| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877055
Identifier: 160877055
GI number: 160877055
Start: 4654554
End: 4655909
Strand: Direct
Name: 160877055
Synonym: Sbal195_3951
Alternate gene names: NA
Gene position: 4654554-4655909 (Clockwise)
Preceding gene: 160877053
Following gene: 160877066
Centisome position: 87.05
GC content: 48.97
Gene sequence:
>1356_bases ATGTCTGAGTCGTTAGCCCAATATCAACAAGATCTACGCCGTTTTTCCGATGAATTAATTCGCATCCAAACGCCAATAAA AATCTTAGATGCTATCAAATGGCCGCGGGAAATGGAGGAGCGCTTTCTCTCGAATAAGGGCACTGTACTTCCGGCTATCA AGCAAGAGTTCTATCAAAACATTGCCTTACCTTTTGACCCCGTCAAAACCCACGCAGAACTCGCCTCCCTAAAACAGGAT ATCCATAGACGTTTAGGTAAACGGGATAAACTCGGCAAGATATTGGTGGCTAACGTCGATCAATATCGCCTTGTGGTCGA TATGCTCGAAAACAGAGGCACGCCGACCTTTGGTAAACTTAGCCAAGAATTATACGGCAGCGCGAGTCACAGATTGCACG GCGATCGTCATACGCTGCGACAGTTAGGCGATAAACTCAGTTATATCTTCTCGCTGCCGGCAGCGAGACACATGAATAAA CATCATCCTAAGATTATTAGCGCACCCGAAGCGGTTCACGTGCTCAGTCAACGTTTAGAGAAATACTTCCATAGCGATGA CATGCGCGTGCGCCTCAGTGACGGTATCGTCTCCGATGCCGCTGTGGGTGGTGATACCGTTAAGCTCAATAGCAAAGCCA TGTTCAGCGAGTCGGATCTCAATGTATACGAGGTTCACGAAGGTTGGGTGCATGTCGGCACAACGCTCAATGGTCGAGCC CAACCCCACGCCACTTGGCTCAGTGTCGGTTCGCCGCGGGTAGCCGCGACTCAAGAGGGTTTAGCTGTTTTACTGGAAAT GCTGACCCTAAGTTCAAATCCGGGACGAGCTCGGCGTATTAGCGACCGTGTCGCCGCGGTCGACATGGCGGAAAATGGCG CCGACTTTATTGAAGTATTCAATTATTTCAGAGGATTAAACCTGAGCGCGACCGACAGTTATCGCGTCACCCAAAGGGTT TTCCGTGGGGGTATGGTAGAAGGCGGCAGCTTCTTCACTAAGGATATTTCCTATGTGCGCGGCTATGTGGAAAACATTAA CTTTATCCGCAGTGCTATCACCTCAGGCCTTCCCGAACTTATCCCTATGTTGTTCCTCGGTAAATTGGCGATCGAAGATA TCCCTGTGTTATACCAGGCCTGCCAAGAGGGCATCCTGACCACACCGAAATATTTACCGCCCATGTTCGATAACTTTAGC GGTCTTTACGCTTGGTTTGGTTTTGCTTCAGGTCTCGCGGGAATCGATTTGAAAGGCGTACAACGTCACTTCACTCGCCT GTTTAAAGACTTACCAAACGTCGAACCAACCTTTGAGTTACTCGACGATACTGAGTTCGATAACAACACGGATTAA
Upstream 100 bases:
>100_bases TATTTCCTCAGCTAGCCTGCGAATCAATATGAATAAATGAGGTTTAAGGCTATGATTAGCCACATCTCTCTCGCTGAAAT TACCTGCAGGATATACGGGA
Downstream 100 bases:
>100_bases TACGTAAATATTATTGATTTAAATGAAAAAAGCTCACTACTAGGTGAGCTTTTTTTATTCTAACGTGACTCAACTTTATT CATCAGATTAAGATTGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSESLAQYQQDLRRFSDELIRIQTPIKILDAIKWPREMEERFLSNKGTVLPAIKQEFYQNIALPFDPVKTHAELASLKQD IHRRLGKRDKLGKILVANVDQYRLVVDMLENRGTPTFGKLSQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNK HHPKIISAPEAVHVLSQRLEKYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAENGADFIEVFNYFRGLNLSATDSYRVTQRV FRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPELIPMLFLGKLAIEDIPVLYQACQEGILTTPKYLPPMFDNFS GLYAWFGFASGLAGIDLKGVQRHFTRLFKDLPNVEPTFELLDDTEFDNNTD
Sequences:
>Translated_451_residues MSESLAQYQQDLRRFSDELIRIQTPIKILDAIKWPREMEERFLSNKGTVLPAIKQEFYQNIALPFDPVKTHAELASLKQD IHRRLGKRDKLGKILVANVDQYRLVVDMLENRGTPTFGKLSQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNK HHPKIISAPEAVHVLSQRLEKYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAENGADFIEVFNYFRGLNLSATDSYRVTQRV FRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPELIPMLFLGKLAIEDIPVLYQACQEGILTTPKYLPPMFDNFS GLYAWFGFASGLAGIDLKGVQRHFTRLFKDLPNVEPTFELLDDTEFDNNTD >Mature_450_residues SESLAQYQQDLRRFSDELIRIQTPIKILDAIKWPREMEERFLSNKGTVLPAIKQEFYQNIALPFDPVKTHAELASLKQDI HRRLGKRDKLGKILVANVDQYRLVVDMLENRGTPTFGKLSQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNKH HPKIISAPEAVHVLSQRLEKYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRAQ PHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAENGADFIEVFNYFRGLNLSATDSYRVTQRVF RGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPELIPMLFLGKLAIEDIPVLYQACQEGILTTPKYLPPMFDNFSG LYAWFGFASGLAGIDLKGVQRHFTRLFKDLPNVEPTFELLDDTEFDNNTD
Specific function: Unknown
COG id: COG3930
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50821; Mature: 50689
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESLAQYQQDLRRFSDELIRIQTPIKILDAIKWPREMEERFLSNKGTVLPAIKQEFYQN CCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH IALPFDPVKTHAELASLKQDIHRRLGKRDKLGKILVANVDQYRLVVDMLENRGTPTFGKL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHH SQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNKHHPKIISAPEAVHVLSQRLE HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHH KYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA HHHCCCCCEEEECCCCHHHHCCCCCEEEECCCCEECCCCCCEEEECCCEEEECCEECCCC QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAENGADFIEVF CCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH NYFRGLNLSATDSYRVTQRVFRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPEL HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IPMLFLGKLAIEDIPVLYQACQEGILTTPKYLPPMFDNFSGLYAWFGFASGLAGIDLKGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHH QRHFTRLFKDLPNVEPTFELLDDTEFDNNTD HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure SESLAQYQQDLRRFSDELIRIQTPIKILDAIKWPREMEERFLSNKGTVLPAIKQEFYQN CHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH IALPFDPVKTHAELASLKQDIHRRLGKRDKLGKILVANVDQYRLVVDMLENRGTPTFGKL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHH SQELYGSASHRLHGDRHTLRQLGDKLSYIFSLPAARHMNKHHPKIISAPEAVHVLSQRLE HHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHH KYFHSDDMRVRLSDGIVSDAAVGGDTVKLNSKAMFSESDLNVYEVHEGWVHVGTTLNGRA HHHCCCCCEEEECCCCHHHHCCCCCEEEECCCCEECCCCCCEEEECCCEEEECCEECCCC QPHATWLSVGSPRVAATQEGLAVLLEMLTLSSNPGRARRISDRVAAVDMAENGADFIEVF CCCHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH NYFRGLNLSATDSYRVTQRVFRGGMVEGGSFFTKDISYVRGYVENINFIRSAITSGLPEL HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IPMLFLGKLAIEDIPVLYQACQEGILTTPKYLPPMFDNFSGLYAWFGFASGLAGIDLKGV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCHHHH QRHFTRLFKDLPNVEPTFELLDDTEFDNNTD HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA