| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gltX [H]
Identifier: 160876057
GI number: 160876057
Start: 3497015
End: 3498424
Strand: Reverse
Name: gltX [H]
Synonym: Sbal195_2947
Alternate gene names: 160876057
Gene position: 3498424-3497015 (Counterclockwise)
Preceding gene: 160876064
Following gene: 160876055
Centisome position: 65.42
GC content: 45.04
Gene sequence:
>1410_bases ATGACAACTAAGACGCGTTTTGCCCCTAGTCCTACTGGTTTCTTACATGTTGGTGGTGCCCGTACTGCACTTTATTCTTG GTTACAAGCTCGTGCCAATAACGGTGAGTTTGTATTACGTATTGAAGACACTGATATTGAGCGTTCGACTCAAGCCGCCT GCGATGCGATTTTAGAAGGTATGAACTGGTTAGGTTTGACATGGGACGAGGGCCCGTATTACCAAACTAAGCGTTTTGAT CGTTATAACGAAATCATTGCCCAAATGTTAGCAAAGGGCACTGCATACAAATGCTATTGCTCACGTGAGCGCATTGATGC GTTAAGAGAAGCACAAGCCGCCAACGGTGAAGCACAAAAGTACGATGGTTGCTGCCGTGACTTACCCGCTCGTGATACTG ATGAGCCATTTGTCGTGCGTTTCAAAAATCCTATCGGCGGTTCAGTGGTATTTGATGACCATGTTCGTGGCCGTATCGAA TTTTCAAACGATGCATTAGATGACTTGATCATCGCCCGTACCGATGGTGTGCCAACCTATAACTTCTGTGTGGTCGTTGA CGATTGGGATATGGGAATTACCTGTGTGGTTCGTGGTGAAGATCATATCAACAATACGCCGCGTCAAATCAATATCCTTA AAGCATTAGGGGCGCCGATCCCAGAATATGCTCACGTCTCTATGATTCTCGGTGATGATGGCGCGAAATTATCTAAGCGT CATGGCGCAGTGAGCGTAATGCAGTACCGTGACGATGGCTATTTGCCAGAAGCACTGTTGAACTACTTAGTGCGTTTAGG TTGGTCACATGGCGACCAAGAGATCTTCTCCTTAGAAGAAATGAAGCAATACTTTAAGCTCGGTGATATCAATAAAGCCG CTTCTGCCTTTAATACCGATAAACTGGTGTGGTTGAACCAACACTATATAAAGAGTCTTGCCCCAGAATATGTAGCGACA CACTTACAATGGCACATGGACGATCAAAAAATTGATTTGTCAAACGGCCCAGCATTAGCGGAAGTGGTTACGGCATTAGC TGAACGCGCTAAGACACTAAAAGAGTTAGCGGCTTCTAGCCGCTATTTCTATGAAGACTTTGCAGAGTTTGATGAGGCCC AAGCGAAAAAGCATTTACGTGGTGTTGCGTTAGAGCCATTGCAACTGGTTCAACAAAAATTAGCCGCATTAACTGAGTGG ACTGTAGAAGCTATCCATCAGGCGATTGAAGACACTGCAACAGAATTAGATGTGGGTATGGGCAAGGTTGGTATGCCTTT ACGTGTCGCTGTAACAGGGGCAGGGCAGTCACCAGGCCTTGATATCACATTATTTTTAATCGGAAGAAGCCGTTCTGAGC AAAGAATATCCAAAGCGATTGAATTTGTAGCAGATAGAATAAATTCCTAA
Upstream 100 bases:
>100_bases TTGTCCCATTTGCAGCGCCTGCTTTGACTGTTAGAATAAGCCCACTTTTTTATCGTGATTGTCTTTATCTAGACGACTTT ATATAGGTTAGTGTCCCATT
Downstream 100 bases:
>100_bases AAAACGAGTTGACACTTTTAGGTGCGCTGCATAGAATGCGCCACGCAGTTGAGACACAGACGAGCAAATGCTTGTAGTGC ACTTAAATGTACTTTAATAA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTTKTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEGMNWLGLTWDEGPYYQTKRFD RYNEIIAQMLAKGTAYKCYCSRERIDALREAQAANGEAQKYDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIE FSNDALDDLIIARTDGVPTYNFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKR HGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSLEEMKQYFKLGDINKAASAFNTDKLVWLNQHYIKSLAPEYVAT HLQWHMDDQKIDLSNGPALAEVVTALAERAKTLKELAASSRYFYEDFAEFDEAQAKKHLRGVALEPLQLVQQKLAALTEW TVEAIHQAIEDTATELDVGMGKVGMPLRVAVTGAGQSPGLDITLFLIGRSRSEQRISKAIEFVADRINS
Sequences:
>Translated_469_residues MTTKTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEGMNWLGLTWDEGPYYQTKRFD RYNEIIAQMLAKGTAYKCYCSRERIDALREAQAANGEAQKYDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIE FSNDALDDLIIARTDGVPTYNFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKR HGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSLEEMKQYFKLGDINKAASAFNTDKLVWLNQHYIKSLAPEYVAT HLQWHMDDQKIDLSNGPALAEVVTALAERAKTLKELAASSRYFYEDFAEFDEAQAKKHLRGVALEPLQLVQQKLAALTEW TVEAIHQAIEDTATELDVGMGKVGMPLRVAVTGAGQSPGLDITLFLIGRSRSEQRISKAIEFVADRINS >Mature_468_residues TTKTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEGMNWLGLTWDEGPYYQTKRFDR YNEIIAQMLAKGTAYKCYCSRERIDALREAQAANGEAQKYDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIEF SNDALDDLIIARTDGVPTYNFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKRH GAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSLEEMKQYFKLGDINKAASAFNTDKLVWLNQHYIKSLAPEYVATH LQWHMDDQKIDLSNGPALAEVVTALAERAKTLKELAASSRYFYEDFAEFDEAQAKKHLRGVALEPLQLVQQKLAALTEWT VEAIHQAIEDTATELDVGMGKVGMPLRVAVTGAGQSPGLDITLFLIGRSRSEQRISKAIEFVADRINS
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=332, Percent_Identity=33.7349397590361, Blast_Score=204, Evalue=1e-52, Organism=Escherichia coli, GI1788743, Length=469, Percent_Identity=73.3475479744137, Blast_Score=725, Evalue=0.0, Organism=Escherichia coli, GI226510925, Length=242, Percent_Identity=39.2561983471074, Blast_Score=164, Evalue=9e-42, Organism=Escherichia coli, GI1786895, Length=218, Percent_Identity=24.7706422018349, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71993394, Length=481, Percent_Identity=30.1455301455301, Blast_Score=203, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6324540, Length=500, Percent_Identity=31.8, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6321192, Length=229, Percent_Identity=27.9475982532751, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324742, Length=120, Percent_Identity=31.6666666666667, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24665321, Length=492, Percent_Identity=29.8780487804878, Blast_Score=238, Evalue=5e-63,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 52467; Mature: 52336
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEG CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC MNWLGLTWDEGPYYQTKRFDRYNEIIAQMLAKGTAYKCYCSRERIDALREAQAANGEAQK CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCHH YDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIEFSNDALDDLIIARTDGVPTY HCCHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEECCCCHHHEEEEECCCCCCE NFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKR EEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHH HGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSLEEMKQYFKLGDINKAASAFNTD CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC KLVWLNQHYIKSLAPEYVATHLQWHMDDQKIDLSNGPALAEVVTALAERAKTLKELAASS EEEEECHHHHHHHCHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC RYFYEDFAEFDEAQAKKHLRGVALEPLQLVQQKLAALTEWTVEAIHQAIEDTATELDVGM CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKVGMPLRVAVTGAGQSPGLDITLFLIGRSRSEQRISKAIEFVADRINS CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTKTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEG CCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC MNWLGLTWDEGPYYQTKRFDRYNEIIAQMLAKGTAYKCYCSRERIDALREAQAANGEAQK CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCHH YDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIEFSNDALDDLIIARTDGVPTY HCCHHHCCCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEECCCCHHHEEEEECCCCCCE NFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKR EEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHH HGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSLEEMKQYFKLGDINKAASAFNTD CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCC KLVWLNQHYIKSLAPEYVATHLQWHMDDQKIDLSNGPALAEVVTALAERAKTLKELAASS EEEEECHHHHHHHCHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC RYFYEDFAEFDEAQAKKHLRGVALEPLQLVQQKLAALTEWTVEAIHQAIEDTATELDVGM CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GKVGMPLRVAVTGAGQSPGLDITLFLIGRSRSEQRISKAIEFVADRINS CCCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA