| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is smtA [H]
Identifier: 160877037
GI number: 160877037
Start: 4638228
End: 4639001
Strand: Direct
Name: smtA [H]
Synonym: Sbal195_3933
Alternate gene names: 160877037
Gene position: 4638228-4639001 (Clockwise)
Preceding gene: 160877035
Following gene: 160877039
Centisome position: 86.74
GC content: 47.29
Gene sequence:
>774_bases GTGCAAGATAAGAATTTTGACAAGCTCGCGCAAAAATTTGCGAAAAATATTTATGGTACGCCTAAAGGCGACATTCGTGC CGCGGTACTGTGGCGCGACCTCGCACCTGCGCTAGCAAAACTGGGGAATAGAAAACTCAGAGTATTAGATGCAGGCGGTG GTTTTGGTTACTTTAGCCAAAAATTAGCCCGCCTCGGCCACGAAGTGGTGCTGTGCGATATTTCAGCGGAGATGTTGGCG CAAGCGCAAGAACAGATAGATGCTTCGTCTGAACCATTAGCTATCCAGCTTATCCATGCGCCTATTCAAGCACTATCGGT CGAGCACCATGGCTATTTCGATATCATATTGTGCCATGCGGTCGTCGAATGGTTAACGGATGCTAAGCCCACGATGGCGG GCCTACTCACTATGCTTAAACCTGCGGGAATATTCTCTTTGATGTTTTACAACAAAGAGGCCATGCGTTTTCATGCCTTA GTGTCGGGTAATTTCGATTACGTCGCCGCAGATTTAAAAGTGAAAAAGAAAGTGCGGTTAACACCCACACATCCACTTTA TATTCAAGAGGTTAAAGAGTGGTTTAACGAGTGGCAGATGTCACTCATCAGCCAGTCCGGCGTGCGGGTGATCCACGACT ATTTGAAAAAGAGTCAGCCAGCGGATTTCGATTATCAAAAACTGCTGCAAATGGAGCTCGAGTATTCACAACGCGAGCCC TACATTTCCCTCGGCCGATATGTACACTTTTTAGGGCAAAGCCCAGCAGTTTGA
Upstream 100 bases:
>100_bases GTAAATCTGTCCATCTCGATTCGGCAATAACATCTCCTGAGTGCGAAAAATTTACGTCTGTGCCACACTATCGTTCCACT CTCTTTAACCTAGTTATCAC
Downstream 100 bases:
>100_bases ACCCGCATGGTTATAAACCCTATGTCCTAAGCGATTACTCGCAAGTCTGTTTCCAGCAGGCGCTCACTTTGGCGCCTGCT TGTTCTAGCAATTGCACCAC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MQDKNFDKLAQKFAKNIYGTPKGDIRAAVLWRDLAPALAKLGNRKLRVLDAGGGFGYFSQKLARLGHEVVLCDISAEMLA QAQEQIDASSEPLAIQLIHAPIQALSVEHHGYFDIILCHAVVEWLTDAKPTMAGLLTMLKPAGIFSLMFYNKEAMRFHAL VSGNFDYVAADLKVKKKVRLTPTHPLYIQEVKEWFNEWQMSLISQSGVRVIHDYLKKSQPADFDYQKLLQMELEYSQREP YISLGRYVHFLGQSPAV
Sequences:
>Translated_257_residues MQDKNFDKLAQKFAKNIYGTPKGDIRAAVLWRDLAPALAKLGNRKLRVLDAGGGFGYFSQKLARLGHEVVLCDISAEMLA QAQEQIDASSEPLAIQLIHAPIQALSVEHHGYFDIILCHAVVEWLTDAKPTMAGLLTMLKPAGIFSLMFYNKEAMRFHAL VSGNFDYVAADLKVKKKVRLTPTHPLYIQEVKEWFNEWQMSLISQSGVRVIHDYLKKSQPADFDYQKLLQMELEYSQREP YISLGRYVHFLGQSPAV >Mature_257_residues MQDKNFDKLAQKFAKNIYGTPKGDIRAAVLWRDLAPALAKLGNRKLRVLDAGGGFGYFSQKLARLGHEVVLCDISAEMLA QAQEQIDASSEPLAIQLIHAPIQALSVEHHGYFDIILCHAVVEWLTDAKPTMAGLLTMLKPAGIFSLMFYNKEAMRFHAL VSGNFDYVAADLKVKKKVRLTPTHPLYIQEVKEWFNEWQMSLISQSGVRVIHDYLKKSQPADFDYQKLLQMELEYSQREP YISLGRYVHFLGQSPAV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787151, Length=255, Percent_Identity=44.3137254901961, Blast_Score=242, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29112; Mature: 29112
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00879 ODR_DC_2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDKNFDKLAQKFAKNIYGTPKGDIRAAVLWRDLAPALAKLGNRKLRVLDAGGGFGYFSQ CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH KLARLGHEVVLCDISAEMLAQAQEQIDASSEPLAIQLIHAPIQALSVEHHGYFDIILCHA HHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHH VVEWLTDAKPTMAGLLTMLKPAGIFSLMFYNKEAMRFHALVSGNFDYVAADLKVKKKVRL HHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHEEHHCCCCCCEEEECEEEECEEEE TPTHPLYIQEVKEWFNEWQMSLISQSGVRVIHDYLKKSQPADFDYQKLLQMELEYSQREP CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC YISLGRYVHFLGQSPAV HHHHHHHHHHHCCCCCC >Mature Secondary Structure MQDKNFDKLAQKFAKNIYGTPKGDIRAAVLWRDLAPALAKLGNRKLRVLDAGGGFGYFSQ CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH KLARLGHEVVLCDISAEMLAQAQEQIDASSEPLAIQLIHAPIQALSVEHHGYFDIILCHA HHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHH VVEWLTDAKPTMAGLLTMLKPAGIFSLMFYNKEAMRFHALVSGNFDYVAADLKVKKKVRL HHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHEEHHCCCCCCEEEECEEEECEEEE TPTHPLYIQEVKEWFNEWQMSLISQSGVRVIHDYLKKSQPADFDYQKLLQMELEYSQREP CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC YISLGRYVHFLGQSPAV HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7513784; 8905232; 9278503; 8566713 [H]