Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160876981
Identifier: 160876981
GI number: 160876981
Start: 4569155
End: 4569958
Strand: Reverse
Name: 160876981
Synonym: Sbal195_3877
Alternate gene names: NA
Gene position: 4569958-4569155 (Counterclockwise)
Preceding gene: 160876982
Following gene: 160876976
Centisome position: 85.46
GC content: 44.9
Gene sequence:
>804_bases ATGCATACCGACATCAACGCGTTATTTGCCGCCCTGTGGCAAGACTATATTCAAATGACCCCTTCGGCGGCAAAAGTGCA TGCGCTGCTGGGCCATGGTAAGCCGATCATCAACGATCATATTGCCCTGCGTACTTTCAATATCGCTAAGGTGAATTTGG ACGTGCTTGCTAAGCATTTTACTTCGTTAGGTTATGTCGCTTGCGGTGATTATAAGTTCGAGCAGAAAAAACTGATCGCT AAGCATTTTGAACATCCAGACTCGACTCAGCCTAAAGTGTTTATCTCTGAGCTATTAGTTGAAGAATTTAGCCCAGCTCT GCAAGACACCATTCAAGGCTTAATCGCTCAAGTGGATGTTGCTGCGACAACGGCGGACAACTTTATTTACTCGGGTCGCC ATTGGTCTTTAGATTCTAAAACCTATCAGGATTTATTAACTGAGAGCGAATATGCTGCTTGGGTAGCGGCTTTTGGCTAT CGCGCTAACCATTTCACTGTGTCTATCAATCACCTCGATGGTTTTGAAACCTTAGAGTCAGTGAATGATGCACTGAAGCA TGCGGGCTTTGTGCTTAATGGTTCAGGTGGCGAGATCAAAGGTTCGCCAGAAGTGTTATTAGAGCAATCGTCGACTATGG CCGATAAGATTGGCCTTAAATTCACCGATGCAACAGTGGAAATCCCAAGTTGTTTCTATGAGTTTGCGCTGCGTTATCCT ATGGCCAATGGTGAGCTGTATACCGGTTTTGTGGCAGCATCTGCCGACAAGATTTTTGAAAGTACTAACGTGAATAAGGC TTAA
Upstream 100 bases:
>100_bases GTGGGTATGTGTGACGCTGCAACAGTGGCATCTAGGTCGTTACATTTAGTGTTCGCGGCAAAATAACAGCAATAACCGCA GCACAATAAAAGGAGTTTTT
Downstream 100 bases:
>100_bases CGTGAGTAAAGCCTAGCGTCATCAGACATTAAGCATAAAAAACGCCATCAATTCGATGGCGTTTTTTTTATGAGTATTTT AAAGAGGAAATATTAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHTDINALFAALWQDYIQMTPSAAKVHALLGHGKPIINDHIALRTFNIAKVNLDVLAKHFTSLGYVACGDYKFEQKKLIA KHFEHPDSTQPKVFISELLVEEFSPALQDTIQGLIAQVDVAATTADNFIYSGRHWSLDSKTYQDLLTESEYAAWVAAFGY RANHFTVSINHLDGFETLESVNDALKHAGFVLNGSGGEIKGSPEVLLEQSSTMADKIGLKFTDATVEIPSCFYEFALRYP MANGELYTGFVAASADKIFESTNVNKA
Sequences:
>Translated_267_residues MHTDINALFAALWQDYIQMTPSAAKVHALLGHGKPIINDHIALRTFNIAKVNLDVLAKHFTSLGYVACGDYKFEQKKLIA KHFEHPDSTQPKVFISELLVEEFSPALQDTIQGLIAQVDVAATTADNFIYSGRHWSLDSKTYQDLLTESEYAAWVAAFGY RANHFTVSINHLDGFETLESVNDALKHAGFVLNGSGGEIKGSPEVLLEQSSTMADKIGLKFTDATVEIPSCFYEFALRYP MANGELYTGFVAASADKIFESTNVNKA >Mature_267_residues MHTDINALFAALWQDYIQMTPSAAKVHALLGHGKPIINDHIALRTFNIAKVNLDVLAKHFTSLGYVACGDYKFEQKKLIA KHFEHPDSTQPKVFISELLVEEFSPALQDTIQGLIAQVDVAATTADNFIYSGRHWSLDSKTYQDLLTESEYAAWVAAFGY RANHFTVSINHLDGFETLESVNDALKHAGFVLNGSGGEIKGSPEVLLEQSSTMADKIGLKFTDATVEIPSCFYEFALRYP MANGELYTGFVAASADKIFESTNVNKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29460; Mature: 29460
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDINALFAALWQDYIQMTPSAAKVHALLGHGKPIINDHIALRTFNIAKVNLDVLAKHF CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEHHHHHHHHH TSLGYVACGDYKFEQKKLIAKHFEHPDSTQPKVFISELLVEEFSPALQDTIQGLIAQVDV HHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AATTADNFIYSGRHWSLDSKTYQDLLTESEYAAWVAAFGYRANHFTVSINHLDGFETLES HHCCCCCCEECCCEECCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH VNDALKHAGFVLNGSGGEIKGSPEVLLEQSSTMADKIGLKFTDATVEIPSCFYEFALRYP HHHHHHHCCEEEECCCCCCCCCHHHEEECCHHHHHHCCCEEECCEEEHHHHHHHHHHHCC MANGELYTGFVAASADKIFESTNVNKA CCCCCEEEEEEEHHHHHHHHCCCCCCC >Mature Secondary Structure MHTDINALFAALWQDYIQMTPSAAKVHALLGHGKPIINDHIALRTFNIAKVNLDVLAKHF CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEHHHHHHHHH TSLGYVACGDYKFEQKKLIAKHFEHPDSTQPKVFISELLVEEFSPALQDTIQGLIAQVDV HHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AATTADNFIYSGRHWSLDSKTYQDLLTESEYAAWVAAFGYRANHFTVSINHLDGFETLES HHCCCCCCEECCCEECCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH VNDALKHAGFVLNGSGGEIKGSPEVLLEQSSTMADKIGLKFTDATVEIPSCFYEFALRYP HHHHHHHCCEEEECCCCCCCCCHHHEEECCHHHHHHCCCEEECCEEEHHHHHHHHHHHCC MANGELYTGFVAASADKIFESTNVNKA CCCCCEEEEEEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA