| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876022
Identifier: 160876022
GI number: 160876022
Start: 3458279
End: 3458740
Strand: Reverse
Name: 160876022
Synonym: Sbal195_2912
Alternate gene names: NA
Gene position: 3458740-3458279 (Counterclockwise)
Preceding gene: 160876023
Following gene: 160876021
Centisome position: 64.68
GC content: 50.0
Gene sequence:
>462_bases ATGAGTTTTATCGCCCCAGCACCAAGCAGCGCCCCCAAAACCATCACTAACAGTGAGTTTTGGCCTGATATTGATTTAGC TAAGCTGCGCGAGGCCATGCGCCTTGATGGCACTGTGACCAATGAGCGGCTTGAGCACTCCGCAATCAATGCAGCACTGC AGACAAACAGTGATCTCAAGGATTGGCGTATCGAGCAGCAAATCTTGGGCTTTGACGGTTTAGAACAGGTGCCAGCCGAG CAAATCAACGGCCAGAGCATTTATTTGCAATTGTATTTACGTGCTGTGTACTGCCTAGCCAAAGCCAATCTTATTGAGCG TTATAGCGATTTTGATAGCACGGCTAAGGGGCTAAAGGCGGGTGAAGTGCTCGGCGATAGCGTTGACGATCTTCGCCGTG ATGCACGCTTTGCTATTCGCGACATCTTAGGCGAAAGCCATGTCACGGTGGAACTCATTTAA
Upstream 100 bases:
>100_bases CGAGCGACCCTCGCAACCCGTGCGGCGCTGGCCAAGTAGCGTTATCTAATTTCACTACTTAAGCCAGCCCACCGCACAAC CTAGCCGCAAGCAGGTAAAC
Downstream 100 bases:
>100_bases TGAGTAGCTTGCAGGCAGTGCGCAGCATCGAGGGCGATACCGTCGATAAGATTTGTTATCGATACCTTGGGGCAACGGCT GAAATCACTGAGCAAGTGTT
Product: head completion protein
Products: NA
Alternate protein names: Phage Head Completion; Head Completion/Stabilization Protein; Capsid Completion Protein; Phage Head Completion Protein; Phage Head Completion/Stabilization Protein; Bacteriophage Protein; Fels-2 Prophage Protein; Head Completion/Stabilization Protein L; Bacteriophage Head Completion Protein L; Phage P2 Capsid Completion GpL-Like Protein; Phage-Related Capsid Completion Protein; Phage Head Completion Protein L; Phage-Related Head Completion/Stabilization Protein; Prophage Phage Head Completion Protein; Bacteriophage P2 GPL Capsid Protein; Phage Head Completion Protein GpL
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSFIAPAPSSAPKTITNSEFWPDIDLAKLREAMRLDGTVTNERLEHSAINAALQTNSDLKDWRIEQQILGFDGLEQVPAE QINGQSIYLQLYLRAVYCLAKANLIERYSDFDSTAKGLKAGEVLGDSVDDLRRDARFAIRDILGESHVTVELI
Sequences:
>Translated_153_residues MSFIAPAPSSAPKTITNSEFWPDIDLAKLREAMRLDGTVTNERLEHSAINAALQTNSDLKDWRIEQQILGFDGLEQVPAE QINGQSIYLQLYLRAVYCLAKANLIERYSDFDSTAKGLKAGEVLGDSVDDLRRDARFAIRDILGESHVTVELI >Mature_152_residues SFIAPAPSSAPKTITNSEFWPDIDLAKLREAMRLDGTVTNERLEHSAINAALQTNSDLKDWRIEQQILGFDGLEQVPAEQ INGQSIYLQLYLRAVYCLAKANLIERYSDFDSTAKGLKAGEVLGDSVDDLRRDARFAIRDILGESHVTVELI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17081; Mature: 16950
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIAPAPSSAPKTITNSEFWPDIDLAKLREAMRLDGTVTNERLEHSAINAALQTNSDLK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH DWRIEQQILGFDGLEQVPAEQINGQSIYLQLYLRAVYCLAKANLIERYSDFDSTAKGLKA HHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEVLGDSVDDLRRDARFAIRDILGESHVTVELI HHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure SFIAPAPSSAPKTITNSEFWPDIDLAKLREAMRLDGTVTNERLEHSAINAALQTNSDLK CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH DWRIEQQILGFDGLEQVPAEQINGQSIYLQLYLRAVYCLAKANLIERYSDFDSTAKGLKA HHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEVLGDSVDDLRRDARFAIRDILGESHVTVELI HHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA