| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hflK [H]
Identifier: 160876995
GI number: 160876995
Start: 4585012
End: 4586151
Strand: Reverse
Name: hflK [H]
Synonym: Sbal195_3891
Alternate gene names: 160876995
Gene position: 4586151-4585012 (Counterclockwise)
Preceding gene: 160876996
Following gene: 160876994
Centisome position: 85.77
GC content: 47.02
Gene sequence:
>1140_bases ATGGCTTGGAACGAGCCCGGTAACAAGGGTAATGATCCTTGGGGAAATAAAGGTGGTAACGACAAAGGACCACCGGACCT TGACGAGGTTTTTCGTAATCTTTCAAAGCGCTTTGGCGGCAAAGGAAACGGCTCAGGCCAATCTTTTAGCTCGTTTAGCC TAATCATCATTCTTGCTGTTGCTGTAGTTGTTTGGGGACTTTCGGGTTTTTATACAATTAAAGAAGCTGAGCGTGGTGTG GCACTGCGATTTGGTAAACACGCTGGCGAAATTGGCCCTGGACTTCATTGGAAAGCCACATTTATCGACCAAATTTATCC CGTCGACATTCAATCGGTTCGCTCTATTCCTGCGTCTGGTAGCATGCTGACATCCGATGAAAACGTCGTGAAAGTTGAGC TTGATGTTCAGTATCGTATTTTAGATGCTTACTCATATCTATTTAGTGCCGTCGATGCGAACGCCAGCTTGCGTGAAGCG ACTGACAGTGCACTGCGTTATGTCATTGGACATAACAAGATGGATGATATTCTGACTACCGGCCGTGATGCTATTCGTCG CGATACGTGGAAAGAGTTAGAGCGCATTCTTGAACCGTACAAATTGGGTCTTGCTGTTGTTGACGTCAACTTCTTACCGG CGCGTCCGCCTGAAGAAGTGAAAGACGCCTTCGATGACGCGATTTCTGCCCAAGAAGATGAACAACGTTTTATTCGTGAA GCTGAAGCCTATGCCCGTGAAATTGAACCAAAAGCTCGTGGTGAAGTTGAACGTATGGCACAACAAGCGAATGCTTATAA AGAGCGTGAAGTCTTAGAAGCTCGCGGTAAAGTGGCTCGTTTTGAGCTGTTATTACCTGAGTACCAAGCCGCGCCTGACG TGACTCGCAAGCGTTTGTATCTCGATACAATGCAGCAAGTGATGACAGATACGAATAAAGTGCTGATTGATGCCAAGAAC AACGGCAACTTAATGTACCTACCGCTAGATAAGTTAATTCAGCAGAAGCCTGCGACAACTGAGCTGGAAGCTAAGCCACA GCAAAATGTCAATTCTTCATCTGTATCAACGACTCGCGCGAATGAGCCTTTGAGTGGACGTCCATCCCGCGATGATCGTA CTCGCCAAGGGAGGGAGTAA
Upstream 100 bases:
>100_bases ACAGAGTCAGGGTGAGTTAGAAACCTTCATCTACGAAGATTCGATAGATGAGGCTGTTTGTTAATAATCTAATTTATTTC ATCCACTTATGGAGTGCTAA
Downstream 100 bases:
>100_bases TCCATGGGTAGATTAAGCGTTATTCTTATCGCCGTACTCTTAGGTATTGGTTTGTCATCTTTAATGGTGGTGAATGAAGG CGAACGCGCAATTGTGGCGC
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MAWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGQSFSSFSLIIILAVAVVVWGLSGFYTIKEAERGV ALRFGKHAGEIGPGLHWKATFIDQIYPVDIQSVRSIPASGSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREA TDSALRYVIGHNKMDDILTTGRDAIRRDTWKELERILEPYKLGLAVVDVNFLPARPPEEVKDAFDDAISAQEDEQRFIRE AEAYAREIEPKARGEVERMAQQANAYKEREVLEARGKVARFELLLPEYQAAPDVTRKRLYLDTMQQVMTDTNKVLIDAKN NGNLMYLPLDKLIQQKPATTELEAKPQQNVNSSSVSTTRANEPLSGRPSRDDRTRQGRE
Sequences:
>Translated_379_residues MAWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGQSFSSFSLIIILAVAVVVWGLSGFYTIKEAERGV ALRFGKHAGEIGPGLHWKATFIDQIYPVDIQSVRSIPASGSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREA TDSALRYVIGHNKMDDILTTGRDAIRRDTWKELERILEPYKLGLAVVDVNFLPARPPEEVKDAFDDAISAQEDEQRFIRE AEAYAREIEPKARGEVERMAQQANAYKEREVLEARGKVARFELLLPEYQAAPDVTRKRLYLDTMQQVMTDTNKVLIDAKN NGNLMYLPLDKLIQQKPATTELEAKPQQNVNSSSVSTTRANEPLSGRPSRDDRTRQGRE >Mature_378_residues AWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGQSFSSFSLIIILAVAVVVWGLSGFYTIKEAERGVA LRFGKHAGEIGPGLHWKATFIDQIYPVDIQSVRSIPASGSMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREAT DSALRYVIGHNKMDDILTTGRDAIRRDTWKELERILEPYKLGLAVVDVNFLPARPPEEVKDAFDDAISAQEDEQRFIREA EAYAREIEPKARGEVERMAQQANAYKEREVLEARGKVARFELLLPEYQAAPDVTRKRLYLDTMQQVMTDTNKVLIDAKNN GNLMYLPLDKLIQQKPATTELEAKPQQNVNSSSVSTTRANEPLSGRPSRDDRTRQGRE
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=361, Percent_Identity=53.185595567867, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI1786697, Length=284, Percent_Identity=22.5352112676056, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 42394; Mature: 42263
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGQSFSSFSLIIILAV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AVVVWGLSGFYTIKEAERGVALRFGKHAGEIGPGLHWKATFIDQIYPVDIQSVRSIPASG HHHHHCCCCCEEEHHHCCCEEEEECCCCCCCCCCCCEEHHHHHCCCCCCHHHHHCCCCCC SMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREATDSALRYVIGHNKMDDILTT CEEECCCCEEEEEECCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHC GRDAIRRDTWKELERILEPYKLGLAVVDVNFLPARPPEEVKDAFDDAISAQEDEQRFIRE CHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH AEAYAREIEPKARGEVERMAQQANAYKEREVLEARGKVARFELLLPEYQAAPDVTRKRLY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCHHHHHHHH LDTMQQVMTDTNKVLIDAKNNGNLMYLPLDKLIQQKPATTELEAKPQQNVNSSSVSTTRA HHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NEPLSGRPSRDDRTRQGRE CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AWNEPGNKGNDPWGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGQSFSSFSLIIILAV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AVVVWGLSGFYTIKEAERGVALRFGKHAGEIGPGLHWKATFIDQIYPVDIQSVRSIPASG HHHHHCCCCCEEEHHHCCCEEEEECCCCCCCCCCCCEEHHHHHCCCCCCHHHHHCCCCCC SMLTSDENVVKVELDVQYRILDAYSYLFSAVDANASLREATDSALRYVIGHNKMDDILTT CEEECCCCEEEEEECCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHC GRDAIRRDTWKELERILEPYKLGLAVVDVNFLPARPPEEVKDAFDDAISAQEDEQRFIRE CHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH AEAYAREIEPKARGEVERMAQQANAYKEREVLEARGKVARFELLLPEYQAAPDVTRKRLY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCHHHHHHHH LDTMQQVMTDTNKVLIDAKNNGNLMYLPLDKLIQQKPATTELEAKPQQNVNSSSVSTTRA HHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NEPLSGRPSRDDRTRQGRE CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]