Click here to switch to the map view.

The map label for this gene is 160876023

Identifier: 160876023

GI number: 160876023

Start: 3458842

End: 3459546

Strand: Reverse

Name: 160876023

Synonym: Sbal195_2913

Alternate gene names: NA

Gene position: 3459546-3458842 (Counterclockwise)

Preceding gene: 160876024

Following gene: 160876022

Centisome position: 64.7

GC content: 53.33

Gene sequence:

>705_bases
ATGACATCACCCGCCCATAAACGCTTTCATGGTGTTTTAGCGGCAGCGCGGGGAACGGATTCCCCCTTAAGCGCTCGCTC
CGAAAACACCTACGAGCTCATGCTCATGCAGCTTACCGAACATCGTCGCATCTTAAAAACGGTGCAGGCGCTCGCACGTA
AGCTGCAGGCCAAATCGCAGTTCTTGCCAGAATATGATGCCTATATCGATGGCACCATTAAGGGCGACAGTGGCGTGCAG
GATGAAGTATTCGTGACTGTGCTGCTGTGGCATATCGACGTTGGCAACATCGACCGCGCCATTGAGCTGGCCGCATACGC
GCTTAAGCATGATTTGGTTATGCCTGACCGCTTTGAGCGCAATCTGGCTTGCACCATCGCCGAAGAAATTGCCGAAACCG
CCGCGCGCGTGATTGAAACCGAAACACCGGTAGCCAGTTCGCAGCTAAAAGCTGTGCTTGAGCTTACGGCCGAGTGCGAC
ATGTACGACGAAGCGCGCGCTAAGTTGCTGCGTCAAATGGGGCAAGCATTTGAAGCTGAAGGCGAGTTAACCGCTGCGCT
CGACGCCTATCAACAAGCATTGGCCCTAAACGATAAAGTGGGCGTGAAGAAGTTTATCGAGAAAGTCACTCGTGATCTTA
AGAACGCCGACAAACAAACGACCGAAAGCACTGAGCCCACAGAATCACAAGGCAGTGCTGGTTAA

Upstream 100 bases:

>100_bases
GCGATCAAATCGAAAACTACGAATCATCAAACGATGCCTATGTAGTTGAAGATTATGGCTGCACTGCGTTTGCCGAAAAC
ATTGAGATGGGAGCATAACC

Downstream 100 bases:

>100_bases
CCGAGCGACCCTCGCAACCCGTGCGGCGCTGGCCAAGTAGCGTTATCTAATTTCACTACTTAAGCCAGCCCACCGCACAA
CCTAGCCGCAAGCAGGTAAA

Product: small terminase subunit

Products: NA

Alternate protein names: Small Terminase Subunit; Terminase Endonuclease Subunit; Phage Terminase; Phage Terminase/Endonuclease Subunit; Phage Terminase Endonuclease Small Subunit M; Prophage Small Terminase Subunit; Terminase-Like Protein; Gp1 Phage Terminase Endonuclease Subunit; R Protein; Phage Terminase Endonuclease Subunit; Terminase; Bacteriophage Protein; Phage R Protein; Terminase Small Subunit; Bacteriophage-Related Terminase; Phage P2 Small Terminase Subunit GpM-Like Protein; Bacteriophage Terminase Small Subunit; Phage-Related Terminase

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTSPAHKRFHGVLAAARGTDSPLSARSENTYELMLMQLTEHRRILKTVQALARKLQAKSQFLPEYDAYIDGTIKGDSGVQ
DEVFVTVLLWHIDVGNIDRAIELAAYALKHDLVMPDRFERNLACTIAEEIAETAARVIETETPVASSQLKAVLELTAECD
MYDEARAKLLRQMGQAFEAEGELTAALDAYQQALALNDKVGVKKFIEKVTRDLKNADKQTTESTEPTESQGSAG

Sequences:

>Translated_234_residues
MTSPAHKRFHGVLAAARGTDSPLSARSENTYELMLMQLTEHRRILKTVQALARKLQAKSQFLPEYDAYIDGTIKGDSGVQ
DEVFVTVLLWHIDVGNIDRAIELAAYALKHDLVMPDRFERNLACTIAEEIAETAARVIETETPVASSQLKAVLELTAECD
MYDEARAKLLRQMGQAFEAEGELTAALDAYQQALALNDKVGVKKFIEKVTRDLKNADKQTTESTEPTESQGSAG
>Mature_233_residues
TSPAHKRFHGVLAAARGTDSPLSARSENTYELMLMQLTEHRRILKTVQALARKLQAKSQFLPEYDAYIDGTIKGDSGVQD
EVFVTVLLWHIDVGNIDRAIELAAYALKHDLVMPDRFERNLACTIAEEIAETAARVIETETPVASSQLKAVLELTAECDM
YDEARAKLLRQMGQAFEAEGELTAALDAYQQALALNDKVGVKKFIEKVTRDLKNADKQTTESTEPTESQGSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25857; Mature: 25725

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPAHKRFHGVLAAARGTDSPLSARSENTYELMLMQLTEHRRILKTVQALARKLQAKSQ
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPEYDAYIDGTIKGDSGVQDEVFVTVLLWHIDVGNIDRAIELAAYALKHDLVMPDRFER
CCCCHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCC
NLACTIAEEIAETAARVIETETPVASSQLKAVLELTAECDMYDEARAKLLRQMGQAFEAE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
GELTAALDAYQQALALNDKVGVKKFIEKVTRDLKNADKQTTESTEPTESQGSAG
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSPAHKRFHGVLAAARGTDSPLSARSENTYELMLMQLTEHRRILKTVQALARKLQAKSQ
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPEYDAYIDGTIKGDSGVQDEVFVTVLLWHIDVGNIDRAIELAAYALKHDLVMPDRFER
CCCCHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCC
NLACTIAEEIAETAARVIETETPVASSQLKAVLELTAECDMYDEARAKLLRQMGQAFEAE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
GELTAALDAYQQALALNDKVGVKKFIEKVTRDLKNADKQTTESTEPTESQGSAG
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA