| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ywrD [H]
Identifier: 160876918
GI number: 160876918
Start: 4494140
End: 4495852
Strand: Reverse
Name: ywrD [H]
Synonym: Sbal195_3814
Alternate gene names: 160876918
Gene position: 4495852-4494140 (Counterclockwise)
Preceding gene: 160876919
Following gene: 160876917
Centisome position: 84.08
GC content: 48.74
Gene sequence:
>1713_bases ATGATAAAAACAATAAAATCAATTTGTACCTTAGTGACAGTGGCGACGGCAATATCGTCTTCAGGAGTGATGGCCATGGA TAGGATCACGGGTAAAGCCTTTGCGACGCGCTCAGAAGTGTATGCCACCCATGGAATGGCGGCGACCAGTCAACCACTCG CCACACAAGTCGCTATTGATATACTCAAGCAGGGCGGTAGTGCGGTCGATGCGGCGATTGCCGCGAATGCCATGCTAGGG TTAGTCGAACCAACGGGTTCGGGTGTTGGTGGTGACTTATTTGCCATCGTCTGGAGCGCGAAAGATAAACGCCTCTATGG TCTTAACGCTTCGGGCCGCAGTCCAAAATCCTTAAGTTTAGAAAAGCTTAAATCTCTCGGCTTAGACTATTTACCGCCGC TTGGACCCTTGCCTGTTTCTGTGCCCGGCGCTGTGGATGGCTGGTATGAACTGCATAATAAGTTCGGCAAATTAGCGATG GCCGATAATCTTGCGCCCGCAATCCATTACGCCCGTGATGGTTTCCCTGTGTCCGAACTCATCGCCTATTACCTTGAGGG GAGTGGTAAAAAACTCGCTAAATTCCCCGGTTTTAAAGAAACCTATATGCCTAATGGCAAGATGCCAGCGGTGGGCGAAA TCTTTAAAAACCCAGCGCTTGCTAATACCTATGAGAAAATTGCCAAGGGTGGCCGCGATGCTTTCTATAAAGGCGATATC GCCAAAAGTATCGATAAGTACATGAAATCCCAAGGTGGTTATTTAAGTTATGATGACTTAGCGAGCCATACTAGCGAATG GATAGATCCGGTTTCGGTGAACTACCGTGGTTACGATGTATGGGAACTGCCGCCCAATGGTCAAGGCATTGCGGCGCTAC AAATCTTAAAAACCATGGAACCCTTTAATGTGGCTGCTATGGGCTTTAATAGCCCCGAATATGTGCATTTATTTGTTGAA GCCAAAAAACTCGCCTTTGCCGACAGAGCTAAGTTTTATGCCGACATGGCCTTTAATAAAGTGCCGGTTAACGATTTGAT TTCGCAGCAATACAATTATGATCGCGCTAAGTTAATCGATCCCAATAAAGCGGCCAAGAGTGTTGATGCGGGTAATCCTG CGTTACAACATGGCGATACTGTATACCTGACCACCGCCGACAAAGACGGCAACATGGTGTCACTCATTCAAAGTAACTAC CGTGGTATGGGTTCAGGAATGACGCCGCCGGATCTCGGTTTTGTGCTGCAAGACCGTGGGCAAATGTTTGATTTAACTGA GGGGCGTTTTAATACCTACGCACCGGGCAAGCGTCCATTTCATACCATCATTCCCGCTTTTGTGACCAAAGACGGTAAAC CTTGGCTCAGCTTTGGGGTGATGGGCGGCGCGACTCAACCACAGATGCACGCGCAGATTCTAATGAACCTGATTGATTTT AAAATGAACTTGCAAGAAGCGGGCGATGCCCCCAGAATTTTGCATATGGGTTCAACTGAGCCCACCGGCGAAGTGATGAA TGACGGCGGCTACGTCAGTCTGGAATCGGGCTTCCCTGTGGAAACGCGCCGTGAGCTTATCAAGAAAGGTCATGTGCTGC GTGATGGACTTGGGGATTTTGGCGGCTATCAAGCTATTGGATTTAATGCTGAAACGGGCGTGTATCGTGGCGCTTCTGAG AGCCGTAAAGATGGTCATGCCGCCGGTTATTAA
Upstream 100 bases:
>100_bases ACGACATTTTTGCTTACGTTTAACTTAGGCCTATGCGGTATTGGTTGGTGATATTTTCGACCATCCTTGTTACCTTAATT TCTCCAGAGTGGGAGGAATT
Downstream 100 bases:
>100_bases CTTCAGCGTCACGCTAAGGTAAGCTTGAGGTAGAGTAAGCTTTGCTGCTCTAATTCGATTAAACTGAATGACGAGACTTT CCAGTCTCGTCATTTTTACA
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLSLEKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAM ADNLAPAIHYARDGFPVSELIAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSEWIDPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVNDLISQQYNYDRAKLIDPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILMNLIDF KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDFGGYQAIGFNAETGVYRGASE SRKDGHAAGY
Sequences:
>Translated_570_residues MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLSLEKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAM ADNLAPAIHYARDGFPVSELIAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSEWIDPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVNDLISQQYNYDRAKLIDPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILMNLIDF KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDFGGYQAIGFNAETGVYRGASE SRKDGHAAGY >Mature_570_residues MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAIDILKQGGSAVDAAIAANAMLG LVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLSLEKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAM ADNLAPAIHYARDGFPVSELIAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI AKSIDKYMKSQGGYLSYDDLASHTSEWIDPVSVNYRGYDVWELPPNGQGIAALQILKTMEPFNVAAMGFNSPEYVHLFVE AKKLAFADRAKFYADMAFNKVPVNDLISQQYNYDRAKLIDPNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNY RGMGSGMTPPDLGFVLQDRGQMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILMNLIDF KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDFGGYQAIGFNAETGVYRGASE SRKDGHAAGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=558, Percent_Identity=27.5985663082437, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI73915090, Length=558, Percent_Identity=27.5985663082437, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI73915096, Length=558, Percent_Identity=27.5985663082437, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI73915094, Length=558, Percent_Identity=27.5985663082437, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI113429324, Length=554, Percent_Identity=25.9927797833935, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI113429326, Length=559, Percent_Identity=25.9391771019678, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI109148539, Length=469, Percent_Identity=26.6524520255864, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI153266885, Length=550, Percent_Identity=24.9090909090909, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI153266901, Length=551, Percent_Identity=24.8638838475499, Blast_Score=120, Evalue=5e-27, Organism=Homo sapiens, GI153266907, Length=550, Percent_Identity=23.8181818181818, Blast_Score=107, Evalue=4e-23, Organism=Escherichia coli, GI1789856, Length=566, Percent_Identity=31.8021201413428, Blast_Score=231, Evalue=1e-61, Organism=Caenorhabditis elegans, GI193208247, Length=520, Percent_Identity=26.7307692307692, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI193208245, Length=520, Percent_Identity=26.7307692307692, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17542894, Length=498, Percent_Identity=26.3052208835341, Blast_Score=135, Evalue=7e-32, Organism=Caenorhabditis elegans, GI212646519, Length=535, Percent_Identity=25.981308411215, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI72000294, Length=535, Percent_Identity=25.981308411215, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17506189, Length=530, Percent_Identity=24.9056603773585, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI45551474, Length=551, Percent_Identity=27.5862068965517, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI161077880, Length=551, Percent_Identity=27.5862068965517, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24642670, Length=551, Percent_Identity=27.5862068965517, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24642666, Length=551, Percent_Identity=27.5862068965517, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI161077878, Length=551, Percent_Identity=27.5862068965517, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI18859893, Length=461, Percent_Identity=25.8134490238612, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI161077496, Length=555, Percent_Identity=24.8648648648649, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI18859741, Length=469, Percent_Identity=24.0938166311301, Blast_Score=124, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 61506; Mature: 61506
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAID CCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ILKQGGSAVDAAIAANAMLGLVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLSL HHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCH EKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAMADNLAPAIHYARDGFPVSEL HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCHHHH IAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI HHHHHCCCCCHHHHCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEECCHH AKSIDKYMKSQGGYLSYDDLASHTSEWIDPVSVNYRGYDVWELPPNGQGIAALQILKTME HHHHHHHHHCCCCEECHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHCC PFNVAAMGFNSPEYVHLFVEAKKLAFADRAKFYADMAFNKVPVNDLISQQYNYDRAKLID CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEC PNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNYRGMGSGMTPPDLGFVLQDRG CCHHHHCCCCCCCCHHCCCEEEEEECCCCCCEEHEEHHCCCCCCCCCCCCCCCHHCCCCC QMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILMNLIDF CEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDF HHCHHHCCCCCEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHCCCHHHHCCCCC GGYQAIGFNAETGVYRGASESRKDGHAAGY CCCEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKTIKSICTLVTVATAISSSGVMAMDRITGKAFATRSEVYATHGMAATSQPLATQVAID CCHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ILKQGGSAVDAAIAANAMLGLVEPTGSGVGGDLFAIVWSAKDKRLYGLNASGRSPKSLSL HHHCCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCH EKLKSLGLDYLPPLGPLPVSVPGAVDGWYELHNKFGKLAMADNLAPAIHYARDGFPVSEL HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHCCCCCHHHH IAYYLEGSGKKLAKFPGFKETYMPNGKMPAVGEIFKNPALANTYEKIAKGGRDAFYKGDI HHHHHCCCCCHHHHCCCCCHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCEECCHH AKSIDKYMKSQGGYLSYDDLASHTSEWIDPVSVNYRGYDVWELPPNGQGIAALQILKTME HHHHHHHHHCCCCEECHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHCC PFNVAAMGFNSPEYVHLFVEAKKLAFADRAKFYADMAFNKVPVNDLISQQYNYDRAKLID CCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEC PNKAAKSVDAGNPALQHGDTVYLTTADKDGNMVSLIQSNYRGMGSGMTPPDLGFVLQDRG CCHHHHCCCCCCCCHHCCCEEEEEECCCCCCEEHEEHHCCCCCCCCCCCCCCCHHCCCCC QMFDLTEGRFNTYAPGKRPFHTIIPAFVTKDGKPWLSFGVMGGATQPQMHAQILMNLIDF CEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH KMNLQEAGDAPRILHMGSTEPTGEVMNDGGYVSLESGFPVETRRELIKKGHVLRDGLGDF HHCHHHCCCCCEEEECCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHCCCHHHHCCCCC GGYQAIGFNAETGVYRGASESRKDGHAAGY CCCEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]