| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876954
Identifier: 160876954
GI number: 160876954
Start: 4533766
End: 4534335
Strand: Reverse
Name: 160876954
Synonym: Sbal195_3850
Alternate gene names: NA
Gene position: 4534335-4533766 (Counterclockwise)
Preceding gene: 160876957
Following gene: 160876953
Centisome position: 84.8
GC content: 45.26
Gene sequence:
>570_bases ATGCAACACACATCATTGGATCAACAGTTAATCGAATACCGTCAACAACGTGCTTTGGCTATGCCCTTATCCGGCATGAT AGTGTGGATCTTGCTGTTTGCATTAAGTTTTATGTTATCGCCTTCGCAATTGGTGATGGCGGTATTTATCGGAACGGGTT CAATCGTCTATTTAGCCGTGGGCATTTCTCGGCTAACCGGTGAGAACATGTCGTTCAAGAAAAAGCATGAGCGTAATTGG TTTGATAACGTGTTTTTAGCCGCCGTAGGCATGAGTTTCCTGACCTTTGCTATCAGCATTCCATTCTTTATGGAAAATTA TCTGGCATTGCCTTTCGCCCTTGCGGTGCAGACAGGGTTAATGTGGCTGGTTTATGGCGTGATAGCGGCGCAAAAGGTAG CCATAGTGCATGCCATAGTACGCACTTTGGCCTGTGTTACTGCCTTCATGCTCTGGCCTGAATTGAGCTTTCAAATCCAG CCTTTGATTGTAGTGTGTTGTTATGGGTTCTCTATCCCAGTAATGGAACGCCGTTGGAAGATTCAGCAAAATCTTTGTGT TGCGAGTTAG
Upstream 100 bases:
>100_bases AAAGAGGTGACATTTGTCATCCCTGATTGCTGACAACTCACACTGCCGTGATGGATTGTTAGCGTAGATACTTAAGTCAT CTAAAAAAGGAGGCTTAATC
Downstream 100 bases:
>100_bases TGGTTTAGTTTTCACTGACGTGTACGTGAATAATACGGCCTTACAGCCGAGGTGAATCAAAGTCGTGGGGCTTCACCCCT GACGCTTAATCAAGAGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MQHTSLDQQLIEYRQQRALAMPLSGMIVWILLFALSFMLSPSQLVMAVFIGTGSIVYLAVGISRLTGENMSFKKKHERNW FDNVFLAAVGMSFLTFAISIPFFMENYLALPFALAVQTGLMWLVYGVIAAQKVAIVHAIVRTLACVTAFMLWPELSFQIQ PLIVVCCYGFSIPVMERRWKIQQNLCVAS
Sequences:
>Translated_189_residues MQHTSLDQQLIEYRQQRALAMPLSGMIVWILLFALSFMLSPSQLVMAVFIGTGSIVYLAVGISRLTGENMSFKKKHERNW FDNVFLAAVGMSFLTFAISIPFFMENYLALPFALAVQTGLMWLVYGVIAAQKVAIVHAIVRTLACVTAFMLWPELSFQIQ PLIVVCCYGFSIPVMERRWKIQQNLCVAS >Mature_189_residues MQHTSLDQQLIEYRQQRALAMPLSGMIVWILLFALSFMLSPSQLVMAVFIGTGSIVYLAVGISRLTGENMSFKKKHERNW FDNVFLAAVGMSFLTFAISIPFFMENYLALPFALAVQTGLMWLVYGVIAAQKVAIVHAIVRTLACVTAFMLWPELSFQIQ PLIVVCCYGFSIPVMERRWKIQQNLCVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21337; Mature: 21337
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHTSLDQQLIEYRQQRALAMPLSGMIVWILLFALSFMLSPSQLVMAVFIGTGSIVYLAV CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH GISRLTGENMSFKKKHERNWFDNVFLAAVGMSFLTFAISIPFFMENYLALPFALAVQTGL HHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWLVYGVIAAQKVAIVHAIVRTLACVTAFMLWPELSFQIQPLIVVCCYGFSIPVMERRWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH IQQNLCVAS HHHCCCCCC >Mature Secondary Structure MQHTSLDQQLIEYRQQRALAMPLSGMIVWILLFALSFMLSPSQLVMAVFIGTGSIVYLAV CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHH GISRLTGENMSFKKKHERNWFDNVFLAAVGMSFLTFAISIPFFMENYLALPFALAVQTGL HHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWLVYGVIAAQKVAIVHAIVRTLACVTAFMLWPELSFQIQPLIVVCCYGFSIPVMERRWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH IQQNLCVAS HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA