| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fhs [H]
Identifier: 160877034
GI number: 160877034
Start: 4634049
End: 4635806
Strand: Reverse
Name: fhs [H]
Synonym: Sbal195_3930
Alternate gene names: 160877034
Gene position: 4635806-4634049 (Counterclockwise)
Preceding gene: 160877036
Following gene: 160877032
Centisome position: 86.69
GC content: 51.02
Gene sequence:
>1758_bases ATGCTGACAGATATGGATATTTCGAGTCGCGCAAGCCTTAAAAACATCACCGAAATTGGCGTCGACTTAGGCCTGTTACC CGAAGAGATGATGCTATTTGGTCACACTAAAGCCAAGGTGGAGCTCAGTGTGTTGCAGCGTTTAGCGGGGCAACGCAAAG GTAAATTGATTATCGTCACCGCAGTTACGCCTACTCCCCACGGCGAAGGTAAAACGGTGACGAGCATTGGCTTAACACAA TCGTTAAATGCCATAGGCCAAAAGGCCTGTGCTTGTATTCGCCAGCCTAGCATGGGACCTGTGTTTGGGGTGAAAGGCGG TGCTGCGGGTGGCGGTTATGCGCAAGTGGTGCCCATGCAGGAGATGAACTTACATCTCACGGGTGACATTCATGCCGTCA GCAGTGCCCACAATTTAGGGGCGGCGGCGATTGCGGCGCGGCTATTCCACGAGGCGCGCTTAGGTAAAACAGAATTTGAA GCGCAATCTGGACAAGCGTTTTTGGATATAGCTCCCAACGAGATCCGCTGGCACCGAGTGGTCGATCATAATGATCGCTG CCTTAGGCAAATTCATGTGGGCTTAGGTGATAATAACGGCCCAGAGTACGGATCTAGCTTTGATATTACCGCCGCCTCTG AGTTGATGGCGATTTTAGCCTTAAGCCATGATTTGGCGGACATGCGGGTGCGGATCGGTCGTTTAGTGTTGGCCTTAAAT ACCCAAGGGCAAGTGATTACCGCCGAAGATTTAGGTGTCGCTGGGGCGATGACGGCCATCATGGCCGATGCGATAAAACC GACGTTAATGCAGACCTTAAATGGCTCGCCTTGTCTGATCCATTCGGGACCCTTTGCCAATATTGCCCACGGTAACTCGT CGATCATTGCCGATGATATCGCCCTTAGGCTGGCGGACTTTGTGGTGACTGAAGGCGGTTTCGGCTCGGATATGGGCTTT GAAAAGTTCTGTAATATCAAGGTTCGTCAATCGGGTCAGGCGCCAGCTGCCGCTGTGTTGGTGACGACTTTAAAAGCGCT GAAGGCCAATAGTGGCTTGGCAACTGAGGTGGATAGCAATGTATCAAATATCCATGTGCCAAAGATCAATGCGGCAAACA TCAATGCCCCAGATCAGGCTCGACTCGAAGCGGGCTTTGCAAATTTAAACTGGCATATCAACAATGTGGCGCGTTATGGC ATTCCTGTGGTGGTTGCTATTAACCGTTTCGCCACTGATTCCGATGCTGAGTTGCAATGGCTAATGGAAGCCGTCAACGC GAGTGCTGCCTTTGGCTGTGAAATTAGCGATGCCTTCAGCCAAGGGGAGGCGGGCGCTATTGCCTTAGCGCAAACTGTGG TTCGCGCCGCTGAAATTGAGAGTCAGTTCAAGCTGTTATATCCAGATGAAGCGTCATTGGAGGCAAAGTTATCCACCTTA GCCGAAGTGGGTTATGGCGCTGCAGGCGTGAGTCTTTCTATCGAGGCGAAACAGCAGGCGCAGCAACTGACCGCGCTTGG CTATGGGCATTTGCCTTTGTGTATGGCCAAAACGCCGTTATCCATTAGCCACGATCCTAGCTTAAAGGGTGTTCCTAAGG ATTTTGTGGTGCCAGTGCGAGAGTTAGTGTTACATGCGGGGGCGGGATTTATAACTGCCTTAGTGGGTAATGTGATGACT ATGCCAGGACTTGGGCTTAAACCGGGATACTTGAAAATCGATATTGATGCCAAAGGTGAGATAGTCGGTTTAGGCTAA
Upstream 100 bases:
>100_bases CTTAAAGCCAATCACCTAATATCCGCCCTATTCAATGAGTGTTGTGCTTAGCAACCCCTCATACTAAACCAAAGCGTATC TGAAAGGGAGAAATCGACGT
Downstream 100 bases:
>100_bases CGTTTAGATTCAAAACTAACATTTCAATGAAAACTCACGCTTAGATGCAAAAGCGCTGCAGAGATAAAAAAGGGCGAGCT TGCTGCTACGCCCTTTGACT
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MLTDMDISSRASLKNITEIGVDLGLLPEEMMLFGHTKAKVELSVLQRLAGQRKGKLIIVTAVTPTPHGEGKTVTSIGLTQ SLNAIGQKACACIRQPSMGPVFGVKGGAAGGGYAQVVPMQEMNLHLTGDIHAVSSAHNLGAAAIAARLFHEARLGKTEFE AQSGQAFLDIAPNEIRWHRVVDHNDRCLRQIHVGLGDNNGPEYGSSFDITAASELMAILALSHDLADMRVRIGRLVLALN TQGQVITAEDLGVAGAMTAIMADAIKPTLMQTLNGSPCLIHSGPFANIAHGNSSIIADDIALRLADFVVTEGGFGSDMGF EKFCNIKVRQSGQAPAAAVLVTTLKALKANSGLATEVDSNVSNIHVPKINAANINAPDQARLEAGFANLNWHINNVARYG IPVVVAINRFATDSDAELQWLMEAVNASAAFGCEISDAFSQGEAGAIALAQTVVRAAEIESQFKLLYPDEASLEAKLSTL AEVGYGAAGVSLSIEAKQQAQQLTALGYGHLPLCMAKTPLSISHDPSLKGVPKDFVVPVRELVLHAGAGFITALVGNVMT MPGLGLKPGYLKIDIDAKGEIVGLG
Sequences:
>Translated_585_residues MLTDMDISSRASLKNITEIGVDLGLLPEEMMLFGHTKAKVELSVLQRLAGQRKGKLIIVTAVTPTPHGEGKTVTSIGLTQ SLNAIGQKACACIRQPSMGPVFGVKGGAAGGGYAQVVPMQEMNLHLTGDIHAVSSAHNLGAAAIAARLFHEARLGKTEFE AQSGQAFLDIAPNEIRWHRVVDHNDRCLRQIHVGLGDNNGPEYGSSFDITAASELMAILALSHDLADMRVRIGRLVLALN TQGQVITAEDLGVAGAMTAIMADAIKPTLMQTLNGSPCLIHSGPFANIAHGNSSIIADDIALRLADFVVTEGGFGSDMGF EKFCNIKVRQSGQAPAAAVLVTTLKALKANSGLATEVDSNVSNIHVPKINAANINAPDQARLEAGFANLNWHINNVARYG IPVVVAINRFATDSDAELQWLMEAVNASAAFGCEISDAFSQGEAGAIALAQTVVRAAEIESQFKLLYPDEASLEAKLSTL AEVGYGAAGVSLSIEAKQQAQQLTALGYGHLPLCMAKTPLSISHDPSLKGVPKDFVVPVRELVLHAGAGFITALVGNVMT MPGLGLKPGYLKIDIDAKGEIVGLG >Mature_585_residues MLTDMDISSRASLKNITEIGVDLGLLPEEMMLFGHTKAKVELSVLQRLAGQRKGKLIIVTAVTPTPHGEGKTVTSIGLTQ SLNAIGQKACACIRQPSMGPVFGVKGGAAGGGYAQVVPMQEMNLHLTGDIHAVSSAHNLGAAAIAARLFHEARLGKTEFE AQSGQAFLDIAPNEIRWHRVVDHNDRCLRQIHVGLGDNNGPEYGSSFDITAASELMAILALSHDLADMRVRIGRLVLALN TQGQVITAEDLGVAGAMTAIMADAIKPTLMQTLNGSPCLIHSGPFANIAHGNSSIIADDIALRLADFVVTEGGFGSDMGF EKFCNIKVRQSGQAPAAAVLVTTLKALKANSGLATEVDSNVSNIHVPKINAANINAPDQARLEAGFANLNWHINNVARYG IPVVVAINRFATDSDAELQWLMEAVNASAAFGCEISDAFSQGEAGAIALAQTVVRAAEIESQFKLLYPDEASLEAKLSTL AEVGYGAAGVSLSIEAKQQAQQLTALGYGHLPLCMAKTPLSISHDPSLKGVPKDFVVPVRELVLHAGAGFITALVGNVMT MPGLGLKPGYLKIDIDAKGEIVGLG
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=622, Percent_Identity=47.588424437299, Blast_Score=505, Evalue=1e-143, Organism=Homo sapiens, GI36796743, Length=630, Percent_Identity=45.2380952380952, Blast_Score=488, Evalue=1e-138, Organism=Homo sapiens, GI310124614, Length=81, Percent_Identity=48.1481481481481, Blast_Score=86, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17568737, Length=627, Percent_Identity=46.7304625199362, Blast_Score=503, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17568739, Length=627, Percent_Identity=46.7304625199362, Blast_Score=503, Evalue=1e-142, Organism=Saccharomyces cerevisiae, GI6319558, Length=638, Percent_Identity=43.5736677115987, Blast_Score=468, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6321643, Length=632, Percent_Identity=43.9873417721519, Blast_Score=465, Evalue=1e-132, Organism=Drosophila melanogaster, GI62472483, Length=625, Percent_Identity=43.04, Blast_Score=455, Evalue=1e-128, Organism=Drosophila melanogaster, GI45551871, Length=625, Percent_Identity=43.04, Blast_Score=455, Evalue=1e-128, Organism=Drosophila melanogaster, GI24645718, Length=625, Percent_Identity=43.04, Blast_Score=455, Evalue=1e-128, Organism=Drosophila melanogaster, GI17137370, Length=625, Percent_Identity=43.04, Blast_Score=455, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 61417; Mature: 61417
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00721 FTHFS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDMDISSRASLKNITEIGVDLGLLPEEMMLFGHTKAKVELSVLQRLAGQRKGKLIIVT CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEE AVTPTPHGEGKTVTSIGLTQSLNAIGQKACACIRQPSMGPVFGVKGGAAGGGYAQVVPMQ EECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEHH EMNLHLTGDIHAVSSAHNLGAAAIAARLFHEARLGKTEFEAQSGQAFLDIAPNEIRWHRV HCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEE VDHNDRCLRQIHVGLGDNNGPEYGSSFDITAASELMAILALSHDLADMRVRIGRLVLALN CCCCHHEEHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEEEEEEEE TQGQVITAEDLGVAGAMTAIMADAIKPTLMQTLNGSPCLIHSGPFANIAHGNSSIIADDI CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCEEHHHH ALRLADFVVTEGGFGSDMGFEKFCNIKVRQSGQAPAAAVLVTTLKALKANSGLATEVDSN HHHHHHHHEECCCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEECCCC VSNIHVPKINAANINAPDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDSDAELQW CCEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEECHHHCCCEEEEEEECCCCCCCHHHHH LMEAVNASAAFGCEISDAFSQGEAGAIALAQTVVRAAEIESQFKLLYPDEASLEAKLSTL HHHHHCCCCEECCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHH AEVGYGAAGVSLSIEAKQQAQQLTALGYGHLPLCMAKTPLSISHDPSLKGVPKDFVVPVR HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHH ELVLHAGAGFITALVGNVMTMPGLGLKPGYLKIDIDAKGEIVGLG HHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECC >Mature Secondary Structure MLTDMDISSRASLKNITEIGVDLGLLPEEMMLFGHTKAKVELSVLQRLAGQRKGKLIIVT CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHCCCCCCEEEEE AVTPTPHGEGKTVTSIGLTQSLNAIGQKACACIRQPSMGPVFGVKGGAAGGGYAQVVPMQ EECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEHH EMNLHLTGDIHAVSSAHNLGAAAIAARLFHEARLGKTEFEAQSGQAFLDIAPNEIRWHRV HCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEE VDHNDRCLRQIHVGLGDNNGPEYGSSFDITAASELMAILALSHDLADMRVRIGRLVLALN CCCCHHEEHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEEEEEEEE TQGQVITAEDLGVAGAMTAIMADAIKPTLMQTLNGSPCLIHSGPFANIAHGNSSIIADDI CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCEEHHHH ALRLADFVVTEGGFGSDMGFEKFCNIKVRQSGQAPAAAVLVTTLKALKANSGLATEVDSN HHHHHHHHEECCCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCEECCCC VSNIHVPKINAANINAPDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDSDAELQW CCEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEECHHHCCCEEEEEEECCCCCCCHHHHH LMEAVNASAAFGCEISDAFSQGEAGAIALAQTVVRAAEIESQFKLLYPDEASLEAKLSTL HHHHHCCCCEECCEEHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHH AEVGYGAAGVSLSIEAKQQAQQLTALGYGHLPLCMAKTPLSISHDPSLKGVPKDFVVPVR HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHH ELVLHAGAGFITALVGNVMTMPGLGLKPGYLKIDIDAKGEIVGLG HHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA