFLLEQWQRDGTLTHADKTVRQGQLYPLLGY HHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA