| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gltP [H]
Identifier: 160876957
GI number: 160876957
Start: 4536242
End: 4537486
Strand: Reverse
Name: gltP [H]
Synonym: Sbal195_3853
Alternate gene names: 160876957
Gene position: 4537486-4536242 (Counterclockwise)
Preceding gene: 160876958
Following gene: 160876954
Centisome position: 84.86
GC content: 49.96
Gene sequence:
>1245_bases ATGATTAAATCACTTTCGACGCGGATCTTTATAGGTCTGTTTGCGGGTCTTATTTTCGGCACAATAGTGCAGTACTTCTT AAACGATATCGGTTTCTTCTCGGACAATTTGGTCGAGCTTGCCGGCGGCGTTGGCACTATGTTCGTCAATATGATCATGA TGCTAGTCGTGCCATTAGTGTTTGTGAGTATTGTTTGTGGTGTCTGTGAGCTGCAAGATCTCAAAAGTTTTGGCCGTTTA GGCGGTAAGACCTTCGGTTTCTATATCATCAATACCTTTGTCGCGATCGCGACGGCATTATTAGTCGTGCTGTTACTCGA CCCAGGTAAAGGTGTCGATATGAGCAGCACAGACGGCCTGGCCATTACTGCAACTGAGCTGCCAAGTCTGATGGCACTGG TGATCGACATAGTCCCGCGTAACCCTGTGGCGGCGTTTATGTCGGGCAATATGTTGCAAGTGATCTTTATGGCCCTAATG CTTGGCGGCGTGATTAAGTCACTCGGTGAGCATGTCGCTGGCGCTGTGCAAGGTTTTCAAACCGCGAATAAAATCATGAT GAAGCTGATTTCTGTGGTGATGAGCCTAGCGCCCTACGGTGTGTTTGCCTTGATGTTCAAGCTCGGCGCGACCTTAGATG CTGGCGTGTTTATGAGCGTAGTTGAGTACATGGTGCTGATCCTCGCGCTGCTACTACTGTGGATTTTTGTGGTTTACCCA ATGGCGGTGGGCATATTTACCCCAATTTCGGCCAAAACCTTCCGCGAGAAGACCCAAGAGCAAGTGTTGTTTTCACTGTC GACCGCAAGCTCGAATGCGACGATTCCTGTGACTATGCGTACCTTAACCGAAAAGTTAGGTGTGAATCGCGCGGTAGCTG GCTTTGGTGTGCCGCTCGGCGCGACCATGAACATGGGCGGCGTGGCGATTTACATCACGATCGCGATTTTCTTTGTCGCT AACGCCTTTGGCATGCCTATCACCTCTGATCAATTGCCTTCGCTGTTATTTAGCATCTTCCTGCTCTCTGTCGGCGCAGG TGGCGTGCCCGGCGGCGGCATGGTGATGATAGGCGTGTTAATCCATCAAATGGGTTTACCGATAGAAGCCTTCGCCATAG TTGCGGCGTTAGATCGCATTATCGATATGGTGCTGACCTCTTGTAACGTGGTAGGTGATGCTGCGGTATTGACCATAGTG GACCAAACCGAGAAAGTGCATCAGGTTGAACTAGCGAAGAGCTAA
Upstream 100 bases:
>100_bases TGTTTCACTATCCCCTGCCTAAGCCAAAAATGGATTGGCAATTGTGCTCATCATGGAAGATGAATAACAAAAAAACTACA TTTCTGGGGAAACCACAAGC
Downstream 100 bases:
>100_bases TCTGGACGTTAAGTCATATGCTATAAATGCAAAAAGCCACTGTCATCAGTGGCTTTTTTGTTCATATTGATCTATTTAAT GCTGGCTGAGGAGCCTACTG
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MIKSLSTRIFIGLFAGLIFGTIVQYFLNDIGFFSDNLVELAGGVGTMFVNMIMMLVVPLVFVSIVCGVCELQDLKSFGRL GGKTFGFYIINTFVAIATALLVVLLLDPGKGVDMSSTDGLAITATELPSLMALVIDIVPRNPVAAFMSGNMLQVIFMALM LGGVIKSLGEHVAGAVQGFQTANKIMMKLISVVMSLAPYGVFALMFKLGATLDAGVFMSVVEYMVLILALLLLWIFVVYP MAVGIFTPISAKTFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLGATMNMGGVAIYITIAIFFVA NAFGMPITSDQLPSLLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDAAVLTIV DQTEKVHQVELAKS
Sequences:
>Translated_414_residues MIKSLSTRIFIGLFAGLIFGTIVQYFLNDIGFFSDNLVELAGGVGTMFVNMIMMLVVPLVFVSIVCGVCELQDLKSFGRL GGKTFGFYIINTFVAIATALLVVLLLDPGKGVDMSSTDGLAITATELPSLMALVIDIVPRNPVAAFMSGNMLQVIFMALM LGGVIKSLGEHVAGAVQGFQTANKIMMKLISVVMSLAPYGVFALMFKLGATLDAGVFMSVVEYMVLILALLLLWIFVVYP MAVGIFTPISAKTFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLGATMNMGGVAIYITIAIFFVA NAFGMPITSDQLPSLLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDAAVLTIV DQTEKVHQVELAKS >Mature_414_residues MIKSLSTRIFIGLFAGLIFGTIVQYFLNDIGFFSDNLVELAGGVGTMFVNMIMMLVVPLVFVSIVCGVCELQDLKSFGRL GGKTFGFYIINTFVAIATALLVVLLLDPGKGVDMSSTDGLAITATELPSLMALVIDIVPRNPVAAFMSGNMLQVIFMALM LGGVIKSLGEHVAGAVQGFQTANKIMMKLISVVMSLAPYGVFALMFKLGATLDAGVFMSVVEYMVLILALLLLWIFVVYP MAVGIFTPISAKTFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLGATMNMGGVAIYITIAIFFVA NAFGMPITSDQLPSLLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDAAVLTIV DQTEKVHQVELAKS
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=421, Percent_Identity=28.2660332541568, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI40254478, Length=473, Percent_Identity=26.6384778012685, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI169790839, Length=421, Percent_Identity=25.41567695962, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI194239697, Length=417, Percent_Identity=24.9400479616307, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI66773030, Length=265, Percent_Identity=30.5660377358491, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI5032093, Length=387, Percent_Identity=26.8733850129199, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI4827012, Length=239, Percent_Identity=30.5439330543933, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI223468566, Length=271, Percent_Identity=28.0442804428044, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI223468564, Length=262, Percent_Identity=27.8625954198473, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI262359914, Length=365, Percent_Identity=26.027397260274, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI301601644, Length=147, Percent_Identity=36.0544217687075, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1790514, Length=427, Percent_Identity=28.8056206088993, Blast_Score=172, Evalue=4e-44, Organism=Escherichia coli, GI1789947, Length=413, Percent_Identity=26.1501210653753, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1788024, Length=439, Percent_Identity=28.4738041002278, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1789473, Length=402, Percent_Identity=28.6069651741293, Blast_Score=99, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71983106, Length=400, Percent_Identity=28.75, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71983099, Length=400, Percent_Identity=28.75, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17537407, Length=416, Percent_Identity=27.4038461538462, Blast_Score=138, Evalue=4e-33, Organism=Caenorhabditis elegans, GI193206654, Length=425, Percent_Identity=27.0588235294118, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI193206505, Length=442, Percent_Identity=24.8868778280543, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71996953, Length=420, Percent_Identity=26.1904761904762, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17541374, Length=403, Percent_Identity=24.8138957816377, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24583025, Length=433, Percent_Identity=25.1732101616628, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI17137668, Length=433, Percent_Identity=25.1732101616628, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24583023, Length=433, Percent_Identity=25.1732101616628, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI281360481, Length=449, Percent_Identity=23.3853006681514, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI281360483, Length=450, Percent_Identity=23.3333333333333, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI17137666, Length=450, Percent_Identity=23.3333333333333, Blast_Score=92, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43858; Mature: 43858
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSLSTRIFIGLFAGLIFGTIVQYFLNDIGFFSDNLVELAGGVGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH FVSIVCGVCELQDLKSFGRLGGKTFGFYIINTFVAIATALLVVLLLDPGKGVDMSSTDGL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AITATELPSLMALVIDIVPRNPVAAFMSGNMLQVIFMALMLGGVIKSLGEHVAGAVQGFQ EEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TANKIMMKLISVVMSLAPYGVFALMFKLGATLDAGVFMSVVEYMVLILALLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVGIFTPISAKTFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLG HHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHCCCHHHHHCCCCCC ATMNMGGVAIYITIAIFFVANAFGMPITSDQLPSLLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDAAVLTIVDQTEKVHQVELAKS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHCCC >Mature Secondary Structure MIKSLSTRIFIGLFAGLIFGTIVQYFLNDIGFFSDNLVELAGGVGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH FVSIVCGVCELQDLKSFGRLGGKTFGFYIINTFVAIATALLVVLLLDPGKGVDMSSTDGL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AITATELPSLMALVIDIVPRNPVAAFMSGNMLQVIFMALMLGGVIKSLGEHVAGAVQGFQ EEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TANKIMMKLISVVMSLAPYGVFALMFKLGATLDAGVFMSVVEYMVLILALLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVGIFTPISAKTFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLG HHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHCCCHHHHHCCCCCC ATMNMGGVAIYITIAIFFVANAFGMPITSDQLPSLLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDAAVLTIVDQTEKVHQVELAKS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]