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The map label for this gene is yliI [H]

Identifier: 160876094

GI number: 160876094

Start: 3542111

End: 3543313

Strand: Direct

Name: yliI [H]

Synonym: Sbal195_2984

Alternate gene names: 160876094

Gene position: 3542111-3543313 (Clockwise)

Preceding gene: 160876093

Following gene: 160876095

Centisome position: 66.24

GC content: 48.88

Gene sequence:

>1203_bases
ATGAAACGGATCACCTTTAAACTATGCAGCTTGAAGCTAAAGACCTTGAAGCTCAGCAGCTTAAGTCTTGCCCTGTGTCT
TGTTGCAAGCTCGCCCGCTATTTACGCGCAAACTGCTAGCGCAACAAGCATTAGCGTCAAAACGGAAACGGGTAACATTC
AGGTAAAAACCATAGCCCAAGGGTTAGAAAATGTCTGGGGTATGGCATTTTTACCCGACGGCAGCATGCTCGTGACTGAA
CGCGCCGGCAGAATGCGCATTGTCAGCGCCGCAGGTAAAGTGGGCGAACCCTTAACGGGTTTACCACCACTATATGCCAA
AGGCCAAGGTGGTTTACTCGATGTGGTGCTTGCGCCAGATTTTGCCAGCAGCAAAAAAATCTATTTCAGTTATGCCGAAC
CCGCTGAAGGTAGTGCAAGCGATCTCAATAGTACCGCGGTGAGCTTTGCCACGCTTAATGGCAACAAGCTTGAAAATCTC
AGCCGCGTTTTTAGTCAGCAACCTAAAATCAACAGCGGCCACCATTTTGGATCTCGTTTGGTGTGGGCGCCTGACGGCAC
GCTGTTTATTACGCTTGGCGACCGCTACAGCGAAAAAGATAGCGCCCAAACATTAGACAATCATTTAGGCAAAGTGGTGC
GGATTAATGCCGATGGTTCTGTGCCTCAAGATAACCCCTTCGTTAATACGGCGGGCGCTTTGCCCGAGATCTGGTCTATC
GGTCATCGCAATATGCAAGGCGCGGCCATTAATCCCACCAGCAAAGTATTATGGACGGGTGAGCATGGACCGCAGGGCGG
CGATGAACTCAACATTGATGAGGCGGGCAAAAACTATGGCTGGCCTGTGATTACCTATGGTGAGAATTACGGCGGCGGCA
AAATCAGCGAAGGCACCCACAAGGCTGGAATGGAGCAACCCGTCTACAAATGGGTTCCCTCAATTGCCACGGCGGGCTTT
ATATTTTACACGGGTGACAAATTTCCGCAGTGGCAAAATAATATTTTACTCGCCAGCCTAAAGGAAAAAACGCTAGTACG
TTTAGTGCTTGATGGCGACAAGATTATTAAAGAAGAACGGCTGCTGAAAAATGAATTGGGGCAAAGATTACGCTCAGTCG
TGCAAGGGCCTGATGGGCTGATTTATCTTGTGACTGATGAAGCGAAATCAAAAATTTACCAGATCTCACCGCAGCAATCT
TAA

Upstream 100 bases:

>100_bases
AGTGAGCTTCGATACAAGGTCACATCGAGAAATTGCCCTTAGGTTACTGGCTTGTTACTCTGAGCCATCATTTAGGAAAG
CACTGTGACTAAGGATAGCG

Downstream 100 bases:

>100_bases
GCACTCGCTTTAACCACAGCCTGTTAACCAGTGCAACAAGCTCAATGGTGGGAGAAAAATAAAGTTCGATATTGAATCGT
CACATGTGCTTGATTCTACT

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKRITFKLCSLKLKTLKLSSLSLALCLVASSPAIYAQTASATSISVKTETGNIQVKTIAQGLENVWGMAFLPDGSMLVTE
RAGRMRIVSAAGKVGEPLTGLPPLYAKGQGGLLDVVLAPDFASSKKIYFSYAEPAEGSASDLNSTAVSFATLNGNKLENL
SRVFSQQPKINSGHHFGSRLVWAPDGTLFITLGDRYSEKDSAQTLDNHLGKVVRINADGSVPQDNPFVNTAGALPEIWSI
GHRNMQGAAINPTSKVLWTGEHGPQGGDELNIDEAGKNYGWPVITYGENYGGGKISEGTHKAGMEQPVYKWVPSIATAGF
IFYTGDKFPQWQNNILLASLKEKTLVRLVLDGDKIIKEERLLKNELGQRLRSVVQGPDGLIYLVTDEAKSKIYQISPQQS

Sequences:

>Translated_400_residues
MKRITFKLCSLKLKTLKLSSLSLALCLVASSPAIYAQTASATSISVKTETGNIQVKTIAQGLENVWGMAFLPDGSMLVTE
RAGRMRIVSAAGKVGEPLTGLPPLYAKGQGGLLDVVLAPDFASSKKIYFSYAEPAEGSASDLNSTAVSFATLNGNKLENL
SRVFSQQPKINSGHHFGSRLVWAPDGTLFITLGDRYSEKDSAQTLDNHLGKVVRINADGSVPQDNPFVNTAGALPEIWSI
GHRNMQGAAINPTSKVLWTGEHGPQGGDELNIDEAGKNYGWPVITYGENYGGGKISEGTHKAGMEQPVYKWVPSIATAGF
IFYTGDKFPQWQNNILLASLKEKTLVRLVLDGDKIIKEERLLKNELGQRLRSVVQGPDGLIYLVTDEAKSKIYQISPQQS
>Mature_400_residues
MKRITFKLCSLKLKTLKLSSLSLALCLVASSPAIYAQTASATSISVKTETGNIQVKTIAQGLENVWGMAFLPDGSMLVTE
RAGRMRIVSAAGKVGEPLTGLPPLYAKGQGGLLDVVLAPDFASSKKIYFSYAEPAEGSASDLNSTAVSFATLNGNKLENL
SRVFSQQPKINSGHHFGSRLVWAPDGTLFITLGDRYSEKDSAQTLDNHLGKVVRINADGSVPQDNPFVNTAGALPEIWSI
GHRNMQGAAINPTSKVLWTGEHGPQGGDELNIDEAGKNYGWPVITYGENYGGGKISEGTHKAGMEQPVYKWVPSIATAGF
IFYTGDKFPQWQNNILLASLKEKTLVRLVLDGDKIIKEERLLKNELGQRLRSVVQGPDGLIYLVTDEAKSKIYQISPQQS

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936953, Length=257, Percent_Identity=25.6809338521401, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI187936955, Length=257, Percent_Identity=25.6809338521401, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI124248546, Length=333, Percent_Identity=23.1231231231231, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI20143973, Length=232, Percent_Identity=25, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI1787060, Length=377, Percent_Identity=44.2970822281167, Blast_Score=325, Evalue=3e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 43227; Mature: 43227

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRITFKLCSLKLKTLKLSSLSLALCLVASSPAIYAQTASATSISVKTETGNIQVKTIAQ
CCEEEEEEEEEEEEEEEECHHEEEEEEEECCCEEEEECCCCEEEEEEECCCCEEEHHHHH
GLENVWGMAFLPDGSMLVTERAGRMRIVSAAGKVGEPLTGLPPLYAKGQGGLLDVVLAPD
HHHHHCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECCC
FASSKKIYFSYAEPAEGSASDLNSTAVSFATLNGNKLENLSRVFSQQPKINSGHHFGSRL
CCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEE
VWAPDGTLFITLGDRYSEKDSAQTLDNHLGKVVRINADGSVPQDNPFVNTAGALPEIWSI
EECCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCHHHHHC
GHRNMQGAAINPTSKVLWTGEHGPQGGDELNIDEAGKNYGWPVITYGENYGGGKISEGTH
CCCCCCCCEECCCCEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCH
KAGMEQPVYKWVPSIATAGFIFYTGDKFPQWQNNILLASLKEKTLVRLVLDGDKIIKEER
HCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHH
LLKNELGQRLRSVVQGPDGLIYLVTDEAKSKIYQISPQQS
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCC
>Mature Secondary Structure
MKRITFKLCSLKLKTLKLSSLSLALCLVASSPAIYAQTASATSISVKTETGNIQVKTIAQ
CCEEEEEEEEEEEEEEEECHHEEEEEEEECCCEEEEECCCCEEEEEEECCCCEEEHHHHH
GLENVWGMAFLPDGSMLVTERAGRMRIVSAAGKVGEPLTGLPPLYAKGQGGLLDVVLAPD
HHHHHCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEECCCCCEEEEEECCC
FASSKKIYFSYAEPAEGSASDLNSTAVSFATLNGNKLENLSRVFSQQPKINSGHHFGSRL
CCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEE
VWAPDGTLFITLGDRYSEKDSAQTLDNHLGKVVRINADGSVPQDNPFVNTAGALPEIWSI
EECCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCHHHHHC
GHRNMQGAAINPTSKVLWTGEHGPQGGDELNIDEAGKNYGWPVITYGENYGGGKISEGTH
CCCCCCCCEECCCCEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCH
KAGMEQPVYKWVPSIATAGFIFYTGDKFPQWQNNILLASLKEKTLVRLVLDGDKIIKEER
HCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHH
LLKNELGQRLRSVVQGPDGLIYLVTDEAKSKIYQISPQQS
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]