| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876107
Identifier: 160876107
GI number: 160876107
Start: 3565820
End: 3567166
Strand: Direct
Name: 160876107
Synonym: Sbal195_2998
Alternate gene names: NA
Gene position: 3565820-3567166 (Clockwise)
Preceding gene: 160876106
Following gene: 160876108
Centisome position: 66.68
GC content: 49.96
Gene sequence:
>1347_bases ATGCAACATTCATCTAAACCCGTTTTGTTTGCGGCGCTACTGGGCGTGATTTGCACCACGCTGGCCCCAGCTATGGCCAA CGATATCGTACCTACACCTAAACAAAGCAGCAGCGTACTGATTAAAAACGCCACAGTGCACACAGTCAGTCAAGGCGTGC TCAGCAACACTGATGTCTTGATTGAAAATGGCAAGATCACGGCTGTTGGGCCTCAACTCACCAGCCAAGCCAACAGTGCA ACCGCAGAAACCAGTGACACTCCAGTCGTCGATGCCAGCGGTAAACACTTATATCCGGGCTTAATTGCCCTAGACACCAG CTTAGGCTTAGTTGAAATTGAAATGAGCCGCCCCACGGTCGATAACGCCGAGGTGGGTTATATCAACCCGCAAATCAGCA CAGCCACAGCTTACAATGCGGATTCGGAGCTGATCCCGACCATACGGTTCAACGGCATTACCCACGCGCAAATCGTCCCG AGCGGCGATGGTATTGCAGGCCAATCGGTACTGGTGAATCTTGATGCGTGGACGATTGAGGATGCGCTGGCCCCCAGTGC AGGGCAATTCCATATCTATTGGCCGCAAATCAAACGCATGCCAGAAGATGAAAAAGAGAAAACTAAGGCCATCGAGAAAA ATCAGCAGGCGATCGACCAGCTCAATATCGCCTTTGAAGATGGCTATCGCTATTTCTTAAGTGATAAAGCCAAGGGCAAA GATAACAACAAGGATGAAGATCCACAGTCCGCGACCAACAACCTTCGCTGGCAGGCCATGTTGCCGCTATACCAAGGTAA AGCGACACTGTTTGCCCATGCCGACAGTGTTGGCCAAATTGAGCAAGTGATTGCCCTGACGAAAAAATACCAATTCAAAT TGGTGATTGTCGGCGGATACGATGCATGGCGCTTGGCCTCAAGCCTGAGGGAAGTTAAGGCGGGGGTCATTTATCCTCAT ACCTTGAGTCTGCCTAAGCGTAAAGATGAACCAGTAGATTTGCCCTTTAAAATCCCCTCCTTGCTCGCTAATGCAGGAAT TCCCTTCGCCCTTGGGTTCTCATCGGACTGGAATAGCCGTAACTTACCCTATGCAGCAGGTTATAGCGCCGCCTATGGTT TAACGCCTGAGCAAGCGCTTAAGTCCATCACCTTAGATGCAGCAAAACTATTAGGTATCGAGGATTTAGGGGCGATTGCC GTGGGATACCAAGGCAGTGTTGTACTGTCCGAGGGGGACATTCTCGACCCTATGACCAATAAGATAGAGGCTATCTGGAT TGAAGGACGGCAGATAGATCTGAATAATCGCCATCAGCAGCTTTATCAAAAGTACCTTAAGCGGTAG
Upstream 100 bases:
>100_bases AAGCCAAAGCGGGTGAAAAAGTCACGCCACTTAACGAGCCACAGTGGCACTGCGACACCCACTATCAGGCATGGGGCCAC ACTCATGAGGGAGCCAAATA
Downstream 100 bases:
>100_bases AATTTACTCAGATAATAATATCGCATCGGCGCAGCCTACCAAGGCTGCGCAGTTTTCCCCTCAATCTCAGGTCAAACCAT GAAAATTATCCTCTCAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase Superfamily Protein; Imidazolonepropionase; Amidohydrolase Imidazolonepropionase; Imidazolonepropionase And Related Amidohydrolases; Amidohydrolase Protein; Amidohodrolase; Aminohydrolase; Dihydroorotase; Imidazolonepropionase Or Related Amidohydrolase; Secreted Protein
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MQHSSKPVLFAALLGVICTTLAPAMANDIVPTPKQSSSVLIKNATVHTVSQGVLSNTDVLIENGKITAVGPQLTSQANSA TAETSDTPVVDASGKHLYPGLIALDTSLGLVEIEMSRPTVDNAEVGYINPQISTATAYNADSELIPTIRFNGITHAQIVP SGDGIAGQSVLVNLDAWTIEDALAPSAGQFHIYWPQIKRMPEDEKEKTKAIEKNQQAIDQLNIAFEDGYRYFLSDKAKGK DNNKDEDPQSATNNLRWQAMLPLYQGKATLFAHADSVGQIEQVIALTKKYQFKLVIVGGYDAWRLASSLREVKAGVIYPH TLSLPKRKDEPVDLPFKIPSLLANAGIPFALGFSSDWNSRNLPYAAGYSAAYGLTPEQALKSITLDAAKLLGIEDLGAIA VGYQGSVVLSEGDILDPMTNKIEAIWIEGRQIDLNNRHQQLYQKYLKR
Sequences:
>Translated_448_residues MQHSSKPVLFAALLGVICTTLAPAMANDIVPTPKQSSSVLIKNATVHTVSQGVLSNTDVLIENGKITAVGPQLTSQANSA TAETSDTPVVDASGKHLYPGLIALDTSLGLVEIEMSRPTVDNAEVGYINPQISTATAYNADSELIPTIRFNGITHAQIVP SGDGIAGQSVLVNLDAWTIEDALAPSAGQFHIYWPQIKRMPEDEKEKTKAIEKNQQAIDQLNIAFEDGYRYFLSDKAKGK DNNKDEDPQSATNNLRWQAMLPLYQGKATLFAHADSVGQIEQVIALTKKYQFKLVIVGGYDAWRLASSLREVKAGVIYPH TLSLPKRKDEPVDLPFKIPSLLANAGIPFALGFSSDWNSRNLPYAAGYSAAYGLTPEQALKSITLDAAKLLGIEDLGAIA VGYQGSVVLSEGDILDPMTNKIEAIWIEGRQIDLNNRHQQLYQKYLKR >Mature_448_residues MQHSSKPVLFAALLGVICTTLAPAMANDIVPTPKQSSSVLIKNATVHTVSQGVLSNTDVLIENGKITAVGPQLTSQANSA TAETSDTPVVDASGKHLYPGLIALDTSLGLVEIEMSRPTVDNAEVGYINPQISTATAYNADSELIPTIRFNGITHAQIVP SGDGIAGQSVLVNLDAWTIEDALAPSAGQFHIYWPQIKRMPEDEKEKTKAIEKNQQAIDQLNIAFEDGYRYFLSDKAKGK DNNKDEDPQSATNNLRWQAMLPLYQGKATLFAHADSVGQIEQVIALTKKYQFKLVIVGGYDAWRLASSLREVKAGVIYPH TLSLPKRKDEPVDLPFKIPSLLANAGIPFALGFSSDWNSRNLPYAAGYSAAYGLTPEQALKSITLDAAKLLGIEDLGAIA VGYQGSVVLSEGDILDPMTNKIEAIWIEGRQIDLNNRHQQLYQKYLKR
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48656; Mature: 48656
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHSSKPVLFAALLGVICTTLAPAMANDIVPTPKQSSSVLIKNATVHTVSQGVLSNTDVL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEHHHHCCCCCCEEE IENGKITAVGPQLTSQANSATAETSDTPVVDASGKHLYPGLIALDTSLGLVEIEMSRPTV EECCEEEEECCHHHCCCCCCCCCCCCCCEEECCCCEECCCEEEEECCCCEEEEEECCCCC DNAEVGYINPQISTATAYNADSELIPTIRFNGITHAQIVPSGDGIAGQSVLVNLDAWTIE CCCEEEEECCCCCEEEEECCCCCEECEEEECCEEEEEEEECCCCCCCCEEEEEECCEEEH DALAPSAGQFHIYWPQIKRMPEDEKEKTKAIEKNQQAIDQLNIAFEDGYRYFLSDKAKGK HHCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCC DNNKDEDPQSATNNLRWQAMLPLYQGKATLFAHADSVGQIEQVIALTKKYQFKLVIVGGY CCCCCCCHHHHHCCCEEEEECEEECCCEEEEEECCCHHHHHHHHHHHCCEEEEEEEECCC DAWRLASSLREVKAGVIYPHTLSLPKRKDEPVDLPFKIPSLLANAGIPFALGFSSDWNSR HHHHHHHHHHHHHCCEECCEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCC NLPYAAGYSAAYGLTPEQALKSITLDAAKLLGIEDLGAIAVGYQGSVVLSEGDILDPMTN CCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCCCC KIEAIWIEGRQIDLNNRHQQLYQKYLKR CEEEEEEECEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MQHSSKPVLFAALLGVICTTLAPAMANDIVPTPKQSSSVLIKNATVHTVSQGVLSNTDVL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEHHHHCCCCCCEEE IENGKITAVGPQLTSQANSATAETSDTPVVDASGKHLYPGLIALDTSLGLVEIEMSRPTV EECCEEEEECCHHHCCCCCCCCCCCCCCEEECCCCEECCCEEEEECCCCEEEEEECCCCC DNAEVGYINPQISTATAYNADSELIPTIRFNGITHAQIVPSGDGIAGQSVLVNLDAWTIE CCCEEEEECCCCCEEEEECCCCCEECEEEECCEEEEEEEECCCCCCCCEEEEEECCEEEH DALAPSAGQFHIYWPQIKRMPEDEKEKTKAIEKNQQAIDQLNIAFEDGYRYFLSDKAKGK HHCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCC DNNKDEDPQSATNNLRWQAMLPLYQGKATLFAHADSVGQIEQVIALTKKYQFKLVIVGGY CCCCCCCHHHHHCCCEEEEECEEECCCEEEEEECCCHHHHHHHHHHHCCEEEEEEEECCC DAWRLASSLREVKAGVIYPHTLSLPKRKDEPVDLPFKIPSLLANAGIPFALGFSSDWNSR HHHHHHHHHHHHHCCEECCEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCC NLPYAAGYSAAYGLTPEQALKSITLDAAKLLGIEDLGAIAVGYQGSVVLSEGDILDPMTN CCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCCCCC KIEAIWIEGRQIDLNNRHQQLYQKYLKR CEEEEEEECEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA